RNA–Protein interactions for RNA: ENST00000390528.1

TRAJ9-201, Transcript of T cell receptor alpha joining 9, humanhuman

APPRIS P1 BASIC

Gene TRAJ9, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ9-201ENST00000390528 TFIP11Q9UBB9 837 aaKnown RBP0.23□□□□□ -2.37
TRAJ9-201ENST00000390528 SFMBT1Q9UHJ3 866 aa0.23□□□□□ -2.37
TRAJ9-201ENST00000390528 ZFP69BQ9UJL9 534 aa0.23□□□□□ -2.37
TRAJ9-201ENST00000390528 MUC5ACP98088 5654 aa0.23□□□□□ -2.37
TRAJ9-201ENST00000390528 MUC16Q8WXI7 14507 aa0.23□□□□□ -2.37
TRAJ9-201ENST00000390528 SNED1Q8TER0 1413 aa0.22□□□□□ -2.37
TRAJ9-201ENST00000390528 ACIN1Q9UKV3 1341 aaKnown RBP0.22□□□□□ -2.37
TRAJ9-201ENST00000390528 A0A1W2PRX2 142 aa0.22□□□□□ -2.37
TRAJ9-201ENST00000390528 MFAP3LO75121 409 aa0.22□□□□□ -2.37
TRAJ9-201ENST00000390528 KRT5P13647 590 aa0.22□□□□□ -2.37
TRAJ9-201ENST00000390528 GM2AP17900 193 aa0.22□□□□□ -2.37
TRAJ9-201ENST00000390528 GPD1P21695 349 aa0.22□□□□□ -2.37
TRAJ9-201ENST00000390528 LTBRP36941 435 aa0.22□□□□□ -2.37
TRAJ9-201ENST00000390528 ETV4P43268 484 aa0.22□□□□□ -2.37
TRAJ9-201ENST00000390528 GLRBP48167 497 aa0.22□□□□□ -2.37
TRAJ9-201ENST00000390528 LIG3P49916 1009 aa0.22□□□□□ -2.37
TRAJ9-201ENST00000390528 HNRNPKP61978 463 aaKnown RBP eCLIP0.22□□□□□ -2.37
TRAJ9-201ENST00000390528 RAD51AP2Q09MP3 1159 aa0.22□□□□□ -2.37
TRAJ9-201ENST00000390528 RIN1Q13671 783 aa0.22□□□□□ -2.37
TRAJ9-201ENST00000390528 LRRC41Q15345 812 aa0.22□□□□□ -2.37
TRAJ9-201ENST00000390528 TWIST1Q15672 202 aa0.22□□□□□ -2.37
TRAJ9-201ENST00000390528 ASIC2Q16515 512 aa0.22□□□□□ -2.37
TRAJ9-201ENST00000390528 HDGFL1Q5TGJ6 251 aa0.22□□□□□ -2.37
TRAJ9-201ENST00000390528 NAIF1Q69YI7 327 aaPredicted RBP0.22□□□□□ -2.37
TRAJ9-201ENST00000390528 SUSD1Q6UWL2 747 aa0.22□□□□□ -2.37
TRAJ9-201ENST00000390528 SLC44A3Q8N4M1 653 aa0.22□□□□□ -2.37
TRAJ9-201ENST00000390528 PLEKHO2Q8TD55 490 aa0.22□□□□□ -2.37
TRAJ9-201ENST00000390528 ARMC5Q96C12 935 aa0.22□□□□□ -2.37
TRAJ9-201ENST00000390528 RHOVQ96L33 236 aa0.22□□□□□ -2.37
TRAJ9-201ENST00000390528 HEPHQ9BQS7 1158 aa0.22□□□□□ -2.37
TRAJ9-201ENST00000390528 FBXL21Q9UKT6 434 aa0.22□□□□□ -2.37
TRAJ9-201ENST00000390528 PCDHB12Q9Y5F1 795 aa0.22□□□□□ -2.37
TRAJ9-201ENST00000390528 ESYT3A0FGR9 886 aa0.21□□□□□ -2.38
TRAJ9-201ENST00000390528 ARID3CA6NKF2 412 aa0.21□□□□□ -2.38
TRAJ9-201ENST00000390528 CHURC1-FNTBB4DL54 471 aa0.21□□□□□ -2.38
TRAJ9-201ENST00000390528 RGS13O14921 159 aa0.21□□□□□ -2.38
TRAJ9-201ENST00000390528 SLC28A2O43868 658 aa0.21□□□□□ -2.38
TRAJ9-201ENST00000390528 EPHB2P29323 1055 aa0.21□□□□□ -2.38
TRAJ9-201ENST00000390528 BMPR1AP36894 532 aa0.21□□□□□ -2.38
TRAJ9-201ENST00000390528 CDKN2AP42771 156 aaKnown RBP0.21□□□□□ -2.38
TRAJ9-201ENST00000390528 CSRP3P50461 194 aa0.21□□□□□ -2.38
TRAJ9-201ENST00000390528 TRA2BP62995 288 aaKnown RBP0.21□□□□□ -2.38
TRAJ9-201ENST00000390528 IRF9Q00978 393 aa0.21□□□□□ -2.38
TRAJ9-201ENST00000390528 CFHR1Q03591 330 aa0.21□□□□□ -2.38
TRAJ9-201ENST00000390528 DDB1Q16531 1140 aa0.21□□□□□ -2.38
TRAJ9-201ENST00000390528 FCRLBQ6BAA4 426 aa0.21□□□□□ -2.38
TRAJ9-201ENST00000390528 YTHDF3Q7Z739 585 aaKnown RBP0.21□□□□□ -2.38
TRAJ9-201ENST00000390528 ZNF485Q8NCK3 441 aa0.21□□□□□ -2.38
TRAJ9-201ENST00000390528 FCRL3Q96P31 734 aaPredicted RBP0.21□□□□□ -2.38
TRAJ9-201ENST00000390528 SH2D3AQ9BRG2 576 aa0.21□□□□□ -2.38
TRAJ9-201ENST00000390528 DCTN5Q9BTE1 182 aa0.21□□□□□ -2.38
TRAJ9-201ENST00000390528 OR10A2Q9H208 303 aa0.21□□□□□ -2.38
TRAJ9-201ENST00000390528 TTF2Q9UNY4 1162 aaKnown RBP0.21□□□□□ -2.38
TRAJ9-201ENST00000390528 ZNF652Q9Y2D9 606 aa0.21□□□□□ -2.38
TRAJ9-201ENST00000390528 AFG3L2Q9Y4W6 797 aa0.21□□□□□ -2.38
TRAJ9-201ENST00000390528 RNASET2O00584 256 aaKnown RBP0.2□□□□□ -2.38
TRAJ9-201ENST00000390528 MAN2B1O00754 1011 aa0.2□□□□□ -2.38
TRAJ9-201ENST00000390528 NPHS1O60500 1241 aa0.2□□□□□ -2.38
TRAJ9-201ENST00000390528 ZNF432O94892 652 aa0.2□□□□□ -2.38
TRAJ9-201ENST00000390528 NDUFA10O95299 355 aa0.2□□□□□ -2.38
TRAJ9-201ENST00000390528 UMODP07911 640 aa0.2□□□□□ -2.38
TRAJ9-201ENST00000390528 EGR2P11161 476 aaPredicted RBP0.2□□□□□ -2.38
TRAJ9-201ENST00000390528 CERS1P27544 350 aa0.2□□□□□ -2.38
TRAJ9-201ENST00000390528 HGFACQ04756 655 aa0.2□□□□□ -2.38
TRAJ9-201ENST00000390528 SKIDA1Q1XH10 827 aa0.2□□□□□ -2.38
TRAJ9-201ENST00000390528 C1QL3Q5VWW1 255 aa0.2□□□□□ -2.38
TRAJ9-201ENST00000390528 CAPRIN2Q6IMN6 1127 aaKnown RBP0.2□□□□□ -2.38
TRAJ9-201ENST00000390528 LVRNQ6Q4G3 990 aa0.2□□□□□ -2.38
TRAJ9-201ENST00000390528 TMEM192Q8IY95 271 aa0.2□□□□□ -2.38
TRAJ9-201ENST00000390528 LYG1Q8N1E2 194 aa0.2□□□□□ -2.38
TRAJ9-201ENST00000390528 ARRDC4Q8NCT1 418 aa0.2□□□□□ -2.38
TRAJ9-201ENST00000390528 OR14K1Q8NGZ2 314 aa0.2□□□□□ -2.38
TRAJ9-201ENST00000390528 SARAFQ96BY9 339 aa0.2□□□□□ -2.38
TRAJ9-201ENST00000390528 VCPIP1Q96JH7 1222 aa0.2□□□□□ -2.38
TRAJ9-201ENST00000390528 PDLIM2Q96JY6 352 aa0.2□□□□□ -2.38
TRAJ9-201ENST00000390528 TIMP4Q99727 224 aa0.2□□□□□ -2.38
TRAJ9-201ENST00000390528 BCO2Q9BYV7 579 aa0.2□□□□□ -2.38
TRAJ9-201ENST00000390528 IL17RBQ9NRM6 502 aa0.2□□□□□ -2.38
TRAJ9-201ENST00000390528 LRIT1Q9P2V4 623 aa0.2□□□□□ -2.38
TRAJ9-201ENST00000390528 DKK2Q9UBU2 259 aa0.2□□□□□ -2.38
TRAJ9-201ENST00000390528 SEPT3Q9UH03 358 aa0.2□□□□□ -2.38
TRAJ9-201ENST00000390528 KLHL3Q9UH77 587 aa0.2□□□□□ -2.38
TRAJ9-201ENST00000390528 AOX1Q06278 1338 aa0.19□□□□□ -2.38
TRAJ9-201ENST00000390528 IGKV6D-21A0A0A0MT36 114 aa0.19□□□□□ -2.38
TRAJ9-201ENST00000390528 GAGE12BA1L429 117 aa0.19□□□□□ -2.38
TRAJ9-201ENST00000390528 GAGE12HA6NDE8 117 aa0.19□□□□□ -2.38
TRAJ9-201ENST00000390528 LINC01548A6NM66 108 aa0.19□□□□□ -2.38
TRAJ9-201ENST00000390528 LACTBL1A8MY62 500 aa0.19□□□□□ -2.38
TRAJ9-201ENST00000390528 AHRRA9YTQ3 701 aa0.19□□□□□ -2.38
TRAJ9-201ENST00000390528 FZD6O60353 706 aa0.19□□□□□ -2.38
TRAJ9-201ENST00000390528 IPO13O94829 963 aaKnown RBP0.19□□□□□ -2.38
TRAJ9-201ENST00000390528 UBOX5O94941 541 aa0.19□□□□□ -2.38
TRAJ9-201ENST00000390528 HMGCRP04035 888 aa0.19□□□□□ -2.38
TRAJ9-201ENST00000390528 COMPP49747 757 aaPredicted RBP0.19□□□□□ -2.38
TRAJ9-201ENST00000390528 ORC1Q13415 861 aa0.19□□□□□ -2.38
TRAJ9-201ENST00000390528 MCM6Q14566 821 aa0.19□□□□□ -2.38
TRAJ9-201ENST00000390528 XKR4Q5GH76 650 aa0.19□□□□□ -2.38
TRAJ9-201ENST00000390528 CFAP70Q5T0N1 1121 aa0.19□□□□□ -2.38
TRAJ9-201ENST00000390528 ZDHHC20Q5W0Z9 365 aa0.19□□□□□ -2.38
TRAJ9-201ENST00000390528 EEF1DP3Q658K8 133 aa0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms