RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 GOLGA8IPA6NC78 632 aa13.64□□□□□ -0.23
CLTC-202ENST00000393043 GOLGA8JA6NMD2 632 aa13.64□□□□□ -0.23
CLTC-202ENST00000393043 CNGA1P29973 690 aa13.64□□□□□ -0.23
CLTC-202ENST00000393043 KCTD16Q68DU8 428 aa13.64□□□□□ -0.23
CLTC-202ENST00000393043 EXOC4Q96A65 974 aa13.64□□□□□ -0.23
CLTC-202ENST00000393043 RAVER2Q9HCJ3 691 aaKnown RBP13.64□□□□□ -0.23
CLTC-202ENST00000393043 NXF1Q9UBU9 619 aaKnown RBP13.64□□□□□ -0.23
CLTC-202ENST00000393043 LIMA1Q9UHB6 759 aaKnown RBP13.64□□□□□ -0.23
CLTC-202ENST00000393043 LCMT1Q9UIC8 334 aa13.64□□□□□ -0.23
CLTC-202ENST00000393043 ATP8A1Q9Y2Q0 1164 aa13.64□□□□□ -0.23
CLTC-202ENST00000393043 TEX33O43247 280 aa13.64□□□□□ -0.23
CLTC-202ENST00000393043 BUB1BO60566 1050 aaPredicted RBP13.64□□□□□ -0.23
CLTC-202ENST00000393043 IL9RQ01113 521 aa13.64□□□□□ -0.23
CLTC-202ENST00000393043 DR1Q01658 176 aa13.64□□□□□ -0.23
CLTC-202ENST00000393043 GABPAQ06546 454 aa13.64□□□□□ -0.23
CLTC-202ENST00000393043 HHIPL2Q6UWX4 724 aa13.64□□□□□ -0.23
CLTC-202ENST00000393043 NME8Q8N427 588 aa13.64□□□□□ -0.23
CLTC-202ENST00000393043 ATF5Q9Y2D1 282 aaPredicted RBP13.64□□□□□ -0.23
CLTC-202ENST00000393043 DCCP43146 1447 aa13.64□□□□□ -0.23
CLTC-202ENST00000393043 TTC26A0AVF1 554 aa13.63□□□□□ -0.23
CLTC-202ENST00000393043 POTEFA5A3E0 1075 aa13.63□□□□□ -0.23
CLTC-202ENST00000393043 MCF2LO15068 1137 aa13.63□□□□□ -0.23
CLTC-202ENST00000393043 POTEIP0CG38 1075 aa13.63□□□□□ -0.23
CLTC-202ENST00000393043 POTEGQ6S5H5 508 aa13.63□□□□□ -0.23
CLTC-202ENST00000393043 POTEEQ6S8J3 1075 aa13.63□□□□□ -0.23
CLTC-202ENST00000393043 C16orf86Q6ZW13 317 aa13.63□□□□□ -0.23
CLTC-202ENST00000393043 APOBEC3FQ8IUX4 373 aaKnown RBP13.63□□□□□ -0.23
CLTC-202ENST00000393043 BANK1Q8NDB2 785 aa13.63□□□□□ -0.23
CLTC-202ENST00000393043 RAB3IPQ96QF0 476 aaPredicted RBP13.63□□□□□ -0.23
CLTC-202ENST00000393043 CNOT10Q9H9A5 744 aaKnown RBP13.63□□□□□ -0.23
CLTC-202ENST00000393043 RNF146Q9NTX7 359 aa13.63□□□□□ -0.23
CLTC-202ENST00000393043 BCAP29Q9UHQ4 241 aa13.63□□□□□ -0.23
CLTC-202ENST00000393043 SLIT1O75093 1534 aa13.63□□□□□ -0.23
CLTC-202ENST00000393043 GOLGA8SH3BPF8 625 aa13.63□□□□□ -0.23
CLTC-202ENST00000393043 FDPSP14324 419 aaKnown RBP13.63□□□□□ -0.23
CLTC-202ENST00000393043 GARSP41250 739 aaKnown RBP13.63□□□□□ -0.23
CLTC-202ENST00000393043 ELOA2Q8IYF1 753 aaPredicted RBP13.63□□□□□ -0.23
CLTC-202ENST00000393043 NLRP7Q8WX94 980 aa13.63□□□□□ -0.23
CLTC-202ENST00000393043 TRIM9Q9C026 710 aa13.63□□□□□ -0.23
CLTC-202ENST00000393043 NYAP2Q9P242 653 aa13.63□□□□□ -0.23
CLTC-202ENST00000393043 FAN1Q9Y2M0 1017 aa13.63□□□□□ -0.23
CLTC-202ENST00000393043 KIF20BQ96Q89 1820 aa13.63□□□□□ -0.23
CLTC-202ENST00000393043 IPO5O00410 1097 aaKnown RBP13.63□□□□□ -0.23
CLTC-202ENST00000393043 YWHAGP61981 247 aaKnown RBP eCLIP13.63□□□□□ -0.23
CLTC-202ENST00000393043 ITPK1Q13572 414 aa13.63□□□□□ -0.23
CLTC-202ENST00000393043 ZBTB33Q86T24 672 aa13.63□□□□□ -0.23
CLTC-202ENST00000393043 APOL6Q9BWW8 343 aa13.63□□□□□ -0.23
CLTC-202ENST00000393043 ABCB6Q9NP58 842 aa13.63□□□□□ -0.23
CLTC-202ENST00000393043 SPATA31A5Q5VU36 1347 aa13.63□□□□□ -0.23
CLTC-202ENST00000393043 SPATA31A7Q8IWB4 1347 aa13.63□□□□□ -0.23
CLTC-202ENST00000393043 INHBAP08476 426 aa13.63□□□□□ -0.23
CLTC-202ENST00000393043 PCK1P35558 622 aa13.63□□□□□ -0.23
CLTC-202ENST00000393043 EPHA7Q15375 998 aa13.63□□□□□ -0.23
CLTC-202ENST00000393043 SNRNP48Q6IEG0 339 aaKnown RBP13.63□□□□□ -0.23
CLTC-202ENST00000393043 LRRC8CQ8TDW0 803 aa13.63□□□□□ -0.23
CLTC-202ENST00000393043 FMO2Q99518 471 aa13.63□□□□□ -0.23
CLTC-202ENST00000393043 ZHX2Q9Y6X8 837 aa13.63□□□□□ -0.23
CLTC-202ENST00000393043 ARHGEF37A1IGU5 675 aa13.63□□□□□ -0.23
CLTC-202ENST00000393043 PALMO75781 387 aa13.63□□□□□ -0.23
CLTC-202ENST00000393043 CAPN12Q6ZSI9 719 aa13.63□□□□□ -0.23
CLTC-202ENST00000393043 EEPD1Q7L9B9 569 aa13.63□□□□□ -0.23
CLTC-202ENST00000393043 KAZALD1Q96I82 304 aa13.63□□□□□ -0.23
CLTC-202ENST00000393043 WRNIP1Q96S55 665 aa13.63□□□□□ -0.23
CLTC-202ENST00000393043 TUFT1Q9NNX1 390 aa13.63□□□□□ -0.23
CLTC-202ENST00000393043 CAPN11Q9UMQ6 739 aa13.63□□□□□ -0.23
CLTC-202ENST00000393043 SYNGAP1Q96PV0 1343 aa13.62□□□□□ -0.23
CLTC-202ENST00000393043 PODXLO00592 558 aa13.62□□□□□ -0.23
CLTC-202ENST00000393043 ENTPD3O75355 529 aa13.62□□□□□ -0.23
CLTC-202ENST00000393043 EYA4O95677 639 aa13.62□□□□□ -0.23
CLTC-202ENST00000393043 PSMC5P62195 406 aa13.62□□□□□ -0.23
CLTC-202ENST00000393043 CCDC160A6NGH7 325 aa13.62□□□□□ -0.23
CLTC-202ENST00000393043 TBX3O15119 743 aa13.62□□□□□ -0.23
CLTC-202ENST00000393043 SUN1O94901 812 aa13.62□□□□□ -0.23
CLTC-202ENST00000393043 CTDNEP1O95476 244 aa13.62□□□□□ -0.23
CLTC-202ENST00000393043 DPYDQ12882 1025 aa13.62□□□□□ -0.23
CLTC-202ENST00000393043 FRMD5Q7Z6J6 570 aa13.62□□□□□ -0.23
CLTC-202ENST00000393043 CFAP57Q96MR6 1250 aa13.62□□□□□ -0.23
CLTC-202ENST00000393043 C7orf25Q9BPX7 421 aa13.62□□□□□ -0.23
CLTC-202ENST00000393043 EIF2AK1Q9BQI3 630 aaKnown RBP13.62□□□□□ -0.23
CLTC-202ENST00000393043 A0A1B0GTH6 734 aa13.62□□□□□ -0.23
CLTC-202ENST00000393043 MAD1L1Q9Y6D9 718 aa13.62□□□□□ -0.23
CLTC-202ENST00000393043 PNMA6AP0CW24 399 aaPredicted RBP13.62□□□□□ -0.23
CLTC-202ENST00000393043 SRGAP2CP0DJJ0 459 aa13.62□□□□□ -0.23
CLTC-202ENST00000393043 SNX1Q13596 522 aa13.62□□□□□ -0.23
CLTC-202ENST00000393043 PRPSAP1Q14558 356 aa13.62□□□□□ -0.23
CLTC-202ENST00000393043 FAM149B1Q96BN6 582 aa13.62□□□□□ -0.23
CLTC-202ENST00000393043 CAPN7Q9Y6W3 813 aa13.62□□□□□ -0.23
CLTC-202ENST00000393043 GPC5P78333 572 aa13.61□□□□□ -0.23
CLTC-202ENST00000393043 METTL23Q86XA0 190 aa13.61□□□□□ -0.23
CLTC-202ENST00000393043 BEGAINQ9BUH8 593 aa13.61□□□□□ -0.23
CLTC-202ENST00000393043 SEPT10Q9P0V9 454 aa13.61□□□□□ -0.23
CLTC-202ENST00000393043 POC1B-GALNT4F8VUJ3 575 aa13.61□□□□□ -0.23
CLTC-202ENST00000393043 PDXKO00764 312 aa13.61□□□□□ -0.23
CLTC-202ENST00000393043 TPD52P55327 224 aaPredicted RBP13.61□□□□□ -0.23
CLTC-202ENST00000393043 ADSSL1Q8N142 457 aa13.61□□□□□ -0.23
CLTC-202ENST00000393043 LXNQ9BS40 222 aa13.61□□□□□ -0.23
CLTC-202ENST00000393043 ITIH6Q6UXX5 1313 aa13.61□□□□□ -0.23
CLTC-202ENST00000393043 CLDN3O15551 220 aa13.61□□□□□ -0.23
CLTC-202ENST00000393043 SART1O43290 800 aaKnown RBP13.61□□□□□ -0.23
CLTC-202ENST00000393043 RHOBTB3O94955 611 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms