RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 IGSF22Q8N9C0 903 aa22.31■■□□□ 1.16
SNCA-203ENST00000394986 NEK9Q8TD19 979 aa22.31■■□□□ 1.16
SNCA-203ENST00000394986 CEP89Q96ST8 783 aa22.31■■□□□ 1.16
SNCA-203ENST00000394986 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.31■■□□□ 1.16
SNCA-203ENST00000394986 NIFKQ9BYG3 293 aaKnown RBP22.31■■□□□ 1.16
SNCA-203ENST00000394986 OSBPL7Q9BZF2 842 aa22.31■■□□□ 1.16
SNCA-203ENST00000394986 IL23AQ9NPF7 189 aa22.31■■□□□ 1.16
SNCA-203ENST00000394986 CEP131Q9UPN4 1083 aa22.31■■□□□ 1.16
SNCA-203ENST00000394986 VWA3AA6NCI4 1184 aa22.3■■□□□ 1.16
SNCA-203ENST00000394986 RSPH10B2B2RC85 870 aa22.3■■□□□ 1.16
SNCA-203ENST00000394986 DKC1O60832 514 aaKnown RBP eCLIP22.3■■□□□ 1.16
SNCA-203ENST00000394986 NBNO60934 754 aa22.3■■□□□ 1.16
SNCA-203ENST00000394986 F13A1P00488 732 aa22.3■■□□□ 1.16
SNCA-203ENST00000394986 RSPH10BP0C881 870 aa22.3■■□□□ 1.16
SNCA-203ENST00000394986 CDC25AP30304 524 aa22.3■■□□□ 1.16
SNCA-203ENST00000394986 YWHABP31946 246 aaKnown RBP22.3■■□□□ 1.16
SNCA-203ENST00000394986 CLCN3P51790 818 aa22.3■■□□□ 1.16
SNCA-203ENST00000394986 FOXD4L6Q3SYB3 417 aaPredicted RBP22.3■■□□□ 1.16
SNCA-203ENST00000394986 FOXD4L3Q6VB84 417 aaPredicted RBP22.3■■□□□ 1.16
SNCA-203ENST00000394986 CATSPER3Q86XQ3 398 aa22.3■■□□□ 1.16
SNCA-203ENST00000394986 LRRC71Q8N4P6 559 aa22.3■■□□□ 1.16
SNCA-203ENST00000394986 METTL13Q8N6R0 699 aa22.3■■□□□ 1.16
SNCA-203ENST00000394986 USP28Q96RU2 1077 aa22.3■■□□□ 1.16
SNCA-203ENST00000394986 TANC1Q9C0D5 1861 aa22.29■■□□□ 1.16
SNCA-203ENST00000394986 SMIM35A0A1B0GVV1 85 aa22.29■■□□□ 1.16
SNCA-203ENST00000394986 SHHQ15465 462 aa22.29■■□□□ 1.16
SNCA-203ENST00000394986 POTEGQ6S5H5 508 aa22.29■■□□□ 1.16
SNCA-203ENST00000394986 ZNF365Q70YC5 407 aa22.29■■□□□ 1.16
SNCA-203ENST00000394986 ERMNQ8TAM6 284 aa22.29■■□□□ 1.16
SNCA-203ENST00000394986 PPP1R16BQ96T49 567 aa22.29■■□□□ 1.16
SNCA-203ENST00000394986 BMP2KQ9NSY1 1161 aaPredicted RBP22.29■■□□□ 1.16
SNCA-203ENST00000394986 CAND2O75155 1236 aa22.28■■□□□ 1.16
SNCA-203ENST00000394986 CHRNA1P02708 482 aa22.28■■□□□ 1.16
SNCA-203ENST00000394986 GRIN1Q05586 938 aa22.28■■□□□ 1.16
SNCA-203ENST00000394986 MGAT3Q09327 533 aa22.28■■□□□ 1.16
SNCA-203ENST00000394986 TBC1D8BQ0IIM8 1120 aa22.28■■□□□ 1.16
SNCA-203ENST00000394986 PTPAQ15257 358 aa22.28■■□□□ 1.16
SNCA-203ENST00000394986 ECM1Q16610 540 aa22.28■■□□□ 1.16
SNCA-203ENST00000394986 TMEM240Q5SV17 173 aa22.28■■□□□ 1.16
SNCA-203ENST00000394986 RPAINQ86UA6 219 aa22.28■■□□□ 1.16
SNCA-203ENST00000394986 RSPH3Q86UC2 560 aa22.28■■□□□ 1.16
SNCA-203ENST00000394986 KIAA0319LQ8IZA0 1049 aa22.28■■□□□ 1.16
SNCA-203ENST00000394986 SNX29Q8TEQ0 813 aa22.28■■□□□ 1.16
SNCA-203ENST00000394986 PIGOQ8TEQ8 1089 aa22.28■■□□□ 1.16
SNCA-203ENST00000394986 SUGCTQ9HAC7 445 aa22.28■■□□□ 1.16
SNCA-203ENST00000394986 CYP26B1Q9NR63 512 aa22.28■■□□□ 1.16
SNCA-203ENST00000394986 MYH9P35579 1960 aaKnown RBP22.28■■□□□ 1.16
SNCA-203ENST00000394986 WDR81Q562E7 1941 aa22.27■■□□□ 1.16
SNCA-203ENST00000394986 LYPLA2O95372 231 aa22.27■■□□□ 1.16
SNCA-203ENST00000394986 RFC2P35250 354 aa22.27■■□□□ 1.16
SNCA-203ENST00000394986 CCT6AP40227 531 aaKnown RBP22.27■■□□□ 1.16
SNCA-203ENST00000394986 MRPS6P82932 125 aaKnown RBP22.27■■□□□ 1.16
SNCA-203ENST00000394986 PDIA5Q14554 519 aa22.27■■□□□ 1.16
SNCA-203ENST00000394986 TCTN1Q2MV58 587 aa22.27■■□□□ 1.16
SNCA-203ENST00000394986 ARL6IP4Q66PJ3 421 aaKnown RBP22.27■■□□□ 1.16
SNCA-203ENST00000394986 EFCAB12Q6NXP0 572 aa22.27■■□□□ 1.16
SNCA-203ENST00000394986 TDHQ8IZJ6 230 aa22.27■■□□□ 1.16
SNCA-203ENST00000394986 LINC01465Q8N7H1 131 aa22.27■■□□□ 1.16
SNCA-203ENST00000394986 CEP170P1Q96L14 293 aa22.27■■□□□ 1.16
SNCA-203ENST00000394986 POLR3CQ9BUI4 534 aaPredicted RBP22.27■■□□□ 1.16
SNCA-203ENST00000394986 RAB34Q9BZG1 259 aa22.27■■□□□ 1.16
SNCA-203ENST00000394986 TUFT1Q9NNX1 390 aa22.27■■□□□ 1.16
SNCA-203ENST00000394986 DAXXQ9UER7 740 aaPredicted RBP22.27■■□□□ 1.16
SNCA-203ENST00000394986 CDY2AQ9Y6F7 541 aa22.27■■□□□ 1.16
SNCA-203ENST00000394986 SCN5AQ14524 2016 aa22.26■■□□□ 1.15
SNCA-203ENST00000394986 MAGEB2O15479 319 aa22.26■■□□□ 1.15
SNCA-203ENST00000394986 BMP15O95972 392 aa22.26■■□□□ 1.15
SNCA-203ENST00000394986 VTNP04004 478 aa22.26■■□□□ 1.15
SNCA-203ENST00000394986 RPA1P27694 616 aa22.26■■□□□ 1.15
SNCA-203ENST00000394986 MARCKSP29966 332 aaPredicted RBP22.26■■□□□ 1.15
SNCA-203ENST00000394986 DRP2Q13474 957 aa22.26■■□□□ 1.15
SNCA-203ENST00000394986 XKR9Q5GH70 373 aa22.26■■□□□ 1.15
SNCA-203ENST00000394986 FAM26DQ5JW98 314 aa22.26■■□□□ 1.15
SNCA-203ENST00000394986 HAUS3Q68CZ6 603 aa22.26■■□□□ 1.15
SNCA-203ENST00000394986 PSRC1Q6PGN9 363 aaPredicted RBP22.26■■□□□ 1.15
SNCA-203ENST00000394986 MMTAG2Q9BU76 263 aaKnown RBP22.26■■□□□ 1.15
SNCA-203ENST00000394986 TFIP11Q9UBB9 837 aaKnown RBP22.26■■□□□ 1.15
SNCA-203ENST00000394986 ZDHHC9Q9Y397 364 aa22.26■■□□□ 1.15
SNCA-203ENST00000394986 PDIA4P13667 645 aaKnown RBP22.25■■□□□ 1.15
SNCA-203ENST00000394986 MKRN4PQ13434 485 aaPredicted RBP22.25■■□□□ 1.15
SNCA-203ENST00000394986 OTUD6AQ7L8S5 288 aa22.25■■□□□ 1.15
SNCA-203ENST00000394986 OTOP2Q7RTS6 562 aa22.25■■□□□ 1.15
SNCA-203ENST00000394986 RPUSD2Q8IZ73 545 aaKnown RBP22.25■■□□□ 1.15
SNCA-203ENST00000394986 ZNF668Q96K58 619 aaPredicted RBP22.25■■□□□ 1.15
SNCA-203ENST00000394986 GINS2Q9Y248 185 aa22.25■■□□□ 1.15
SNCA-203ENST00000394986 KAT6AQ92794 2004 aa22.25■■□□□ 1.15
SNCA-203ENST00000394986 BRD1O95696 1058 aa22.24■■□□□ 1.15
SNCA-203ENST00000394986 CXCL10P02778 98 aa22.24■■□□□ 1.15
SNCA-203ENST00000394986 GHRP10912 638 aa22.24■■□□□ 1.15
SNCA-203ENST00000394986 CDHR5Q9HBB8 845 aa22.24■■□□□ 1.15
SNCA-203ENST00000394986 AKT3Q9Y243 479 aa22.24■■□□□ 1.15
SNCA-203ENST00000394986 TRPV2Q9Y5S1 764 aa22.24■■□□□ 1.15
SNCA-203ENST00000394986 IGKV6-21A0A0C4DH24 114 aa22.23■■□□□ 1.15
SNCA-203ENST00000394986 MAFO75444 373 aaPredicted RBP22.23■■□□□ 1.15
SNCA-203ENST00000394986 FGBP02675 491 aa22.23■■□□□ 1.15
SNCA-203ENST00000394986 POLGP54098 1239 aaPredicted RBP22.23■■□□□ 1.15
SNCA-203ENST00000394986 ZRSR1Q15695 479 aaKnown RBP22.23■■□□□ 1.15
SNCA-203ENST00000394986 KIZQ2M2Z5 673 aa22.23■■□□□ 1.15
SNCA-203ENST00000394986 KRT79Q5XKE5 535 aa22.23■■□□□ 1.15
SNCA-203ENST00000394986 RNPC3Q96LT9 517 aaKnown RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms