RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 NDUFB10O96000 172 aa9.87□□□□□ -0.83
CDH11-202ENST00000394156 FOSP01100 380 aaPredicted RBP9.87□□□□□ -0.83
CDH11-202ENST00000394156 PCP11498 1178 aaKnown RBP9.87□□□□□ -0.83
CDH11-202ENST00000394156 ADORA2BP29275 332 aa9.87□□□□□ -0.83
CDH11-202ENST00000394156 SESN3P58005 492 aa9.87□□□□□ -0.83
CDH11-202ENST00000394156 SHROOM1Q2M3G4 852 aaPredicted RBP9.87□□□□□ -0.83
CDH11-202ENST00000394156 FOXP4Q8IVH2 680 aaPredicted RBP9.87□□□□□ -0.83
CDH11-202ENST00000394156 VSTM4Q8IW00 320 aa9.87□□□□□ -0.83
CDH11-202ENST00000394156 NAP1L3Q99457 506 aaPredicted RBP9.87□□□□□ -0.83
CDH11-202ENST00000394156 FEM1BQ9UK73 627 aa9.87□□□□□ -0.83
CDH11-202ENST00000394156 DNAJC12Q9UKB3 198 aa9.87□□□□□ -0.83
CDH11-202ENST00000394156 LTN1O94822 1766 aa9.87□□□□□ -0.83
CDH11-202ENST00000394156 E2F8A0AVK6 867 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 ATMINO43313 823 aaPredicted RBP9.86□□□□□ -0.83
CDH11-202ENST00000394156 OATP04181 439 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 H2AFZP0C0S5 128 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 COL9A3Q14050 684 aaPredicted RBP9.86□□□□□ -0.83
CDH11-202ENST00000394156 H2AFVQ71UI9 128 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 LRRC45Q96CN5 670 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 CHP1Q99653 195 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 MAD2L2Q9UI95 211 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 RGS16O15492 202 aaPredicted RBP9.86□□□□□ -0.83
CDH11-202ENST00000394156 STK10O94804 968 aaKnown RBP9.86□□□□□ -0.83
CDH11-202ENST00000394156 PDHBP11177 359 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 GYS1P13807 737 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 KCNH2Q12809 1159 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 TWF2Q6IBS0 349 aaKnown RBP9.86□□□□□ -0.83
CDH11-202ENST00000394156 RSRC2Q7L4I2 434 aaKnown RBP9.86□□□□□ -0.83
CDH11-202ENST00000394156 ZFPM1Q8IX07 1006 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 MCUQ8NE86 351 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 RAB3IL1Q8TBN0 382 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.86□□□□□ -0.83
CDH11-202ENST00000394156 SREK1Q8WXA9 508 aaKnown RBP9.86□□□□□ -0.83
CDH11-202ENST00000394156 CCT6BQ92526 530 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 WDR11Q9BZH6 1224 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 MTMR4Q9NYA4 1195 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 HESX1Q9UBX0 185 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 HEY1Q9Y5J3 304 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 CD163L1Q9NR16 1453 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 A6NJR5 290 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 SLC37A4O43826 429 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 CREB3O43889 395 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 ATF2P15336 505 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 SEPT6Q14141 434 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 STXBP2Q15833 593 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 RAPH1Q70E73 1250 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 EXT2Q93063 718 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 ACSF2Q96CM8 615 aaPredicted RBP9.86□□□□□ -0.83
CDH11-202ENST00000394156 ADD3Q9UEY8 706 aaKnown RBP9.86□□□□□ -0.83
CDH11-202ENST00000394156 AFG3L2Q9Y4W6 797 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 FRMPD1Q5SYB0 1578 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 KIAA1210Q9ULL0 1709 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 ACSL3O95573 720 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 LCP1P13796 627 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 CYP2B6P20813 491 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 YWHAGP61981 247 aaKnown RBP eCLIP9.86□□□□□ -0.83
CDH11-202ENST00000394156 FKBP3Q00688 224 aaKnown RBP9.86□□□□□ -0.83
CDH11-202ENST00000394156 TMED2Q15363 201 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 SGO2Q562F6 1265 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 RSBN1LQ6PCB5 846 aaPredicted RBP9.86□□□□□ -0.83
CDH11-202ENST00000394156 SCN4BQ8IWT1 228 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 ALKBH8Q96BT7 664 aaKnown RBP9.86□□□□□ -0.83
CDH11-202ENST00000394156 DHTKD1Q96HY7 919 aaPredicted RBP9.86□□□□□ -0.83
CDH11-202ENST00000394156 MTRQ99707 1265 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 FAM8A1Q9UBU6 413 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 MYOM1P52179 1685 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 TMEM150BA6NC51 233 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 NR3C1P04150 777 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 CATSPER4Q7RTX7 472 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 GRAP2O75791 330 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 RASA1P20936 1047 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 PTPREP23469 700 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 MXI1P50539 228 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 DSTYKQ6XUX3 929 aa9.86□□□□□ -0.83
CDH11-202ENST00000394156 PURBQ96QR8 312 aaKnown RBP9.86□□□□□ -0.83
CDH11-202ENST00000394156 FBXO2Q9UK22 296 aaPredicted RBP9.86□□□□□ -0.83
CDH11-202ENST00000394156 CSF1RP07333 972 aa9.85□□□□□ -0.83
CDH11-202ENST00000394156 FDPSP14324 419 aaKnown RBP9.85□□□□□ -0.83
CDH11-202ENST00000394156 AK8Q96MA6 479 aa9.85□□□□□ -0.83
CDH11-202ENST00000394156 STK24Q9Y6E0 443 aa9.85□□□□□ -0.83
CDH11-202ENST00000394156 RSPH10B2B2RC85 870 aa9.85□□□□□ -0.83
CDH11-202ENST00000394156 MYO1FO00160 1098 aa9.85□□□□□ -0.83
CDH11-202ENST00000394156 RSPH10BP0C881 870 aa9.85□□□□□ -0.83
CDH11-202ENST00000394156 YWHABP31946 246 aaKnown RBP9.85□□□□□ -0.83
CDH11-202ENST00000394156 PAK2Q13177 524 aa9.85□□□□□ -0.83
CDH11-202ENST00000394156 DARS2Q6PI48 645 aaKnown RBP9.85□□□□□ -0.83
CDH11-202ENST00000394156 ABHD10Q9NUJ1 306 aa9.85□□□□□ -0.83
CDH11-202ENST00000394156 HPS5Q9UPZ3 1129 aa9.85□□□□□ -0.83
CDH11-202ENST00000394156 FRMD3A2A2Y4 597 aa9.85□□□□□ -0.83
CDH11-202ENST00000394156 CLDN3O15551 220 aa9.85□□□□□ -0.83
CDH11-202ENST00000394156 KIAA1841Q6NSI8 718 aa9.85□□□□□ -0.83
CDH11-202ENST00000394156 TRIML1Q8N9V2 468 aa9.85□□□□□ -0.83
CDH11-202ENST00000394156 CPA5Q8WXQ8 436 aa9.85□□□□□ -0.83
CDH11-202ENST00000394156 AGPAT5Q9NUQ2 364 aa9.85□□□□□ -0.83
CDH11-202ENST00000394156 VGLL3A8MV65 326 aa9.85□□□□□ -0.83
CDH11-202ENST00000394156 LAD1O00515 517 aa9.85□□□□□ -0.83
CDH11-202ENST00000394156 CCDC14Q49A88 953 aa9.85□□□□□ -0.83
CDH11-202ENST00000394156 TBC1D31Q96DN5 1066 aa9.85□□□□□ -0.83
CDH11-202ENST00000394156 ATXN7L3BQ96GX2 97 aa9.85□□□□□ -0.83
CDH11-202ENST00000394156 PPP1R36Q96LQ0 422 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms