RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 C5orf67F2Z3F1 127 aa20.43■□□□□ 0.86
CXCL12-204ENST00000395793 MSH4O15457 936 aa20.43■□□□□ 0.86
CXCL12-204ENST00000395793 GATMP50440 423 aa20.43■□□□□ 0.86
CXCL12-204ENST00000395793 NLRP5P59047 1200 aa20.43■□□□□ 0.86
CXCL12-204ENST00000395793 STK3Q13188 491 aa20.43■□□□□ 0.86
CXCL12-204ENST00000395793 TRMT1LQ7Z2T5 733 aaKnown RBP20.43■□□□□ 0.86
CXCL12-204ENST00000395793 SMAP1Q8IYB5 467 aaPredicted RBP20.43■□□□□ 0.86
CXCL12-204ENST00000395793 NME8Q8N427 588 aa20.43■□□□□ 0.86
CXCL12-204ENST00000395793 CLP1Q92989 425 aaKnown RBP20.43■□□□□ 0.86
CXCL12-204ENST00000395793 PPP1R16BQ96T49 567 aa20.43■□□□□ 0.86
CXCL12-204ENST00000395793 ERVK-5Q9HDB9 667 aa20.43■□□□□ 0.86
CXCL12-204ENST00000395793 GABBR1Q9UBS5 961 aa20.43■□□□□ 0.86
CXCL12-204ENST00000395793 NOC2LQ9Y3T9 749 aaKnown RBP20.43■□□□□ 0.86
CXCL12-204ENST00000395793 M0R2N6 131 aa20.42■□□□□ 0.86
CXCL12-204ENST00000395793 GRM6O15303 877 aa20.42■□□□□ 0.86
CXCL12-204ENST00000395793 ZNF862O60290 1169 aa20.42■□□□□ 0.86
CXCL12-204ENST00000395793 MGEA5O60502 916 aa20.42■□□□□ 0.86
CXCL12-204ENST00000395793 DTNBO60941 627 aa20.42■□□□□ 0.86
CXCL12-204ENST00000395793 PSAPP07602 524 aa20.42■□□□□ 0.86
CXCL12-204ENST00000395793 BMPR1AP36894 532 aa20.42■□□□□ 0.86
CXCL12-204ENST00000395793 SSRP1Q08945 709 aaKnown RBP20.42■□□□□ 0.86
CXCL12-204ENST00000395793 UGCGQ16739 394 aa20.42■□□□□ 0.86
CXCL12-204ENST00000395793 NPAS4Q8IUM7 802 aa20.42■□□□□ 0.86
CXCL12-204ENST00000395793 TBCKQ8TEA7 893 aa20.42■□□□□ 0.86
CXCL12-204ENST00000395793 BBXQ8WY36 941 aaPredicted RBP20.42■□□□□ 0.86
CXCL12-204ENST00000395793 SLC5A5Q92911 643 aa20.42■□□□□ 0.86
CXCL12-204ENST00000395793 FTHL17Q9BXU8 183 aa20.42■□□□□ 0.86
CXCL12-204ENST00000395793 PCDHA4Q9UN74 947 aa20.42■□□□□ 0.86
CXCL12-204ENST00000395793 GINS2Q9Y248 185 aa20.42■□□□□ 0.86
CXCL12-204ENST00000395793 PCDHA10Q9Y5I2 948 aa20.42■□□□□ 0.86
CXCL12-204ENST00000395793 MRPL42Q9Y6G3 142 aaKnown RBP20.42■□□□□ 0.86
CXCL12-204ENST00000395793 DEXIO95424 95 aa20.41■□□□□ 0.86
CXCL12-204ENST00000395793 TDP2O95551 362 aa20.41■□□□□ 0.86
CXCL12-204ENST00000395793 BTG3Q14201 252 aaPredicted RBP20.41■□□□□ 0.86
CXCL12-204ENST00000395793 PTPROQ16827 1216 aa20.41■□□□□ 0.86
CXCL12-204ENST00000395793 TIGD5Q53EQ6 642 aa20.41■□□□□ 0.86
CXCL12-204ENST00000395793 TCEAL5Q5H9L2 206 aa20.41■□□□□ 0.86
CXCL12-204ENST00000395793 CKAP2LQ8IYA6 745 aa20.41■□□□□ 0.86
CXCL12-204ENST00000395793 TRIM22Q8IYM9 498 aa20.41■□□□□ 0.86
CXCL12-204ENST00000395793 BANK1Q8NDB2 785 aa20.41■□□□□ 0.86
CXCL12-204ENST00000395793 UNC45AQ9H3U1 944 aa20.41■□□□□ 0.86
CXCL12-204ENST00000395793 PDRG1Q9NUG6 133 aa20.41■□□□□ 0.86
CXCL12-204ENST00000395793 PLXNA4Q9HCM2 1894 aa20.41■□□□□ 0.86
CXCL12-204ENST00000395793 WDR64B1ANS9 1081 aa20.4■□□□□ 0.86
CXCL12-204ENST00000395793 VTNP04004 478 aa20.4■□□□□ 0.86
CXCL12-204ENST00000395793 KCNA5P22460 613 aa20.4■□□□□ 0.86
CXCL12-204ENST00000395793 USP11P51784 963 aa20.4■□□□□ 0.86
CXCL12-204ENST00000395793 NFX1Q12986 1120 aaKnown RBP20.4■□□□□ 0.86
CXCL12-204ENST00000395793 KIZQ2M2Z5 673 aa20.4■□□□□ 0.86
CXCL12-204ENST00000395793 LINC01465Q8N7H1 131 aa20.4■□□□□ 0.86
CXCL12-204ENST00000395793 DAGLBQ8NCG7 672 aa20.4■□□□□ 0.86
CXCL12-204ENST00000395793 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.4■□□□□ 0.86
CXCL12-204ENST00000395793 CPLX1O14810 134 aa20.39■□□□□ 0.85
CXCL12-204ENST00000395793 CHMP2AO43633 222 aa20.39■□□□□ 0.85
CXCL12-204ENST00000395793 GPR32O75388 356 aa20.39■□□□□ 0.85
CXCL12-204ENST00000395793 RPS6KA5O75582 802 aa20.39■□□□□ 0.85
CXCL12-204ENST00000395793 RB1P06400 928 aa20.39■□□□□ 0.85
CXCL12-204ENST00000395793 NEFLP07196 543 aa20.39■□□□□ 0.85
CXCL12-204ENST00000395793 CLCN3P51790 818 aa20.39■□□□□ 0.85
CXCL12-204ENST00000395793 COL19A1Q14993 1142 aa20.39■□□□□ 0.85
CXCL12-204ENST00000395793 LEXMQ3ZCV2 418 aa20.39■□□□□ 0.85
CXCL12-204ENST00000395793 PAN2Q504Q3 1202 aaKnown RBP20.39■□□□□ 0.85
CXCL12-204ENST00000395793 FAM228AQ86W67 206 aa20.39■□□□□ 0.85
CXCL12-204ENST00000395793 CMTR2Q8IYT2 770 aaKnown RBP20.39■□□□□ 0.85
CXCL12-204ENST00000395793 BLIDQ8IZY5 108 aa20.39■□□□□ 0.85
CXCL12-204ENST00000395793 OSMRQ99650 979 aa20.39■□□□□ 0.85
CXCL12-204ENST00000395793 C11orf84Q9BUA3 381 aaPredicted RBP20.39■□□□□ 0.85
CXCL12-204ENST00000395793 NSUN3Q9H649 340 aaKnown RBP20.39■□□□□ 0.85
CXCL12-204ENST00000395793 DISC1Q9NRI5 854 aa20.39■□□□□ 0.85
CXCL12-204ENST00000395793 TCEAL9Q9UHQ7 104 aa20.39■□□□□ 0.85
CXCL12-204ENST00000395793 SAMM50Q9Y512 469 aa20.39■□□□□ 0.85
CXCL12-204ENST00000395793 GAS7O60861 476 aa20.38■□□□□ 0.85
CXCL12-204ENST00000395793 PSMD10O75832 226 aa20.38■□□□□ 0.85
CXCL12-204ENST00000395793 PRKCEQ02156 737 aa20.38■□□□□ 0.85
CXCL12-204ENST00000395793 SCRN1Q12765 414 aa20.38■□□□□ 0.85
CXCL12-204ENST00000395793 CAMK1Q14012 370 aa20.38■□□□□ 0.85
CXCL12-204ENST00000395793 LRCH2Q5VUJ6 765 aa20.38■□□□□ 0.85
CXCL12-204ENST00000395793 METTL13Q8N6R0 699 aa20.38■□□□□ 0.85
CXCL12-204ENST00000395793 KHSRPQ92945 711 aaKnown RBP eCLIP20.38■□□□□ 0.85
CXCL12-204ENST00000395793 MBOAT7Q96N66 472 aa20.38■□□□□ 0.85
CXCL12-204ENST00000395793 RIT2Q99578 217 aa20.38■□□□□ 0.85
CXCL12-204ENST00000395793 CD320Q9NPF0 282 aa20.38■□□□□ 0.85
CXCL12-204ENST00000395793 ST3GAL5Q9UNP4 418 aa20.38■□□□□ 0.85
CXCL12-204ENST00000395793 KCNJ14Q9UNX9 436 aa20.38■□□□□ 0.85
CXCL12-204ENST00000395793 RWDD3Q9Y3V2 267 aa20.38■□□□□ 0.85
CXCL12-204ENST00000395793 CYP3A7-CYP3A51PA0A087WV96 503 aa20.37■□□□□ 0.85
CXCL12-204ENST00000395793 CSPG5O95196 566 aa20.37■□□□□ 0.85
CXCL12-204ENST00000395793 OATP04181 439 aa20.37■□□□□ 0.85
CXCL12-204ENST00000395793 IL9P15248 144 aa20.37■□□□□ 0.85
CXCL12-204ENST00000395793 IBSPP21815 317 aaPredicted RBP20.37■□□□□ 0.85
CXCL12-204ENST00000395793 CYP3A7P24462 503 aa20.37■□□□□ 0.85
CXCL12-204ENST00000395793 SARSP49591 514 aaKnown RBP20.37■□□□□ 0.85
CXCL12-204ENST00000395793 CRYBB1P53674 252 aaPredicted RBP20.37■□□□□ 0.85
CXCL12-204ENST00000395793 Q4G0T1 1027 aa20.37■□□□□ 0.85
CXCL12-204ENST00000395793 B3GNT9Q6UX72 402 aa20.37■□□□□ 0.85
CXCL12-204ENST00000395793 LRRC71Q8N4P6 559 aa20.37■□□□□ 0.85
CXCL12-204ENST00000395793 NEK9Q8TD19 979 aa20.37■□□□□ 0.85
CXCL12-204ENST00000395793 ADAM2Q99965 735 aa20.37■□□□□ 0.85
CXCL12-204ENST00000395793 TEKT3Q9BXF9 490 aa20.37■□□□□ 0.85
CXCL12-204ENST00000395793 LMAN2LQ9H0V9 348 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms