RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 ATP8B4Q8TF62 1192 aa17.55■□□□□ 0.4
CHMP3-202ENST00000393773 SUSD6Q92537 303 aa17.55■□□□□ 0.4
CHMP3-202ENST00000393773 TNPO1Q92973 898 aaKnown RBP17.55■□□□□ 0.4
CHMP3-202ENST00000393773 LRRC2Q9BYS8 371 aa17.55■□□□□ 0.4
CHMP3-202ENST00000393773 ANO3Q9BYT9 981 aa17.55■□□□□ 0.4
CHMP3-202ENST00000393773 TLR9Q9NR96 1032 aa17.55■□□□□ 0.4
CHMP3-202ENST00000393773 LRFN2Q9ULH4 789 aa17.55■□□□□ 0.4
CHMP3-202ENST00000393773 NOC2LQ9Y3T9 749 aaKnown RBP17.55■□□□□ 0.4
CHMP3-202ENST00000393773 SLC12A7Q9Y666 1083 aa17.55■□□□□ 0.4
CHMP3-202ENST00000393773 COL1A2P08123 1366 aa17.54■□□□□ 0.4
CHMP3-202ENST00000393773 ZBTB42B2RXF5 422 aa17.54■□□□□ 0.4
CHMP3-202ENST00000393773 SLC27A2O14975 620 aa17.54■□□□□ 0.4
CHMP3-202ENST00000393773 DUSP6Q16828 381 aa17.54■□□□□ 0.4
CHMP3-202ENST00000393773 IER5LQ5T953 404 aa17.54■□□□□ 0.4
CHMP3-202ENST00000393773 CCDC60Q8IWA6 550 aaPredicted RBP17.54■□□□□ 0.4
CHMP3-202ENST00000393773 PHF7Q9BWX1 381 aaPredicted RBP17.54■□□□□ 0.4
CHMP3-202ENST00000393773 CDHR5Q9HBB8 845 aa17.54■□□□□ 0.4
CHMP3-202ENST00000393773 RIC8AQ9NPQ8 531 aa17.54■□□□□ 0.4
CHMP3-202ENST00000393773 TBKBP1A7MCY6 615 aa17.53■□□□□ 0.4
CHMP3-202ENST00000393773 C9IYK1 514 aa17.53■□□□□ 0.4
CHMP3-202ENST00000393773 FSCN2O14926 492 aa17.53■□□□□ 0.4
CHMP3-202ENST00000393773 IBSPP21815 317 aaPredicted RBP17.53■□□□□ 0.4
CHMP3-202ENST00000393773 KLRC1P26715 233 aa17.53■□□□□ 0.4
CHMP3-202ENST00000393773 SREBF1P36956 1147 aa17.53■□□□□ 0.4
CHMP3-202ENST00000393773 NAPAP54920 295 aa17.53■□□□□ 0.4
CHMP3-202ENST00000393773 NFX1Q12986 1120 aaKnown RBP17.53■□□□□ 0.4
CHMP3-202ENST00000393773 FAM43BQ6ZT52 329 aaPredicted RBP17.53■□□□□ 0.4
CHMP3-202ENST00000393773 TEX2Q8IWB9 1127 aa17.53■□□□□ 0.4
CHMP3-202ENST00000393773 KIAA0319LQ8IZA0 1049 aa17.53■□□□□ 0.4
CHMP3-202ENST00000393773 COLGALT1Q8NBJ5 622 aa17.53■□□□□ 0.4
CHMP3-202ENST00000393773 PBXIP1Q96AQ6 731 aa17.53■□□□□ 0.4
CHMP3-202ENST00000393773 TLE6Q9H808 572 aa17.53■□□□□ 0.4
CHMP3-202ENST00000393773 RGS18Q9NS28 235 aa17.53■□□□□ 0.4
CHMP3-202ENST00000393773 C1orf112Q9NSG2 853 aa17.53■□□□□ 0.4
CHMP3-202ENST00000393773 VPS13AQ96RL7 3174 aa17.53■□□□□ 0.4
CHMP3-202ENST00000393773 MEIS1O00470 390 aa17.52■□□□□ 0.4
CHMP3-202ENST00000393773 PER2O15055 1255 aa17.52■□□□□ 0.4
CHMP3-202ENST00000393773 PPFIA3O75145 1194 aa17.52■□□□□ 0.4
CHMP3-202ENST00000393773 RPS6KA5O75582 802 aa17.52■□□□□ 0.4
CHMP3-202ENST00000393773 FGF18O76093 207 aa17.52■□□□□ 0.4
CHMP3-202ENST00000393773 ATF7P17544 494 aaPredicted RBP17.52■□□□□ 0.4
CHMP3-202ENST00000393773 CLK2P49760 499 aaKnown RBP17.52■□□□□ 0.4
CHMP3-202ENST00000393773 ADCY7P51828 1080 aa17.52■□□□□ 0.4
CHMP3-202ENST00000393773 ERVFC1P60507 584 aa17.52■□□□□ 0.4
CHMP3-202ENST00000393773 FUT2Q10981 343 aa17.52■□□□□ 0.4
CHMP3-202ENST00000393773 TCF15Q12870 199 aa17.52■□□□□ 0.4
CHMP3-202ENST00000393773 KCNC3Q14003 757 aa17.52■□□□□ 0.4
CHMP3-202ENST00000393773 FAM102BQ5T8I3 360 aa17.52■□□□□ 0.4
CHMP3-202ENST00000393773 CREB3L3Q68CJ9 461 aa17.52■□□□□ 0.4
CHMP3-202ENST00000393773 APOA5Q6Q788 366 aa17.52■□□□□ 0.4
CHMP3-202ENST00000393773 ABHD15Q6UXT9 468 aa17.52■□□□□ 0.4
CHMP3-202ENST00000393773 ASIC4Q96FT7 647 aa17.52■□□□□ 0.4
CHMP3-202ENST00000393773 CDCA3Q99618 268 aaPredicted RBP17.52■□□□□ 0.4
CHMP3-202ENST00000393773 ADAM2Q99965 735 aa17.52■□□□□ 0.4
CHMP3-202ENST00000393773 CWH43Q9H720 699 aa17.52■□□□□ 0.4
CHMP3-202ENST00000393773 GINS2Q9Y248 185 aa17.52■□□□□ 0.4
CHMP3-202ENST00000393773 PCDHB7Q9Y5E2 793 aa17.52■□□□□ 0.4
CHMP3-202ENST00000393773 PCDHB12Q9Y5F1 795 aa17.52■□□□□ 0.4
CHMP3-202ENST00000393773 DMDP11532 3685 aa17.52■□□□□ 0.39
CHMP3-202ENST00000393773 FSD2A1L4K1 749 aa17.51■□□□□ 0.39
CHMP3-202ENST00000393773 DENND3A2RUS2 1198 aa17.51■□□□□ 0.39
CHMP3-202ENST00000393773 HBP1O60381 514 aa17.51■□□□□ 0.39
CHMP3-202ENST00000393773 C22orf31O95567 290 aa17.51■□□□□ 0.39
CHMP3-202ENST00000393773 FOSP01100 380 aaPredicted RBP17.51■□□□□ 0.39
CHMP3-202ENST00000393773 PTPN5P54829 565 aa17.51■□□□□ 0.39
CHMP3-202ENST00000393773 SLC24A5Q71RS6 500 aa17.51■□□□□ 0.39
CHMP3-202ENST00000393773 FAM228AQ86W67 206 aa17.51■□□□□ 0.39
CHMP3-202ENST00000393773 FBXL6Q8N531 539 aa17.51■□□□□ 0.39
CHMP3-202ENST00000393773 AAASQ9NRG9 546 aa17.51■□□□□ 0.39
CHMP3-202ENST00000393773 TMEM260Q9NX78 707 aa17.51■□□□□ 0.39
CHMP3-202ENST00000393773 ST3GAL5Q9UNP4 418 aa17.51■□□□□ 0.39
CHMP3-202ENST00000393773 IGLV3-22A0A075B6J6 115 aa17.5■□□□□ 0.39
CHMP3-202ENST00000393773 FAM86B1E9PN63 330 aa17.5■□□□□ 0.39
CHMP3-202ENST00000393773 hCG_1984214I3L0E3 225 aa17.5■□□□□ 0.39
CHMP3-202ENST00000393773 DDX39AO00148 427 aaKnown RBP17.5■□□□□ 0.39
CHMP3-202ENST00000393773 BACH1O14867 736 aa17.5■□□□□ 0.39
CHMP3-202ENST00000393773 DHX15O43143 795 aaKnown RBP17.5■□□□□ 0.39
CHMP3-202ENST00000393773 FAM86B2P0C5J1 330 aa17.5■□□□□ 0.39
CHMP3-202ENST00000393773 FGFR1P11362 822 aa17.5■□□□□ 0.39
CHMP3-202ENST00000393773 ATP4AP20648 1035 aa17.5■□□□□ 0.39
CHMP3-202ENST00000393773 SIGLEC14Q08ET2 396 aa17.5■□□□□ 0.39
CHMP3-202ENST00000393773 AP3B2Q13367 1082 aa17.5■□□□□ 0.39
CHMP3-202ENST00000393773 DSC3Q14574 896 aa17.5■□□□□ 0.39
CHMP3-202ENST00000393773 NECTIN1Q15223 517 aa17.5■□□□□ 0.39
CHMP3-202ENST00000393773 PKN1Q16512 942 aa17.5■□□□□ 0.39
CHMP3-202ENST00000393773 SPOUT1Q5T280 376 aaKnown RBP17.5■□□□□ 0.39
CHMP3-202ENST00000393773 FAM160B1Q5W0V3 765 aa17.5■□□□□ 0.39
CHMP3-202ENST00000393773 NIPA1Q7RTP0 329 aa17.5■□□□□ 0.39
CHMP3-202ENST00000393773 SUGP1Q8IWZ8 645 aaKnown RBP17.5■□□□□ 0.39
CHMP3-202ENST00000393773 THNSL1Q8IYQ7 743 aa17.5■□□□□ 0.39
CHMP3-202ENST00000393773 ZNF713Q8N859 430 aaPredicted RBP17.5■□□□□ 0.39
CHMP3-202ENST00000393773 CRYGNQ8WXF5 182 aa17.5■□□□□ 0.39
CHMP3-202ENST00000393773 RPGRIP1Q96KN7 1286 aa17.5■□□□□ 0.39
CHMP3-202ENST00000393773 YTHDC1Q96MU7 727 aaKnown RBP17.5■□□□□ 0.39
CHMP3-202ENST00000393773 NEK1Q96PY6 1258 aa17.5■□□□□ 0.39
CHMP3-202ENST00000393773 PPP1R16BQ96T49 567 aa17.5■□□□□ 0.39
CHMP3-202ENST00000393773 OSMRQ99650 979 aa17.5■□□□□ 0.39
CHMP3-202ENST00000393773 ESYT1Q9BSJ8 1104 aa17.5■□□□□ 0.39
CHMP3-202ENST00000393773 RNF19AQ9NV58 838 aa17.5■□□□□ 0.39
CHMP3-202ENST00000393773 TYW1Q9NV66 732 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms