RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 CENPFP49454 3210 aa11.85□□□□□ -0.51
BRF1-204ENST00000392557 LSP1P33241 339 aa11.85□□□□□ -0.51
BRF1-204ENST00000392557 STAT2P52630 851 aa11.85□□□□□ -0.51
BRF1-204ENST00000392557 ADAM9Q13443 819 aa11.85□□□□□ -0.51
BRF1-204ENST00000392557 CENPPQ6IPU0 288 aa11.85□□□□□ -0.51
BRF1-204ENST00000392557 JPH2Q9BR39 696 aaPredicted RBP11.85□□□□□ -0.51
BRF1-204ENST00000392557 GLIS2Q9BZE0 524 aaPredicted RBP11.85□□□□□ -0.51
BRF1-204ENST00000392557 CCDC113Q9H0I3 377 aa11.85□□□□□ -0.51
BRF1-204ENST00000392557 FBXO28Q9NVF7 368 aa11.85□□□□□ -0.51
BRF1-204ENST00000392557 PKD2L1Q9P0L9 805 aa11.85□□□□□ -0.51
BRF1-204ENST00000392557 TSKSQ9UJT2 592 aa11.85□□□□□ -0.51
BRF1-204ENST00000392557 PRR12Q9ULL5 1215 aa11.85□□□□□ -0.51
BRF1-204ENST00000392557 NRXN2Q9P2S2 1712 aa11.85□□□□□ -0.51
BRF1-204ENST00000392557 POTEFA5A3E0 1075 aa11.84□□□□□ -0.51
BRF1-204ENST00000392557 POTEIP0CG38 1075 aa11.84□□□□□ -0.51
BRF1-204ENST00000392557 FXR2P51116 673 aaKnown RBP eCLIP11.84□□□□□ -0.51
BRF1-204ENST00000392557 POTEGQ6S5H5 508 aa11.84□□□□□ -0.51
BRF1-204ENST00000392557 POTEEQ6S8J3 1075 aa11.84□□□□□ -0.51
BRF1-204ENST00000392557 CCDC121Q6ZUS5 278 aa11.84□□□□□ -0.51
BRF1-204ENST00000392557 JDP2Q8WYK2 163 aa11.84□□□□□ -0.51
BRF1-204ENST00000392557 RAD54LQ92698 747 aa11.84□□□□□ -0.51
BRF1-204ENST00000392557 MRIQ9BWK5 157 aa11.84□□□□□ -0.51
BRF1-204ENST00000392557 SIK3Q9Y2K2 1263 aa11.84□□□□□ -0.51
BRF1-204ENST00000392557 GJA3Q9Y6H8 435 aa11.84□□□□□ -0.51
BRF1-204ENST00000392557 ZC3H4Q9UPT8 1303 aaKnown RBP11.84□□□□□ -0.51
BRF1-204ENST00000392557 A0A087X0T9 212 aa11.84□□□□□ -0.51
BRF1-204ENST00000392557 RAD51CO43502 376 aa11.84□□□□□ -0.51
BRF1-204ENST00000392557 SERPING1P05155 500 aa11.84□□□□□ -0.51
BRF1-204ENST00000392557 FAM228BP0C875 321 aa11.84□□□□□ -0.51
BRF1-204ENST00000392557 ACTN1P12814 892 aa11.84□□□□□ -0.51
BRF1-204ENST00000392557 HNRNPH1P31943 449 aaKnown RBP11.84□□□□□ -0.51
BRF1-204ENST00000392557 KIAA1755Q5JYT7 1200 aa11.84□□□□□ -0.51
BRF1-204ENST00000392557 MCTP2Q6DN12 878 aa11.84□□□□□ -0.51
BRF1-204ENST00000392557 GUF1Q8N442 669 aaKnown RBP11.84□□□□□ -0.51
BRF1-204ENST00000392557 KAT2BQ92831 832 aa11.84□□□□□ -0.51
BRF1-204ENST00000392557 MKL1Q969V6 931 aa11.84□□□□□ -0.51
BRF1-204ENST00000392557 DDX47Q9H0S4 455 aaKnown RBP11.84□□□□□ -0.51
BRF1-204ENST00000392557 MEIS2O14770 477 aa11.84□□□□□ -0.51
BRF1-204ENST00000392557 FKBP1AP62942 108 aaKnown RBP11.84□□□□□ -0.51
BRF1-204ENST00000392557 LRRC63Q05C16 580 aa11.84□□□□□ -0.51
BRF1-204ENST00000392557 GPBP1Q86WP2 473 aa11.84□□□□□ -0.51
BRF1-204ENST00000392557 CASKIN2Q8WXE0 1202 aa11.84□□□□□ -0.51
BRF1-204ENST00000392557 IQCDQ96DY2 449 aa11.84□□□□□ -0.51
BRF1-204ENST00000392557 P2RX7Q99572 595 aaKnown RBP11.84□□□□□ -0.51
BRF1-204ENST00000392557 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.84□□□□□ -0.51
BRF1-204ENST00000392557 LOC102724159A0A0B4J2E5 919 aa11.83□□□□□ -0.52
BRF1-204ENST00000392557 KRIT1O00522 736 aa11.83□□□□□ -0.52
BRF1-204ENST00000392557 CXCL9Q07325 125 aa11.83□□□□□ -0.52
BRF1-204ENST00000392557 PABPC4Q13310 644 aaKnown RBP eCLIP11.83□□□□□ -0.52
BRF1-204ENST00000392557 PWP2Q15269 919 aaKnown RBP11.83□□□□□ -0.52
BRF1-204ENST00000392557 FIGNQ5HY92 759 aa11.83□□□□□ -0.52
BRF1-204ENST00000392557 PPP4R3AQ6IN85 833 aa11.83□□□□□ -0.52
BRF1-204ENST00000392557 CPLX4Q7Z7G2 160 aa11.83□□□□□ -0.52
BRF1-204ENST00000392557 CCDC65Q8IXS2 484 aa11.83□□□□□ -0.52
BRF1-204ENST00000392557 CPXCR1Q8N123 301 aa11.83□□□□□ -0.52
BRF1-204ENST00000392557 CABS1Q96KC9 395 aa11.83□□□□□ -0.52
BRF1-204ENST00000392557 SCLT1Q96NL6 688 aa11.83□□□□□ -0.52
BRF1-204ENST00000392557 PURBQ96QR8 312 aaKnown RBP11.83□□□□□ -0.52
BRF1-204ENST00000392557 LRRC27Q9C0I9 530 aa11.83□□□□□ -0.52
BRF1-204ENST00000392557 HOMER2Q9NSB8 354 aa11.83□□□□□ -0.52
BRF1-204ENST00000392557 STK17AQ9UEE5 414 aa11.83□□□□□ -0.52
BRF1-204ENST00000392557 ZBTB21Q9ULJ3 1066 aa11.83□□□□□ -0.52
BRF1-204ENST00000392557 ZNF233A6NK53 670 aa11.83□□□□□ -0.52
BRF1-204ENST00000392557 GUCY2CP25092 1073 aa11.83□□□□□ -0.52
BRF1-204ENST00000392557 CLK2P49760 499 aaKnown RBP11.83□□□□□ -0.52
BRF1-204ENST00000392557 COASYQ13057 564 aa11.83□□□□□ -0.52
BRF1-204ENST00000392557 TMEM132AQ24JP5 1023 aa11.83□□□□□ -0.52
BRF1-204ENST00000392557 KRT71Q3SY84 523 aa11.83□□□□□ -0.52
BRF1-204ENST00000392557 CETN3O15182 167 aa11.83□□□□□ -0.52
BRF1-204ENST00000392557 TMOD1P28289 359 aa11.83□□□□□ -0.52
BRF1-204ENST00000392557 CDK17Q00537 523 aa11.83□□□□□ -0.52
BRF1-204ENST00000392557 DGKZQ13574 1117 aa11.83□□□□□ -0.52
BRF1-204ENST00000392557 PEX26Q7Z412 305 aa11.83□□□□□ -0.52
BRF1-204ENST00000392557 CCDC91Q7Z6B0 441 aa11.83□□□□□ -0.52
BRF1-204ENST00000392557 ZNF526Q8TF50 670 aaPredicted RBP11.83□□□□□ -0.52
BRF1-204ENST00000392557 CCT8L2Q96SF2 557 aa11.83□□□□□ -0.52
BRF1-204ENST00000392557 ZNRF3Q9ULT6 936 aa11.83□□□□□ -0.52
BRF1-204ENST00000392557 SHOX2O60902 331 aaPredicted RBP11.82□□□□□ -0.52
BRF1-204ENST00000392557 PPP1R37O75864 691 aa11.82□□□□□ -0.52
BRF1-204ENST00000392557 GCFC2P16383 781 aaKnown RBP11.82□□□□□ -0.52
BRF1-204ENST00000392557 ABCB4P21439 1286 aa11.82□□□□□ -0.52
BRF1-204ENST00000392557 PDIA5Q14554 519 aa11.82□□□□□ -0.52
BRF1-204ENST00000392557 FOCADQ5VW36 1801 aa11.82□□□□□ -0.52
BRF1-204ENST00000392557 DAAM2Q86T65 1068 aa11.82□□□□□ -0.52
BRF1-204ENST00000392557 TAX1BP1Q86VP1 789 aa11.82□□□□□ -0.52
BRF1-204ENST00000392557 RNF10Q8N5U6 811 aaKnown RBP11.82□□□□□ -0.52
BRF1-204ENST00000392557 UHMK1Q8TAS1 419 aaKnown RBP11.82□□□□□ -0.52
BRF1-204ENST00000392557 FAM151AQ8WW52 585 aa11.82□□□□□ -0.52
BRF1-204ENST00000392557 CEP72Q9P209 647 aa11.82□□□□□ -0.52
BRF1-204ENST00000392557 HERC5Q9UII4 1024 aaKnown RBP11.82□□□□□ -0.52
BRF1-204ENST00000392557 SMCHD1A6NHR9 2005 aa11.82□□□□□ -0.52
BRF1-204ENST00000392557 FAM86B1E9PN63 330 aa11.82□□□□□ -0.52
BRF1-204ENST00000392557 FAM86B2P0C5J1 330 aa11.82□□□□□ -0.52
BRF1-204ENST00000392557 PLA2G4BP0C869 781 aa11.82□□□□□ -0.52
BRF1-204ENST00000392557 PRLRP16471 622 aa11.82□□□□□ -0.52
BRF1-204ENST00000392557 NR2F2P24468 414 aa11.82□□□□□ -0.52
BRF1-204ENST00000392557 ZNF662Q6ZS27 426 aa11.82□□□□□ -0.52
BRF1-204ENST00000392557 VPS36Q86VN1 386 aa11.82□□□□□ -0.52
BRF1-204ENST00000392557 NLRP14Q86W24 1093 aa11.82□□□□□ -0.52
BRF1-204ENST00000392557 ZNF473Q8WTR7 871 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms