RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 NME1P15531 152 aaKnown RBP7.04□□□□□ -1.28
AP3S1-202ENST00000395548 CTGFP29279 349 aa7.04□□□□□ -1.28
AP3S1-202ENST00000395548 TRHRP34981 398 aaPredicted RBP7.04□□□□□ -1.28
AP3S1-202ENST00000395548 TEFQ10587 303 aa7.04□□□□□ -1.28
AP3S1-202ENST00000395548 SNX17Q15036 470 aa7.04□□□□□ -1.28
AP3S1-202ENST00000395548 EAF1Q96JC9 268 aaPredicted RBP7.04□□□□□ -1.28
AP3S1-202ENST00000395548 TOX2Q96NM4 488 aa7.04□□□□□ -1.28
AP3S1-202ENST00000395548 BACH2Q9BYV9 841 aa7.04□□□□□ -1.28
AP3S1-202ENST00000395548 RNF32Q9H0A6 362 aa7.04□□□□□ -1.28
AP3S1-202ENST00000395548 SLC6A17Q9H1V8 727 aa7.04□□□□□ -1.28
AP3S1-202ENST00000395548 UBR2Q8IWV8 1755 aa7.04□□□□□ -1.28
AP3S1-202ENST00000395548 DDX60Q8IY21 1712 aaKnown RBP7.04□□□□□ -1.28
AP3S1-202ENST00000395548 KMT2BQ9UMN6 2715 aaPredicted RBP7.03□□□□□ -1.28
AP3S1-202ENST00000395548 TMEM253P0C7T8 217 aa7.03□□□□□ -1.28
AP3S1-202ENST00000395548 U2AF1L5P0DN76 240 aaPredicted RBP7.03□□□□□ -1.28
AP3S1-202ENST00000395548 IMPDH2P12268 514 aa7.03□□□□□ -1.28
AP3S1-202ENST00000395548 POLR2BP30876 1174 aaKnown RBP7.03□□□□□ -1.28
AP3S1-202ENST00000395548 PCBP3P57721 371 aaKnown RBP7.03□□□□□ -1.28
AP3S1-202ENST00000395548 U2AF1Q01081 240 aaKnown RBP eCLIP7.03□□□□□ -1.282e-6■■■■□ 19.7
AP3S1-202ENST00000395548 SLC10A5Q5PT55 438 aa7.03□□□□□ -1.28
AP3S1-202ENST00000395548 C9orf50Q5SZB4 431 aa7.03□□□□□ -1.28
AP3S1-202ENST00000395548 TCTN2Q96GX1 697 aa7.03□□□□□ -1.28
AP3S1-202ENST00000395548 PRRX2Q99811 253 aa7.03□□□□□ -1.28
AP3S1-202ENST00000395548 SP110Q9HB58 689 aa7.03□□□□□ -1.28
AP3S1-202ENST00000395548 POLLQ9UGP5 575 aa7.03□□□□□ -1.28
AP3S1-202ENST00000395548 CPA4Q9UI42 421 aa7.03□□□□□ -1.28
AP3S1-202ENST00000395548 OGDHLQ9ULD0 1010 aa7.03□□□□□ -1.28
AP3S1-202ENST00000395548 ZNF281Q9Y2X9 895 aa7.03□□□□□ -1.28
AP3S1-202ENST00000395548 PFASO15067 1338 aa7.02□□□□□ -1.28
AP3S1-202ENST00000395548 MYO3BQ8WXR4 1341 aa7.02□□□□□ -1.28
AP3S1-202ENST00000395548 TCF20Q9UGU0 1960 aaKnown RBP7.02□□□□□ -1.29
AP3S1-202ENST00000395548 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.02□□□□□ -1.29
AP3S1-202ENST00000395548 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.02□□□□□ -1.29
AP3S1-202ENST00000395548 BTBD19C9JJ37 291 aa7.02□□□□□ -1.29
AP3S1-202ENST00000395548 TNFRSF10CO14798 259 aa7.02□□□□□ -1.29
AP3S1-202ENST00000395548 ERC2O15083 957 aa7.02□□□□□ -1.29
AP3S1-202ENST00000395548 USP2O75604 605 aaPredicted RBP7.02□□□□□ -1.29
AP3S1-202ENST00000395548 NTSR2O95665 410 aa7.02□□□□□ -1.29
AP3S1-202ENST00000395548 VAMP1P23763 118 aa7.02□□□□□ -1.29
AP3S1-202ENST00000395548 RPL10P27635 214 aaKnown RBP7.02□□□□□ -1.29
AP3S1-202ENST00000395548 ID4P47928 161 aa7.02□□□□□ -1.29
AP3S1-202ENST00000395548 PIP4K2AP48426 406 aaPredicted RBP7.02□□□□□ -1.29
AP3S1-202ENST00000395548 FLT3LGP49771 235 aa7.02□□□□□ -1.29
AP3S1-202ENST00000395548 KCNQ1P51787 676 aa7.02□□□□□ -1.29
AP3S1-202ENST00000395548 LRRC26Q2I0M4 334 aa7.02□□□□□ -1.29
AP3S1-202ENST00000395548 KRTAP19-4Q3LI73 84 aa7.02□□□□□ -1.29
AP3S1-202ENST00000395548 PARP10Q53GL7 1025 aa7.02□□□□□ -1.29
AP3S1-202ENST00000395548 SUSD4Q5VX71 490 aa7.02□□□□□ -1.29
AP3S1-202ENST00000395548 SULT6B1Q6IMI4 303 aa7.02□□□□□ -1.29
AP3S1-202ENST00000395548 IRF2BP1Q8IU81 584 aa7.02□□□□□ -1.29
AP3S1-202ENST00000395548 LINC01599Q8WXQ3 324 aa7.02□□□□□ -1.29
AP3S1-202ENST00000395548 TIFAQ96CG3 184 aa7.02□□□□□ -1.29
AP3S1-202ENST00000395548 ZMYM5Q9UJ78 669 aa7.02□□□□□ -1.29
AP3S1-202ENST00000395548 GABRQQ9UN88 632 aa7.02□□□□□ -1.29
AP3S1-202ENST00000395548 ZFHX4Q86UP3 3567 aa7.02□□□□□ -1.29
AP3S1-202ENST00000395548 CFAP47Q6ZTR5 3102 aa7.02□□□□□ -1.29
AP3S1-202ENST00000395548 ZSWIM8A7E2V4 1837 aa7.01□□□□□ -1.29
AP3S1-202ENST00000395548 DUOX1Q9NRD9 1551 aa7.01□□□□□ -1.29
AP3S1-202ENST00000395548 ANKRD62A6NC57 917 aa7.01□□□□□ -1.29
AP3S1-202ENST00000395548 SASH1O94885 1247 aa7.01□□□□□ -1.29
AP3S1-202ENST00000395548 COL6A1P12109 1028 aa7.01□□□□□ -1.29
AP3S1-202ENST00000395548 GPTP24298 496 aa7.01□□□□□ -1.29
AP3S1-202ENST00000395548 FANCCQ00597 558 aa7.01□□□□□ -1.29
AP3S1-202ENST00000395548 TFF2Q03403 129 aa7.01□□□□□ -1.29
AP3S1-202ENST00000395548 SNAPC2Q13487 334 aa7.01□□□□□ -1.29
AP3S1-202ENST00000395548 NAALADL2Q58DX5 795 aa7.01□□□□□ -1.29
AP3S1-202ENST00000395548 TMC3Q7Z5M5 1100 aa7.01□□□□□ -1.29
AP3S1-202ENST00000395548 DHX37Q8IY37 1157 aaKnown RBP7.01□□□□□ -1.29
AP3S1-202ENST00000395548 ZSCAN18Q8TBC5 510 aaPredicted RBP7.01□□□□□ -1.29
AP3S1-202ENST00000395548 HERVK_113Q902F9 699 aa7.01□□□□□ -1.29
AP3S1-202ENST00000395548 RNF34Q969K3 372 aa7.01□□□□□ -1.29
AP3S1-202ENST00000395548 DHRS1Q96LJ7 313 aa7.01□□□□□ -1.29
AP3S1-202ENST00000395548 RNPC3Q96LT9 517 aaKnown RBP7.01□□□□□ -1.29
AP3S1-202ENST00000395548 MKRN2Q9H000 416 aaKnown RBP7.01□□□□□ -1.29
AP3S1-202ENST00000395548 ANTXR1Q9H6X2 564 aa7.01□□□□□ -1.29
AP3S1-202ENST00000395548 GPR160Q9UJ42 338 aa7.01□□□□□ -1.29
AP3S1-202ENST00000395548 TCFL5Q9UL49 500 aa7.01□□□□□ -1.29
AP3S1-202ENST00000395548 COG5Q9UP83 839 aa7.01□□□□□ -1.29
AP3S1-202ENST00000395548 YBX2Q9Y2T7 364 aaKnown RBP7.01□□□□□ -1.29
AP3S1-202ENST00000395548 USP16Q9Y5T5 823 aa7.01□□□□□ -1.29
AP3S1-202ENST00000395548 COL3A1P02461 1466 aaPredicted RBP7□□□□□ -1.29
AP3S1-202ENST00000395548 SIGLEC6O43699 453 aa7□□□□□ -1.29
AP3S1-202ENST00000395548 PRAMEF1O95521 474 aa7□□□□□ -1.29
AP3S1-202ENST00000395548 HMGCRP04035 888 aa7□□□□□ -1.29
AP3S1-202ENST00000395548 SNRPA1P09661 255 aaKnown RBP7□□□□□ -1.29
AP3S1-202ENST00000395548 C1QTNF9P0C862 333 aa7□□□□□ -1.29
AP3S1-202ENST00000395548 KIF6Q6ZMV9 814 aa7□□□□□ -1.29
AP3S1-202ENST00000395548 TBC1D16Q8TBP0 767 aa7□□□□□ -1.29
AP3S1-202ENST00000395548 KCNN1Q92952 543 aa7□□□□□ -1.29
AP3S1-202ENST00000395548 SLC6A18Q96N87 628 aa7□□□□□ -1.29
AP3S1-202ENST00000395548 UTP14AQ9BVJ6 771 aaKnown RBP7□□□□□ -1.29
AP3S1-202ENST00000395548 FOXP3Q9BZS1 431 aa7□□□□□ -1.29
AP3S1-202ENST00000395548 PRDM14Q9GZV8 571 aa7□□□□□ -1.29
AP3S1-202ENST00000395548 PRDM12Q9H4Q4 367 aa7□□□□□ -1.29
AP3S1-202ENST00000395548 PCDHB12Q9Y5F1 795 aa7□□□□□ -1.29
AP3S1-202ENST00000395548 MAP3K15Q6ZN16 1313 aa7□□□□□ -1.29
AP3S1-202ENST00000395548 KIF20BQ96Q89 1820 aa6.99□□□□□ -1.29
AP3S1-202ENST00000395548 DCHS1Q96JQ0 3298 aa6.99□□□□□ -1.29
AP3S1-202ENST00000395548 TNPO2O14787 897 aaKnown RBP6.99□□□□□ -1.29
AP3S1-202ENST00000395548 MYO1BO43795 1136 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms