RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 BACH1O14867 736 aa10.04□□□□□ -0.8
ATG4A-205ENST00000394892 SLC37A4O43826 429 aa10.04□□□□□ -0.8
ATG4A-205ENST00000394892 HBP1O60381 514 aa10.04□□□□□ -0.8
ATG4A-205ENST00000394892 GPR37L1O60883 481 aa10.04□□□□□ -0.8
ATG4A-205ENST00000394892 PSMD10O75832 226 aa10.04□□□□□ -0.8
ATG4A-205ENST00000394892 GATMP50440 423 aa10.04□□□□□ -0.8
ATG4A-205ENST00000394892 USP11P51784 963 aa10.04□□□□□ -0.8
ATG4A-205ENST00000394892 AKAP17AQ02040 695 aaKnown RBP10.04□□□□□ -0.8
ATG4A-205ENST00000394892 ME3Q16798 604 aa10.04□□□□□ -0.8
ATG4A-205ENST00000394892 TSHZ1Q6ZSZ6 1077 aa10.04□□□□□ -0.8
ATG4A-205ENST00000394892 BLIDQ8IZY5 108 aa10.04□□□□□ -0.8
ATG4A-205ENST00000394892 CCDC148Q8NFR7 591 aa10.04□□□□□ -0.8
ATG4A-205ENST00000394892 ETNPPLQ8TBG4 499 aa10.04□□□□□ -0.8
ATG4A-205ENST00000394892 ZNF689Q96CS4 500 aaPredicted RBP10.04□□□□□ -0.8
ATG4A-205ENST00000394892 PHF20Q9BVI0 1012 aa10.04□□□□□ -0.8
ATG4A-205ENST00000394892 CELF4Q9BZC1 486 aaKnown RBP10.04□□□□□ -0.8
ATG4A-205ENST00000394892 TBC1D22BQ9NU19 505 aa10.04□□□□□ -0.8
ATG4A-205ENST00000394892 GABBR1Q9UBS5 961 aa10.04□□□□□ -0.8
ATG4A-205ENST00000394892 PADI3Q9ULW8 664 aa10.04□□□□□ -0.8
ATG4A-205ENST00000394892 NOC2LQ9Y3T9 749 aaKnown RBP10.04□□□□□ -0.8
ATG4A-205ENST00000394892 INSL6Q9Y581 213 aa10.04□□□□□ -0.8
ATG4A-205ENST00000394892 TRPV2Q9Y5S1 764 aa10.04□□□□□ -0.8
ATG4A-205ENST00000394892 IGSF9BQ9UPX0 1349 aa10.04□□□□□ -0.8
ATG4A-205ENST00000394892 KDM3AQ9Y4C1 1321 aa10.04□□□□□ -0.8
ATG4A-205ENST00000394892 WNT7AO00755 349 aa10.03□□□□□ -0.8
ATG4A-205ENST00000394892 GPR32O75388 356 aa10.03□□□□□ -0.8
ATG4A-205ENST00000394892 SLC26A2P50443 739 aa10.03□□□□□ -0.8
ATG4A-205ENST00000394892 ANAPC15P60006 121 aa10.03□□□□□ -0.8
ATG4A-205ENST00000394892 SETQ01105 290 aaPredicted RBP10.03□□□□□ -0.8
ATG4A-205ENST00000394892 INF2Q27J81 1249 aa10.03□□□□□ -0.8
ATG4A-205ENST00000394892 Q4G0T1 1027 aa10.03□□□□□ -0.8
ATG4A-205ENST00000394892 EPC2Q52LR7 807 aa10.03□□□□□ -0.8
ATG4A-205ENST00000394892 MCTP2Q6DN12 878 aa10.03□□□□□ -0.8
ATG4A-205ENST00000394892 MIS18BP1Q6P0N0 1132 aa10.03□□□□□ -0.8
ATG4A-205ENST00000394892 TRMT1LQ7Z2T5 733 aaKnown RBP10.03□□□□□ -0.8
ATG4A-205ENST00000394892 BICD2Q8TD16 824 aa10.03□□□□□ -0.8
ATG4A-205ENST00000394892 APBB2Q92870 758 aa10.03□□□□□ -0.8
ATG4A-205ENST00000394892 TNFRSF25Q93038 417 aa10.03□□□□□ -0.8
ATG4A-205ENST00000394892 PPP1R16BQ96T49 567 aa10.03□□□□□ -0.8
ATG4A-205ENST00000394892 KIF2CQ99661 725 aa10.03□□□□□ -0.8
ATG4A-205ENST00000394892 ERVK-5Q9HDB9 667 aa10.03□□□□□ -0.8
ATG4A-205ENST00000394892 PCDHA10Q9Y5I2 948 aa10.03□□□□□ -0.8
ATG4A-205ENST00000394892 MYO9BQ13459 2157 aa10.02□□□□□ -0.8
ATG4A-205ENST00000394892 EML1O00423 815 aa10.02□□□□□ -0.81
ATG4A-205ENST00000394892 CPLX1O14810 134 aa10.02□□□□□ -0.81
ATG4A-205ENST00000394892 JAK2O60674 1132 aa10.02□□□□□ -0.81
ATG4A-205ENST00000394892 DGKIO75912 1065 aa10.02□□□□□ -0.81
ATG4A-205ENST00000394892 VTNP04004 478 aa10.02□□□□□ -0.81
ATG4A-205ENST00000394892 ALADP13716 330 aa10.02□□□□□ -0.81
ATG4A-205ENST00000394892 SSTR3P32745 418 aaPredicted RBP10.02□□□□□ -0.81
ATG4A-205ENST00000394892 CLCN3P51790 818 aa10.02□□□□□ -0.81
ATG4A-205ENST00000394892 KRT76Q01546 638 aa10.02□□□□□ -0.81
ATG4A-205ENST00000394892 DRP2Q13474 957 aa10.02□□□□□ -0.81
ATG4A-205ENST00000394892 CAMK1Q14012 370 aa10.02□□□□□ -0.81
ATG4A-205ENST00000394892 TARBP2Q15633 366 aaKnown RBP10.02□□□□□ -0.81
ATG4A-205ENST00000394892 PTPROQ16827 1216 aa10.02□□□□□ -0.81
ATG4A-205ENST00000394892 CSPP1Q1MSJ5 1256 aa10.02□□□□□ -0.81
ATG4A-205ENST00000394892 PUS10Q3MIT2 529 aaKnown RBP10.02□□□□□ -0.81
ATG4A-205ENST00000394892 ZNF484Q5JVG2 852 aa10.02□□□□□ -0.81
ATG4A-205ENST00000394892 FAM160B1Q5W0V3 765 aa10.02□□□□□ -0.81
ATG4A-205ENST00000394892 RSPH3Q86UC2 560 aa10.02□□□□□ -0.81
ATG4A-205ENST00000394892 TMEM192Q8IY95 271 aa10.02□□□□□ -0.81
ATG4A-205ENST00000394892 SMAP1Q8IYB5 467 aaPredicted RBP10.02□□□□□ -0.81
ATG4A-205ENST00000394892 TRIM22Q8IYM9 498 aa10.02□□□□□ -0.81
ATG4A-205ENST00000394892 BBXQ8WY36 941 aaPredicted RBP10.02□□□□□ -0.81
ATG4A-205ENST00000394892 HAS1Q92839 578 aa10.02□□□□□ -0.81
ATG4A-205ENST00000394892 ZNF668Q96K58 619 aaPredicted RBP10.02□□□□□ -0.81
ATG4A-205ENST00000394892 YME1L1Q96TA2 773 aa10.02□□□□□ -0.81
ATG4A-205ENST00000394892 RIT2Q99578 217 aa10.02□□□□□ -0.81
ATG4A-205ENST00000394892 SH2D3AQ9BRG2 576 aa10.02□□□□□ -0.81
ATG4A-205ENST00000394892 SLKQ9H2G2 1235 aaPredicted RBP10.02□□□□□ -0.81
ATG4A-205ENST00000394892 ADAMTS10Q9H324 1103 aa10.02□□□□□ -0.81
ATG4A-205ENST00000394892 KCNMB3Q9NPA1 279 aa10.02□□□□□ -0.81
ATG4A-205ENST00000394892 DISC1Q9NRI5 854 aa10.02□□□□□ -0.81
ATG4A-205ENST00000394892 WRAP73Q9P2S5 460 aaPredicted RBP10.02□□□□□ -0.81
ATG4A-205ENST00000394892 VAV3Q9UKW4 847 aa10.02□□□□□ -0.81
ATG4A-205ENST00000394892 SQORQ9Y6N5 450 aa10.02□□□□□ -0.81
ATG4A-205ENST00000394892 STK36Q9NRP7 1315 aa10.02□□□□□ -0.81
ATG4A-205ENST00000394892 COL1A2P08123 1366 aa10.01□□□□□ -0.81
ATG4A-205ENST00000394892 SIP14410 1827 aa10.01□□□□□ -0.81
ATG4A-205ENST00000394892 WDR64B1ANS9 1081 aa10.01□□□□□ -0.81
ATG4A-205ENST00000394892 PI4K2BG5E9Z4 385 aa10.01□□□□□ -0.81
ATG4A-205ENST00000394892 H3BNC9 293 aa10.01□□□□□ -0.81
ATG4A-205ENST00000394892 CHMP2AO43633 222 aa10.01□□□□□ -0.81
ATG4A-205ENST00000394892 PSAPP07602 524 aa10.01□□□□□ -0.81
ATG4A-205ENST00000394892 PRKCEQ02156 737 aa10.01□□□□□ -0.81
ATG4A-205ENST00000394892 NR5A1Q13285 461 aa10.01□□□□□ -0.81
ATG4A-205ENST00000394892 DSC3Q14574 896 aa10.01□□□□□ -0.81
ATG4A-205ENST00000394892 KIZQ2M2Z5 673 aa10.01□□□□□ -0.81
ATG4A-205ENST00000394892 LRCH2Q5VUJ6 765 aa10.01□□□□□ -0.81
ATG4A-205ENST00000394892 IER5Q5VY09 327 aa10.01□□□□□ -0.81
ATG4A-205ENST00000394892 FAM228AQ86W67 206 aa10.01□□□□□ -0.81
ATG4A-205ENST00000394892 GJD3Q8N144 294 aa10.01□□□□□ -0.81
ATG4A-205ENST00000394892 NME8Q8N427 588 aa10.01□□□□□ -0.81
ATG4A-205ENST00000394892 LRRC71Q8N4P6 559 aa10.01□□□□□ -0.81
ATG4A-205ENST00000394892 ZNF579Q8NAF0 562 aaKnown RBP10.01□□□□□ -0.81
ATG4A-205ENST00000394892 NSUN7Q8NE18 718 aaKnown RBP10.01□□□□□ -0.81
ATG4A-205ENST00000394892 FBXO22Q8NEZ5 403 aa10.01□□□□□ -0.81
ATG4A-205ENST00000394892 CLP1Q92989 425 aaKnown RBP10.01□□□□□ -0.81
ATG4A-205ENST00000394892 UBE2ZQ9H832 354 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms