RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 SPATS2LQ9NUQ6 558 aaKnown RBP11.46□□□□□ -0.57
CALD1-203ENST00000393118 NUP98P52948 1817 aa11.46□□□□□ -0.57
CALD1-203ENST00000393118 GAKO14976 1311 aa11.46□□□□□ -0.57
CALD1-203ENST00000393118 GAP43P17677 238 aa11.46□□□□□ -0.57
CALD1-203ENST00000393118 SCP2P22307 547 aa11.46□□□□□ -0.57
CALD1-203ENST00000393118 TTLL12Q14166 644 aaPredicted RBP11.46□□□□□ -0.57
CALD1-203ENST00000393118 ARHGEF16Q5VV41 709 aa11.46□□□□□ -0.57
CALD1-203ENST00000393118 WDR59Q6PJI9 974 aa11.46□□□□□ -0.57
CALD1-203ENST00000393118 PPP4R3CPQ6ZMV5 832 aa11.46□□□□□ -0.57
CALD1-203ENST00000393118 MTMR9Q96QG7 549 aa11.46□□□□□ -0.57
CALD1-203ENST00000393118 WDR11Q9BZH6 1224 aa11.46□□□□□ -0.57
CALD1-203ENST00000393118 BAIAP2L1Q9UHR4 511 aa11.46□□□□□ -0.57
CALD1-203ENST00000393118 RGL2O15211 777 aa11.46□□□□□ -0.58
CALD1-203ENST00000393118 ZBED4O75132 1171 aa11.46□□□□□ -0.58
CALD1-203ENST00000393118 GGCXP38435 758 aa11.46□□□□□ -0.58
CALD1-203ENST00000393118 PPFIA1Q13136 1202 aa11.46□□□□□ -0.58
CALD1-203ENST00000393118 NLRX1Q86UT6 975 aa11.46□□□□□ -0.58
CALD1-203ENST00000393118 PROCA1Q8NCQ7 364 aaPredicted RBP11.46□□□□□ -0.58
CALD1-203ENST00000393118 TRIM6Q9C030 488 aaPredicted RBP11.46□□□□□ -0.58
CALD1-203ENST00000393118 STIM2Q9P246 746 aa11.46□□□□□ -0.58
CALD1-203ENST00000393118 COL14A1Q05707 1796 aaKnown RBP11.46□□□□□ -0.58
CALD1-203ENST00000393118 HOXA10P31260 410 aaPredicted RBP11.46□□□□□ -0.58
CALD1-203ENST00000393118 USP37Q86T82 979 aa11.46□□□□□ -0.58
CALD1-203ENST00000393118 ZNF507Q8TCN5 953 aa11.46□□□□□ -0.58
CALD1-203ENST00000393118 NUP188Q5SRE5 1749 aa11.45□□□□□ -0.58
CALD1-203ENST00000393118 RCCD1A6NED2 376 aa11.45□□□□□ -0.58
CALD1-203ENST00000393118 BEND6Q5SZJ8 279 aaPredicted RBP11.45□□□□□ -0.58
CALD1-203ENST00000393118 TRAPPC11Q7Z392 1133 aa11.45□□□□□ -0.58
CALD1-203ENST00000393118 CCDC50Q8IVM0 306 aa11.45□□□□□ -0.58
CALD1-203ENST00000393118 TTLL6Q8N841 843 aa11.45□□□□□ -0.58
CALD1-203ENST00000393118 FNBP1Q96RU3 617 aa11.45□□□□□ -0.58
CALD1-203ENST00000393118 PICK1Q9NRD5 415 aa11.45□□□□□ -0.58
CALD1-203ENST00000393118 UTP11Q9Y3A2 253 aaKnown RBP11.45□□□□□ -0.58
CALD1-203ENST00000393118 BZW2Q9Y6E2 419 aaKnown RBP11.45□□□□□ -0.58
CALD1-203ENST00000393118 IPO5O00410 1097 aaKnown RBP11.45□□□□□ -0.58
CALD1-203ENST00000393118 CRY2Q49AN0 593 aa11.45□□□□□ -0.58
CALD1-203ENST00000393118 GJB7Q6PEY0 223 aa11.45□□□□□ -0.58
CALD1-203ENST00000393118 SYCE1Q8N0S2 351 aa11.45□□□□□ -0.58
CALD1-203ENST00000393118 UHMK1Q8TAS1 419 aaKnown RBP11.45□□□□□ -0.58
CALD1-203ENST00000393118 HAS1Q92839 578 aa11.45□□□□□ -0.58
CALD1-203ENST00000393118 TBC1D31Q96DN5 1066 aa11.45□□□□□ -0.58
CALD1-203ENST00000393118 TAOK3Q9H2K8 898 aa11.45□□□□□ -0.58
CALD1-203ENST00000393118 RAVER2Q9HCJ3 691 aaKnown RBP11.45□□□□□ -0.58
CALD1-203ENST00000393118 UBE2TQ9NPD8 197 aaPredicted RBP11.45□□□□□ -0.58
CALD1-203ENST00000393118 TYW1Q9NV66 732 aaKnown RBP11.45□□□□□ -0.58
CALD1-203ENST00000393118 IRAK4Q9NWZ3 460 aa11.45□□□□□ -0.58
CALD1-203ENST00000393118 LAMA4Q16363 1823 aa11.45□□□□□ -0.58
CALD1-203ENST00000393118 STRCP1A6NGW2 1772 aa11.45□□□□□ -0.58
CALD1-203ENST00000393118 MSH4O15457 936 aa11.45□□□□□ -0.58
CALD1-203ENST00000393118 BUB1BO60566 1050 aaPredicted RBP11.45□□□□□ -0.58
CALD1-203ENST00000393118 FERP16591 822 aa11.45□□□□□ -0.58
CALD1-203ENST00000393118 KLRC1P26715 233 aa11.45□□□□□ -0.58
CALD1-203ENST00000393118 CERKQ8TCT0 537 aa11.45□□□□□ -0.58
CALD1-203ENST00000393118 SCFD1Q8WVM8 642 aa11.45□□□□□ -0.58
CALD1-203ENST00000393118 ZDHHC15Q96MV8 337 aa11.45□□□□□ -0.58
CALD1-203ENST00000393118 LXNQ9BS40 222 aa11.45□□□□□ -0.58
CALD1-203ENST00000393118 TMEM39BQ9GZU3 492 aa11.45□□□□□ -0.58
CALD1-203ENST00000393118 DNAJC12Q9UKB3 198 aa11.45□□□□□ -0.58
CALD1-203ENST00000393118 BCL9LQ86UU0 1499 aa11.44□□□□□ -0.58
CALD1-203ENST00000393118 A0A087X0T9 212 aa11.44□□□□□ -0.58
CALD1-203ENST00000393118 FAM228BP0C875 321 aa11.44□□□□□ -0.58
CALD1-203ENST00000393118 EPHB4P54760 987 aa11.44□□□□□ -0.58
CALD1-203ENST00000393118 CORO7P57737 925 aa11.44□□□□□ -0.58
CALD1-203ENST00000393118 EZH2Q15910 746 aaKnown RBP11.44□□□□□ -0.58
CALD1-203ENST00000393118 CAPS2Q9BXY5 557 aa11.44□□□□□ -0.58
CALD1-203ENST00000393118 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.44□□□□□ -0.58
CALD1-203ENST00000393118 REXO2Q9Y3B8 237 aaKnown RBP11.44□□□□□ -0.58
CALD1-203ENST00000393118 TJP1Q07157 1748 aa11.44□□□□□ -0.58
CALD1-203ENST00000393118 PPP1R11O60927 126 aaPredicted RBP11.44□□□□□ -0.58
CALD1-203ENST00000393118 UCHL3P15374 230 aa11.44□□□□□ -0.58
CALD1-203ENST00000393118 RPA1P27694 616 aa11.44□□□□□ -0.58
CALD1-203ENST00000393118 CASP4P49662 377 aa11.44□□□□□ -0.58
CALD1-203ENST00000393118 PRELPP51888 382 aa11.44□□□□□ -0.58
CALD1-203ENST00000393118 MESDQ14696 234 aa11.44□□□□□ -0.58
CALD1-203ENST00000393118 ECM1Q16610 540 aa11.44□□□□□ -0.58
CALD1-203ENST00000393118 CEP55Q53EZ4 464 aa11.44□□□□□ -0.58
CALD1-203ENST00000393118 LDHDQ86WU2 507 aa11.44□□□□□ -0.58
CALD1-203ENST00000393118 GLYCTKQ8IVS8 523 aa11.44□□□□□ -0.58
CALD1-203ENST00000393118 SELENOSQ9BQE4 189 aa11.44□□□□□ -0.58
CALD1-203ENST00000393118 RUSC1Q9BVN2 902 aa11.44□□□□□ -0.58
CALD1-203ENST00000393118 H3BQF6 201 aa11.44□□□□□ -0.58
CALD1-203ENST00000393118 CTNNA1P35221 906 aaKnown RBP11.44□□□□□ -0.58
CALD1-203ENST00000393118 GCLMP48507 274 aa11.44□□□□□ -0.58
CALD1-203ENST00000393118 PEX3P56589 373 aa11.44□□□□□ -0.58
CALD1-203ENST00000393118 EN1Q05925 392 aaPredicted RBP11.44□□□□□ -0.58
CALD1-203ENST00000393118 PPP1R7Q15435 360 aa11.44□□□□□ -0.58
CALD1-203ENST00000393118 SEL1L2Q5TEA6 688 aa11.44□□□□□ -0.58
CALD1-203ENST00000393118 PNMA8AQ86V59 439 aaPredicted RBP11.44□□□□□ -0.58
CALD1-203ENST00000393118 RASAL2Q9UJF2 1139 aa11.44□□□□□ -0.58
CALD1-203ENST00000393118 ADAMTS7Q9UKP4 1686 aa11.44□□□□□ -0.58
CALD1-203ENST00000393118 A0A1W2PQJ5 194 aa11.43□□□□□ -0.58
CALD1-203ENST00000393118 MIIPQ5JXC2 388 aa11.43□□□□□ -0.58
CALD1-203ENST00000393118 PADI6Q6TGC4 694 aa11.43□□□□□ -0.58
CALD1-203ENST00000393118 C15orf52Q6ZUT6 534 aaKnown RBP11.43□□□□□ -0.58
CALD1-203ENST00000393118 PACSIN1Q9BY11 444 aa11.43□□□□□ -0.58
CALD1-203ENST00000393118 AKAP11Q9UKA4 1901 aa11.43□□□□□ -0.58
CALD1-203ENST00000393118 FANCGO15287 622 aa11.43□□□□□ -0.58
CALD1-203ENST00000393118 EYA4O95677 639 aa11.43□□□□□ -0.58
CALD1-203ENST00000393118 ASNSP08243 561 aa11.43□□□□□ -0.58
CALD1-203ENST00000393118 TNNI1P19237 187 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms