RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 MGAT3Q09327 533 aa15.41■□□□□ 0.06
SCAF11-203ENST00000395453 CTC1Q2NKJ3 1217 aa15.41■□□□□ 0.06
SCAF11-203ENST00000395453 JAKMIP3Q5VZ66 844 aa15.41■□□□□ 0.06
SCAF11-203ENST00000395453 RNF135Q8IUD6 432 aa15.41■□□□□ 0.06
SCAF11-203ENST00000395453 EDAQ92838 391 aa15.41■□□□□ 0.06
SCAF11-203ENST00000395453 APBB2Q92870 758 aa15.41■□□□□ 0.06
SCAF11-203ENST00000395453 ZSWIM6Q9HCJ5 1215 aa15.41■□□□□ 0.06
SCAF11-203ENST00000395453 TUBE1Q9UJT0 475 aa15.41■□□□□ 0.06
SCAF11-203ENST00000395453 DHX15O43143 795 aaKnown RBP15.4■□□□□ 0.06
SCAF11-203ENST00000395453 MBTPS2O43462 519 aa15.4■□□□□ 0.06
SCAF11-203ENST00000395453 IFNAR1P17181 557 aa15.4■□□□□ 0.06
SCAF11-203ENST00000395453 RUFY3Q7L099 469 aa15.4■□□□□ 0.06
SCAF11-203ENST00000395453 RSPH3Q86UC2 560 aa15.4■□□□□ 0.06
SCAF11-203ENST00000395453 PRSS33Q8NF86 280 aa15.4■□□□□ 0.06
SCAF11-203ENST00000395453 CCDC12Q8WUD4 166 aaPredicted RBP15.4■□□□□ 0.06
SCAF11-203ENST00000395453 PHKBQ93100 1093 aa15.4■□□□□ 0.06
SCAF11-203ENST00000395453 RNF26Q9BY78 433 aaPredicted RBP15.4■□□□□ 0.06
SCAF11-203ENST00000395453 IFIH1Q9BYX4 1025 aaKnown RBP15.4■□□□□ 0.06
SCAF11-203ENST00000395453 LMAN2LQ9H0V9 348 aa15.4■□□□□ 0.06
SCAF11-203ENST00000395453 AZI2Q9H6S1 392 aa15.4■□□□□ 0.06
SCAF11-203ENST00000395453 C6orf50Q9HD87 102 aa15.4■□□□□ 0.06
SCAF11-203ENST00000395453 COL4A6Q14031 1691 aa15.39■□□□□ 0.05
SCAF11-203ENST00000395453 CCNE2O96020 404 aa15.39■□□□□ 0.05
SCAF11-203ENST00000395453 RPLP2P05387 115 aaKnown RBP15.39■□□□□ 0.05
SCAF11-203ENST00000395453 RB1P06400 928 aa15.39■□□□□ 0.05
SCAF11-203ENST00000395453 GNA11P29992 359 aa15.39■□□□□ 0.05
SCAF11-203ENST00000395453 ZNF76P36508 570 aa15.39■□□□□ 0.05
SCAF11-203ENST00000395453 SLC26A2P50443 739 aa15.39■□□□□ 0.05
SCAF11-203ENST00000395453 STAT5BP51692 787 aa15.39■□□□□ 0.05
SCAF11-203ENST00000395453 SMAD4Q13485 552 aaKnown RBP15.39■□□□□ 0.05
SCAF11-203ENST00000395453 TOB2Q14106 344 aaPredicted RBP15.39■□□□□ 0.05
SCAF11-203ENST00000395453 PLCB4Q15147 1175 aa15.39■□□□□ 0.05
SCAF11-203ENST00000395453 CLUL1Q15846 466 aa15.39■□□□□ 0.05
SCAF11-203ENST00000395453 ABHD15Q6UXT9 468 aa15.39■□□□□ 0.05
SCAF11-203ENST00000395453 PLA2G4DQ86XP0 818 aa15.39■□□□□ 0.05
SCAF11-203ENST00000395453 DNAJB3Q8WWF6 145 aa15.39■□□□□ 0.05
SCAF11-203ENST00000395453 TNPO1Q92973 898 aaKnown RBP15.39■□□□□ 0.05
SCAF11-203ENST00000395453 TM6SF1Q9BZW5 370 aa15.39■□□□□ 0.05
SCAF11-203ENST00000395453 ZDBF2Q9HCK1 2354 aa15.38■□□□□ 0.05
SCAF11-203ENST00000395453 C5orf67F2Z3F1 127 aa15.38■□□□□ 0.05
SCAF11-203ENST00000395453 IPO5O00410 1097 aaKnown RBP15.38■□□□□ 0.05
SCAF11-203ENST00000395453 CTNNB1P35222 781 aa15.38■□□□□ 0.05
SCAF11-203ENST00000395453 DLX2Q07687 328 aaPredicted RBP15.38■□□□□ 0.05
SCAF11-203ENST00000395453 HYAL1Q12794 435 aa15.38■□□□□ 0.05
SCAF11-203ENST00000395453 LPIN1Q14693 890 aa15.38■□□□□ 0.05
SCAF11-203ENST00000395453 FBXO47Q5MNV8 452 aa15.38■□□□□ 0.05
SCAF11-203ENST00000395453 LCE2DQ5TA82 110 aaPredicted RBP15.38■□□□□ 0.05
SCAF11-203ENST00000395453 SUGP1Q8IWZ8 645 aaKnown RBP15.38■□□□□ 0.05
SCAF11-203ENST00000395453 REXO1Q8N1G1 1221 aaKnown RBP15.38■□□□□ 0.05
SCAF11-203ENST00000395453 FIBCD1Q8N539 461 aa15.38■□□□□ 0.05
SCAF11-203ENST00000395453 PBXIP1Q96AQ6 731 aa15.38■□□□□ 0.05
SCAF11-203ENST00000395453 C11orf84Q9BUA3 381 aaPredicted RBP15.38■□□□□ 0.05
SCAF11-203ENST00000395453 RWDD3Q9Y3V2 267 aa15.38■□□□□ 0.05
SCAF11-203ENST00000395453 PCDHA2Q9Y5H9 948 aa15.38■□□□□ 0.05
SCAF11-203ENST00000395453 SQORQ9Y6N5 450 aa15.38■□□□□ 0.05
SCAF11-203ENST00000395453 TMEM221A6NGB7 291 aa15.37■□□□□ 0.05
SCAF11-203ENST00000395453 M0R296 226 aa15.37■□□□□ 0.05
SCAF11-203ENST00000395453 EDIL3O43854 480 aa15.37■□□□□ 0.05
SCAF11-203ENST00000395453 GHRP10912 638 aa15.37■□□□□ 0.05
SCAF11-203ENST00000395453 CIITAP33076 1130 aa15.37■□□□□ 0.05
SCAF11-203ENST00000395453 IGBP1P78318 339 aa15.37■□□□□ 0.05
SCAF11-203ENST00000395453 AKAP17AQ02040 695 aaKnown RBP15.37■□□□□ 0.05
SCAF11-203ENST00000395453 TRIM67Q6ZTA4 783 aa15.37■□□□□ 0.05
SCAF11-203ENST00000395453 BICD2Q8TD16 824 aa15.37■□□□□ 0.05
SCAF11-203ENST00000395453 ZBTB10Q96DT7 871 aa15.37■□□□□ 0.05
SCAF11-203ENST00000395453 IL17RAQ96F46 866 aa15.37■□□□□ 0.05
SCAF11-203ENST00000395453 ZNF274Q96GC6 653 aaPredicted RBP15.37■□□□□ 0.05
SCAF11-203ENST00000395453 NCOA5Q9HCD5 579 aaKnown RBP15.37■□□□□ 0.05
SCAF11-203ENST00000395453 SH3GLB2Q9NR46 395 aa15.37■□□□□ 0.05
SCAF11-203ENST00000395453 CD207Q9UJ71 328 aa15.37■□□□□ 0.05
SCAF11-203ENST00000395453 CYP46A1Q9Y6A2 500 aa15.37■□□□□ 0.05
SCAF11-203ENST00000395453 CDY2AQ9Y6F7 541 aa15.37■□□□□ 0.05
SCAF11-203ENST00000395453 NLRC5Q86WI3 1866 aa15.36■□□□□ 0.05
SCAF11-203ENST00000395453 CACNA1HO95180 2353 aa15.36■□□□□ 0.05
SCAF11-203ENST00000395453 ENPP3O14638 875 aa15.36■□□□□ 0.05
SCAF11-203ENST00000395453 BMPR1AP36894 532 aa15.36■□□□□ 0.05
SCAF11-203ENST00000395453 CCT2P78371 535 aaKnown RBP15.36■□□□□ 0.05
SCAF11-203ENST00000395453 MRPS6P82932 125 aaKnown RBP15.36■□□□□ 0.05
SCAF11-203ENST00000395453 IER5Q5VY09 327 aa15.36■□□□□ 0.05
SCAF11-203ENST00000395453 TRAPPC12Q8WVT3 735 aa15.36■□□□□ 0.05
SCAF11-203ENST00000395453 LENG9Q96B70 501 aa15.36■□□□□ 0.05
SCAF11-203ENST00000395453 FAM212AQ96EL1 285 aa15.36■□□□□ 0.05
SCAF11-203ENST00000395453 SLC26A6Q9BXS9 759 aa15.36■□□□□ 0.05
SCAF11-203ENST00000395453 TBC1D22BQ9NU19 505 aa15.36■□□□□ 0.05
SCAF11-203ENST00000395453 RALGAPA2Q2PPJ7 1873 aa15.36■□□□□ 0.05
SCAF11-203ENST00000395453 ZFHX2Q9C0A1 2572 aaPredicted RBP15.36■□□□□ 0.05
SCAF11-203ENST00000395453 SMIM35A0A1B0GVV1 85 aa15.35■□□□□ 0.05
SCAF11-203ENST00000395453 DDX39AO00148 427 aaKnown RBP15.35■□□□□ 0.05
SCAF11-203ENST00000395453 GRM6O15303 877 aa15.35■□□□□ 0.05
SCAF11-203ENST00000395453 HBP1O60381 514 aa15.35■□□□□ 0.05
SCAF11-203ENST00000395453 PPFIA3O75145 1194 aa15.35■□□□□ 0.05
SCAF11-203ENST00000395453 TBX10O75333 385 aa15.35■□□□□ 0.05
SCAF11-203ENST00000395453 ATP4AP20648 1035 aa15.35■□□□□ 0.05
SCAF11-203ENST00000395453 SETQ01105 290 aaPredicted RBP15.35■□□□□ 0.05
SCAF11-203ENST00000395453 FOXK2Q01167 660 aa15.35■□□□□ 0.05
SCAF11-203ENST00000395453 ZNF746Q6NUN9 644 aaPredicted RBP15.35■□□□□ 0.05
SCAF11-203ENST00000395453 MTHFD1LQ6UB35 978 aa15.35■□□□□ 0.05
SCAF11-203ENST00000395453 TSHZ1Q6ZSZ6 1077 aa15.35■□□□□ 0.05
SCAF11-203ENST00000395453 CCDC60Q8IWA6 550 aaPredicted RBP15.35■□□□□ 0.05
SCAF11-203ENST00000395453 NME8Q8N427 588 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms