RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 TISP43B9A030 160 aa19.65■□□□□ 0.74
SREBF1-204ENST00000395756 MRPS25P82663 173 aaKnown RBP19.65■□□□□ 0.74
SREBF1-204ENST00000395756 PTPROQ16827 1216 aa19.65■□□□□ 0.74
SREBF1-204ENST00000395756 GPR161Q8N6U8 529 aaKnown RBP19.65■□□□□ 0.74
SREBF1-204ENST00000395756 CAGE1Q8TC20 777 aa19.65■□□□□ 0.74
SREBF1-204ENST00000395756 TRPM4Q8TD43 1214 aa19.65■□□□□ 0.74
SREBF1-204ENST00000395756 CCDC43Q96MW1 224 aaKnown RBP19.65■□□□□ 0.74
SREBF1-204ENST00000395756 KIAA1683Q9H0B3 1180 aa19.65■□□□□ 0.74
SREBF1-204ENST00000395756 PCIF1Q9H4Z3 704 aa19.65■□□□□ 0.74
SREBF1-204ENST00000395756 SLC38A10Q9HBR0 1119 aa19.65■□□□□ 0.74
SREBF1-204ENST00000395756 SAR1BQ9Y6B6 198 aa19.65■□□□□ 0.74
SREBF1-204ENST00000395756 TGFB1I1O43294 461 aa19.64■□□□□ 0.73
SREBF1-204ENST00000395756 USO1O60763 962 aaKnown RBP19.64■□□□□ 0.73
SREBF1-204ENST00000395756 EDRF1Q3B7T1 1238 aa19.64■□□□□ 0.73
SREBF1-204ENST00000395756 TKFCQ3LXA3 575 aa19.64■□□□□ 0.73
SREBF1-204ENST00000395756 EPM2AIP1Q7L775 607 aaPredicted RBP19.64■□□□□ 0.73
SREBF1-204ENST00000395756 CNPY4Q8N129 248 aa19.64■□□□□ 0.73
SREBF1-204ENST00000395756 SPAG5Q96R06 1193 aa19.64■□□□□ 0.73
SREBF1-204ENST00000395756 PICK1Q9NRD5 415 aa19.64■□□□□ 0.73
SREBF1-204ENST00000395756 SALL4Q9UJQ4 1053 aa19.64■□□□□ 0.73
SREBF1-204ENST00000395756 HIP1RO75146 1068 aa19.64■□□□□ 0.73
SREBF1-204ENST00000395756 HSD17B4P51659 736 aa19.64■□□□□ 0.73
SREBF1-204ENST00000395756 ZNF280AP59817 542 aaPredicted RBP19.64■□□□□ 0.73
SREBF1-204ENST00000395756 MAP3K10Q02779 954 aa19.64■□□□□ 0.73
SREBF1-204ENST00000395756 BAATQ14032 418 aaPredicted RBP19.64■□□□□ 0.73
SREBF1-204ENST00000395756 EPHA7Q15375 998 aa19.64■□□□□ 0.73
SREBF1-204ENST00000395756 SLC9C1Q4G0N8 1177 aa19.64■□□□□ 0.73
SREBF1-204ENST00000395756 ARHGEF16Q5VV41 709 aa19.64■□□□□ 0.73
SREBF1-204ENST00000395756 RNF207Q6ZRF8 634 aa19.64■□□□□ 0.73
SREBF1-204ENST00000395756 MMS19Q96T76 1030 aa19.64■□□□□ 0.73
SREBF1-204ENST00000395756 TYW1Q9NV66 732 aaKnown RBP19.64■□□□□ 0.73
SREBF1-204ENST00000395756 MYO1AQ9UBC5 1043 aa19.64■□□□□ 0.73
SREBF1-204ENST00000395756 TRAF3IP3Q9Y228 551 aa19.64■□□□□ 0.73
SREBF1-204ENST00000395756 PDXKO00764 312 aa19.63■□□□□ 0.73
SREBF1-204ENST00000395756 PADI6Q6TGC4 694 aa19.63■□□□□ 0.73
SREBF1-204ENST00000395756 LPAR1Q92633 364 aa19.63■□□□□ 0.73
SREBF1-204ENST00000395756 PNKPQ96T60 521 aa19.63■□□□□ 0.73
SREBF1-204ENST00000395756 CEP72Q9P209 647 aa19.63■□□□□ 0.73
SREBF1-204ENST00000395756 PPP1R9AQ9ULJ8 1098 aa19.63■□□□□ 0.73
SREBF1-204ENST00000395756 NCK2O43639 380 aa19.63■□□□□ 0.73
SREBF1-204ENST00000395756 ZBED4O75132 1171 aa19.63■□□□□ 0.73
SREBF1-204ENST00000395756 AFPP02771 609 aaKnown RBP19.63■□□□□ 0.73
SREBF1-204ENST00000395756 EPB41P11171 864 aaKnown RBP19.63■□□□□ 0.73
SREBF1-204ENST00000395756 MATR3P43243 847 aaKnown RBP eCLIP19.63■□□□□ 0.73
SREBF1-204ENST00000395756 EXOC3L4Q17RC7 722 aa19.63■□□□□ 0.73
SREBF1-204ENST00000395756 HGSNATQ68CP4 663 aa19.63■□□□□ 0.73
SREBF1-204ENST00000395756 RABGGTAQ92696 567 aa19.63■□□□□ 0.73
SREBF1-204ENST00000395756 GPRC5CQ9NQ84 441 aa19.63■□□□□ 0.73
SREBF1-204ENST00000395756 SMARCAL1Q9NZC9 954 aa19.63■□□□□ 0.73
SREBF1-204ENST00000395756 ZMYND10O75800 440 aa19.62■□□□□ 0.73
SREBF1-204ENST00000395756 SETQ01105 290 aaPredicted RBP19.62■□□□□ 0.73
SREBF1-204ENST00000395756 KLHL30Q0D2K2 578 aa19.62■□□□□ 0.73
SREBF1-204ENST00000395756 MCF2L2Q86YR7 1114 aa19.62■□□□□ 0.73
SREBF1-204ENST00000395756 SUGCTQ9HAC7 445 aa19.62■□□□□ 0.73
SREBF1-204ENST00000395756 FHOD1Q9Y613 1164 aa19.62■□□□□ 0.73
SREBF1-204ENST00000395756 STK24Q9Y6E0 443 aa19.62■□□□□ 0.73
SREBF1-204ENST00000395756 PLA2G6O60733 806 aa19.62■□□□□ 0.73
SREBF1-204ENST00000395756 TRIM49P0CI25 452 aa19.62■□□□□ 0.73
SREBF1-204ENST00000395756 TRIM49CP0CI26 452 aa19.62■□□□□ 0.73
SREBF1-204ENST00000395756 RPL13P26373 211 aaKnown RBP19.62■□□□□ 0.73
SREBF1-204ENST00000395756 NPEPPSP55786 919 aa19.62■□□□□ 0.73
SREBF1-204ENST00000395756 AMPD2Q01433 879 aa19.62■□□□□ 0.73
SREBF1-204ENST00000395756 PPP4R3CPQ6ZMV5 832 aa19.62■□□□□ 0.73
SREBF1-204ENST00000395756 PLA2G4FQ68DD2 849 aa19.62■□□□□ 0.73
SREBF1-204ENST00000395756 ZNF720Q7Z2F6 126 aa19.62■□□□□ 0.73
SREBF1-204ENST00000395756 ANKZF1Q9H8Y5 726 aa19.62■□□□□ 0.73
SREBF1-204ENST00000395756 CCDC66A2RUB6 948 aa19.61■□□□□ 0.73
SREBF1-204ENST00000395756 VWA5AO00534 786 aa19.61■□□□□ 0.73
SREBF1-204ENST00000395756 SNRNP48Q6IEG0 339 aaKnown RBP19.61■□□□□ 0.73
SREBF1-204ENST00000395756 ARHGAP27Q6ZUM4 889 aa19.61■□□□□ 0.73
SREBF1-204ENST00000395756 PACSIN1Q9BY11 444 aa19.61■□□□□ 0.73
SREBF1-204ENST00000395756 RNF146Q9NTX7 359 aa19.61■□□□□ 0.73
SREBF1-204ENST00000395756 GGA3Q9NZ52 723 aa19.61■□□□□ 0.73
SREBF1-204ENST00000395756 K7ENM7 598 aa19.61■□□□□ 0.73
SREBF1-204ENST00000395756 HNRNPH3P31942 346 aaKnown RBP19.61■□□□□ 0.73
SREBF1-204ENST00000395756 BACE1P56817 501 aa19.61■□□□□ 0.73
SREBF1-204ENST00000395756 UGCGQ16739 394 aa19.61■□□□□ 0.73
SREBF1-204ENST00000395756 FAM186BQ8IYM0 893 aa19.61■□□□□ 0.73
SREBF1-204ENST00000395756 AGO4Q9HCK5 861 aaKnown RBP19.61■□□□□ 0.73
SREBF1-204ENST00000395756 EHD2Q9NZN4 543 aa19.61■□□□□ 0.73
SREBF1-204ENST00000395756 FAM184BQ9ULE4 1060 aa19.61■□□□□ 0.73
SREBF1-204ENST00000395756 TELO2Q9Y4R8 837 aa19.61■□□□□ 0.73
SREBF1-204ENST00000395756 A0A087X0T9 212 aa19.6■□□□□ 0.73
SREBF1-204ENST00000395756 DHX15O43143 795 aaKnown RBP19.6■□□□□ 0.73
SREBF1-204ENST00000395756 FAM228BP0C875 321 aa19.6■□□□□ 0.73
SREBF1-204ENST00000395756 PGM5Q15124 567 aa19.6■□□□□ 0.73
SREBF1-204ENST00000395756 TRAPPC11Q7Z392 1133 aa19.6■□□□□ 0.73
SREBF1-204ENST00000395756 GCNT4Q9P109 453 aa19.6■□□□□ 0.73
SREBF1-204ENST00000395756 UCHL3P15374 230 aa19.6■□□□□ 0.73
SREBF1-204ENST00000395756 PON1P27169 355 aa19.6■□□□□ 0.73
SREBF1-204ENST00000395756 CDK17Q00537 523 aa19.6■□□□□ 0.73
SREBF1-204ENST00000395756 BMS1Q14692 1282 aaKnown RBP19.6■□□□□ 0.73
SREBF1-204ENST00000395756 CC2D1AQ6P1N0 951 aaPredicted RBP19.6■□□□□ 0.73
SREBF1-204ENST00000395756 HS2ST1Q7LGA3 356 aa19.6■□□□□ 0.73
SREBF1-204ENST00000395756 FRMD5Q7Z6J6 570 aa19.6■□□□□ 0.73
SREBF1-204ENST00000395756 ZNF280CQ8ND82 737 aa19.6■□□□□ 0.73
SREBF1-204ENST00000395756 AJAP1Q9UKB5 411 aaPredicted RBP19.6■□□□□ 0.73
SREBF1-204ENST00000395756 GAP43P17677 238 aa19.6■□□□□ 0.73
SREBF1-204ENST00000395756 PTPRAP18433 802 aa19.6■□□□□ 0.73
SREBF1-204ENST00000395756 RPS12P25398 132 aaKnown RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms