RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 DNAJC6O75061 913 aa4.34□□□□□ -1.71
RNU6-550P-201ENST00000391057 VIL1P09327 827 aaKnown RBP4.34□□□□□ -1.71
RNU6-550P-201ENST00000391057 CPEP16870 476 aa4.34□□□□□ -1.71
RNU6-550P-201ENST00000391057 CD40P25942 277 aa4.34□□□□□ -1.71
RNU6-550P-201ENST00000391057 ADCYAP1R1P41586 468 aa4.34□□□□□ -1.71
RNU6-550P-201ENST00000391057 SLC6A3Q01959 620 aa4.34□□□□□ -1.71
RNU6-550P-201ENST00000391057 ROM1Q03395 351 aa4.34□□□□□ -1.71
RNU6-550P-201ENST00000391057 KIAA2012Q0VF49 1180 aa4.34□□□□□ -1.71
RNU6-550P-201ENST00000391057 STRN3Q13033 797 aa4.34□□□□□ -1.71
RNU6-550P-201ENST00000391057 TTC38Q5R3I4 469 aa4.34□□□□□ -1.71
RNU6-550P-201ENST00000391057 PRAMEF9Q5VWM5 478 aa4.34□□□□□ -1.71
RNU6-550P-201ENST00000391057 ESRP1Q6NXG1 681 aaKnown RBP4.34□□□□□ -1.71
RNU6-550P-201ENST00000391057 BORAQ6PGQ7 559 aa4.34□□□□□ -1.71
RNU6-550P-201ENST00000391057 FILIP1Q7Z7B0 1213 aa4.34□□□□□ -1.71
RNU6-550P-201ENST00000391057 FAM124AQ86V42 546 aa4.34□□□□□ -1.71
RNU6-550P-201ENST00000391057 C7orf31Q8N865 590 aa4.34□□□□□ -1.71
RNU6-550P-201ENST00000391057 NUDT10Q8NFP7 164 aa4.34□□□□□ -1.71
RNU6-550P-201ENST00000391057 FEZF2Q8TBJ5 459 aa4.34□□□□□ -1.71
RNU6-550P-201ENST00000391057 FOXRED1Q96CU9 486 aaPredicted RBP4.34□□□□□ -1.71
RNU6-550P-201ENST00000391057 NUDT11Q96G61 164 aa4.34□□□□□ -1.71
RNU6-550P-201ENST00000391057 LCORQ96JN0 433 aaPredicted RBP4.34□□□□□ -1.71
RNU6-550P-201ENST00000391057 C16orf92Q96LL3 132 aa4.34□□□□□ -1.71
RNU6-550P-201ENST00000391057 TUBGCP5Q96RT8 1024 aa4.34□□□□□ -1.71
RNU6-550P-201ENST00000391057 TTC1Q99614 292 aa4.34□□□□□ -1.71
RNU6-550P-201ENST00000391057 IFT22Q9H7X7 185 aa4.34□□□□□ -1.71
RNU6-550P-201ENST00000391057 SPC25Q9HBM1 224 aa4.34□□□□□ -1.71
RNU6-550P-201ENST00000391057 BARX1Q9HBU1 254 aaPredicted RBP4.34□□□□□ -1.71
RNU6-550P-201ENST00000391057 PARD6AQ9NPB6 346 aa4.34□□□□□ -1.71
RNU6-550P-201ENST00000391057 SPTLC3Q9NUV7 552 aa4.34□□□□□ -1.71
RNU6-550P-201ENST00000391057 FBXO10Q9UK96 956 aa4.34□□□□□ -1.71
RNU6-550P-201ENST00000391057 APOBEC2Q9Y235 224 aaKnown RBP4.34□□□□□ -1.71
RNU6-550P-201ENST00000391057 SBNO2Q9Y2G9 1366 aa4.33□□□□□ -1.72
RNU6-550P-201ENST00000391057 TGM5O43548 720 aa4.33□□□□□ -1.72
RNU6-550P-201ENST00000391057 NOBOXO60393 691 aa4.33□□□□□ -1.72
RNU6-550P-201ENST00000391057 CUTAO60888 179 aa4.33□□□□□ -1.72
RNU6-550P-201ENST00000391057 KLHL18O94889 574 aa4.33□□□□□ -1.72
RNU6-550P-201ENST00000391057 PRLP01236 227 aa4.33□□□□□ -1.72
RNU6-550P-201ENST00000391057 INHBBP09529 407 aa4.33□□□□□ -1.72
RNU6-550P-201ENST00000391057 BPIP17213 487 aa4.33□□□□□ -1.72
RNU6-550P-201ENST00000391057 APEX1P27695 318 aaKnown RBP4.33□□□□□ -1.72
RNU6-550P-201ENST00000391057 ADCY8P40145 1251 aa4.33□□□□□ -1.72
RNU6-550P-201ENST00000391057 SMAD3P84022 425 aaKnown RBP4.33□□□□□ -1.72
RNU6-550P-201ENST00000391057 NFATC3Q12968 1075 aa4.33□□□□□ -1.72
RNU6-550P-201ENST00000391057 STILQ15468 1287 aa4.33□□□□□ -1.72
RNU6-550P-201ENST00000391057 ATP13A4Q4VNC1 1196 aa4.33□□□□□ -1.72
RNU6-550P-201ENST00000391057 LCE3BQ5TA77 95 aa4.33□□□□□ -1.72
RNU6-550P-201ENST00000391057 SLFN12LQ6IEE8 588 aa4.33□□□□□ -1.72
RNU6-550P-201ENST00000391057 TIGD7Q6NT04 549 aaPredicted RBP4.33□□□□□ -1.72
RNU6-550P-201ENST00000391057 Q6ZUG5 572 aa4.33□□□□□ -1.72
RNU6-550P-201ENST00000391057 OTOP2Q7RTS6 562 aa4.33□□□□□ -1.72
RNU6-550P-201ENST00000391057 STRA8Q7Z7C7 330 aa4.33□□□□□ -1.72
RNU6-550P-201ENST00000391057 PHYKPLQ8IUZ5 450 aa4.33□□□□□ -1.72
RNU6-550P-201ENST00000391057 REXO1L1PQ8IX06 675 aa4.33□□□□□ -1.72
RNU6-550P-201ENST00000391057 IFNL2Q8IZJ0 200 aa4.33□□□□□ -1.72
RNU6-550P-201ENST00000391057 KLHL36Q8N4N3 616 aa4.33□□□□□ -1.72
RNU6-550P-201ENST00000391057 MAML3Q96JK9 1138 aa4.33□□□□□ -1.72
RNU6-550P-201ENST00000391057 ZMAT4Q9H898 229 aa4.33□□□□□ -1.72
RNU6-550P-201ENST00000391057 EMC7Q9NPA0 242 aa4.33□□□□□ -1.72
RNU6-550P-201ENST00000391057 OTOL1A6NHN0 477 aaPredicted RBP4.32□□□□□ -1.72
RNU6-550P-201ENST00000391057 NEMP1O14524 444 aa4.32□□□□□ -1.72
RNU6-550P-201ENST00000391057 ZEB2O60315 1214 aa4.32□□□□□ -1.72
RNU6-550P-201ENST00000391057 POLD1P28340 1107 aa4.32□□□□□ -1.72
RNU6-550P-201ENST00000391057 LSP1P33241 339 aa4.32□□□□□ -1.72
RNU6-550P-201ENST00000391057 RGS3P49796 1198 aa4.32□□□□□ -1.72
RNU6-550P-201ENST00000391057 PHC1P78364 1004 aa4.32□□□□□ -1.72
RNU6-550P-201ENST00000391057 NFKB2Q00653 900 aa4.32□□□□□ -1.72
RNU6-550P-201ENST00000391057 CD83Q01151 205 aa4.32□□□□□ -1.72
RNU6-550P-201ENST00000391057 MAP3K12Q12852 859 aa4.32□□□□□ -1.72
RNU6-550P-201ENST00000391057 TOP3AQ13472 1001 aaPredicted RBP4.32□□□□□ -1.72
RNU6-550P-201ENST00000391057 LRRC32Q14392 662 aa4.32□□□□□ -1.72
RNU6-550P-201ENST00000391057 DDB1Q16531 1140 aa4.32□□□□□ -1.72
RNU6-550P-201ENST00000391057 GPR158Q5T848 1215 aa4.32□□□□□ -1.72
RNU6-550P-201ENST00000391057 KANK2Q63ZY3 851 aa4.32□□□□□ -1.72
RNU6-550P-201ENST00000391057 RALYLQ86SE5 291 aaKnown RBP4.32□□□□□ -1.72
RNU6-550P-201ENST00000391057 ZDHHC14Q8IZN3 488 aa4.32□□□□□ -1.72
RNU6-550P-201ENST00000391057 AFAP1L2Q8N4X5 818 aa4.32□□□□□ -1.72
RNU6-550P-201ENST00000391057 RTF1Q92541 710 aaKnown RBP4.32□□□□□ -1.72
RNU6-550P-201ENST00000391057 XYLT2Q9H1B5 865 aa4.32□□□□□ -1.72
RNU6-550P-201ENST00000391057 ZDHHC9Q9Y397 364 aa4.32□□□□□ -1.72
RNU6-550P-201ENST00000391057 ADAMTS20P59510 1910 aa4.31□□□□□ -1.72
RNU6-550P-201ENST00000391057 A0A0G2JNJ9 132 aa4.31□□□□□ -1.72
RNU6-550P-201ENST00000391057 BRINP1O60477 761 aa4.31□□□□□ -1.72
RNU6-550P-201ENST00000391057 RAB11FIP3O75154 756 aa4.31□□□□□ -1.72
RNU6-550P-201ENST00000391057 ULK1O75385 1050 aa4.31□□□□□ -1.72
RNU6-550P-201ENST00000391057 MAFO75444 373 aaPredicted RBP4.31□□□□□ -1.72
RNU6-550P-201ENST00000391057 APOL3O95236 402 aa4.31□□□□□ -1.72
RNU6-550P-201ENST00000391057 HMGCRP04035 888 aa4.31□□□□□ -1.72
RNU6-550P-201ENST00000391057 CANXP27824 592 aaKnown RBP4.31□□□□□ -1.72
RNU6-550P-201ENST00000391057 ETV4P43268 484 aa4.31□□□□□ -1.72
RNU6-550P-201ENST00000391057 ID4P47928 161 aa4.31□□□□□ -1.72
RNU6-550P-201ENST00000391057 KCNQ1P51787 676 aa4.31□□□□□ -1.72
RNU6-550P-201ENST00000391057 MOGSQ13724 837 aa4.31□□□□□ -1.72
RNU6-550P-201ENST00000391057 MYBPC3Q14896 1274 aa4.31□□□□□ -1.72
RNU6-550P-201ENST00000391057 TERF2Q15554 542 aa4.31□□□□□ -1.72
RNU6-550P-201ENST00000391057 FBLN7Q53RD9 439 aa4.31□□□□□ -1.72
RNU6-550P-201ENST00000391057 TMEM200BQ69YZ2 307 aa4.31□□□□□ -1.72
RNU6-550P-201ENST00000391057 GRAMD4Q6IC98 578 aa4.31□□□□□ -1.72
RNU6-550P-201ENST00000391057 ZNF662Q6ZS27 426 aa4.31□□□□□ -1.72
RNU6-550P-201ENST00000391057 HDGFL2Q7Z4V5 671 aaPredicted RBP4.31□□□□□ -1.72
RNU6-550P-201ENST00000391057 FRMD5Q7Z6J6 570 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms