RNA–Protein interactions for RNA: ENST00000390426.2

TRAV4-201, Transcript of T cell receptor alpha variable 4, humanhuman

APPRIS P1 BASIC

Gene TRAV4, Length 395 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4-201ENST00000390426 ZBTB42B2RXF5 422 aa12.14□□□□□ -0.47
TRAV4-201ENST00000390426 STAG3L1P0CL83 205 aa12.14□□□□□ -0.47
TRAV4-201ENST00000390426 PDIA3P30101 505 aaKnown RBP12.14□□□□□ -0.47
TRAV4-201ENST00000390426 GATMP50440 423 aa12.14□□□□□ -0.47
TRAV4-201ENST00000390426 ZNF746Q6NUN9 644 aaPredicted RBP12.14□□□□□ -0.47
TRAV4-201ENST00000390426 FAM178BQ8IXR5 827 aa12.14□□□□□ -0.47
TRAV4-201ENST00000390426 CMTR2Q8IYT2 770 aaKnown RBP12.14□□□□□ -0.47
TRAV4-201ENST00000390426 CRIPAKQ8N1N5 446 aa12.14□□□□□ -0.47
TRAV4-201ENST00000390426 FBXL16Q8N461 479 aa12.14□□□□□ -0.47
TRAV4-201ENST00000390426 PABPC5Q96DU9 382 aaKnown RBP12.14□□□□□ -0.47
TRAV4-201ENST00000390426 AGXT2Q9BYV1 514 aa12.14□□□□□ -0.47
TRAV4-201ENST00000390426 LMAN2LQ9H0V9 348 aa12.14□□□□□ -0.47
TRAV4-201ENST00000390426 ERVK-5Q9HDB9 667 aa12.14□□□□□ -0.47
TRAV4-201ENST00000390426 ALG13Q9NP73 1137 aaKnown RBP12.14□□□□□ -0.47
TRAV4-201ENST00000390426 CLDND1Q9NY35 253 aa12.14□□□□□ -0.47
TRAV4-201ENST00000390426 VPS54Q9P1Q0 977 aa12.14□□□□□ -0.47
TRAV4-201ENST00000390426 GABBR1Q9UBS5 961 aa12.14□□□□□ -0.47
TRAV4-201ENST00000390426 TCEAL9Q9UHQ7 104 aa12.14□□□□□ -0.47
TRAV4-201ENST00000390426 LRFN2Q9ULH4 789 aa12.14□□□□□ -0.47
TRAV4-201ENST00000390426 COL1A2P08123 1366 aa12.14□□□□□ -0.47
TRAV4-201ENST00000390426 NID2Q14112 1375 aa12.14□□□□□ -0.47
TRAV4-201ENST00000390426 TTC3P53804 2025 aa12.13□□□□□ -0.47
TRAV4-201ENST00000390426 GRXCR2A6NFK2 248 aa12.13□□□□□ -0.47
TRAV4-201ENST00000390426 EDIL3O43854 480 aa12.13□□□□□ -0.47
TRAV4-201ENST00000390426 MGEA5O60502 916 aa12.13□□□□□ -0.47
TRAV4-201ENST00000390426 RPS6KA5O75582 802 aa12.13□□□□□ -0.47
TRAV4-201ENST00000390426 REC8O95072 547 aa12.13□□□□□ -0.47
TRAV4-201ENST00000390426 PSAPP07602 524 aa12.13□□□□□ -0.47
TRAV4-201ENST00000390426 IFNAR1P17181 557 aa12.13□□□□□ -0.47
TRAV4-201ENST00000390426 CIITAP33076 1130 aa12.13□□□□□ -0.47
TRAV4-201ENST00000390426 SETQ01105 290 aaPredicted RBP12.13□□□□□ -0.47
TRAV4-201ENST00000390426 HYAL1Q12794 435 aa12.13□□□□□ -0.47
TRAV4-201ENST00000390426 KIZQ2M2Z5 673 aa12.13□□□□□ -0.47
TRAV4-201ENST00000390426 GJD3Q8N144 294 aa12.13□□□□□ -0.47
TRAV4-201ENST00000390426 BICD2Q8TD16 824 aa12.13□□□□□ -0.47
TRAV4-201ENST00000390426 TMEM40Q8WWA1 233 aa12.13□□□□□ -0.47
TRAV4-201ENST00000390426 BBXQ8WY36 941 aaPredicted RBP12.13□□□□□ -0.47
TRAV4-201ENST00000390426 LARP6Q9BRS8 491 aaKnown RBP12.13□□□□□ -0.47
TRAV4-201ENST00000390426 RNF26Q9BY78 433 aaPredicted RBP12.13□□□□□ -0.47
TRAV4-201ENST00000390426 IGFLR1Q9H665 355 aa12.13□□□□□ -0.47
TRAV4-201ENST00000390426 PLAGL2Q9UPG8 496 aa12.13□□□□□ -0.47
TRAV4-201ENST00000390426 SAMM50Q9Y512 469 aa12.13□□□□□ -0.47
TRAV4-201ENST00000390426 PCDHA10Q9Y5I2 948 aa12.13□□□□□ -0.47
TRAV4-201ENST00000390426 MAFBQ9Y5Q3 323 aaPredicted RBP12.13□□□□□ -0.47
TRAV4-201ENST00000390426 REV3LO60673 3130 aa12.13□□□□□ -0.47
TRAV4-201ENST00000390426 C22orf31O95567 290 aa12.12□□□□□ -0.47
TRAV4-201ENST00000390426 VTNP04004 478 aa12.12□□□□□ -0.47
TRAV4-201ENST00000390426 ITGB1P05556 798 aa12.12□□□□□ -0.47
TRAV4-201ENST00000390426 SSTR3P32745 418 aaPredicted RBP12.12□□□□□ -0.47
TRAV4-201ENST00000390426 GTF2F1P35269 517 aaKnown RBP eCLIP12.12□□□□□ -0.47
TRAV4-201ENST00000390426 SARSP49591 514 aaKnown RBP12.12□□□□□ -0.47
TRAV4-201ENST00000390426 NLRP5P59047 1200 aa12.12□□□□□ -0.47
TRAV4-201ENST00000390426 TOB2Q14106 344 aaPredicted RBP12.12□□□□□ -0.47
TRAV4-201ENST00000390426 COL19A1Q14993 1142 aa12.12□□□□□ -0.47
TRAV4-201ENST00000390426 CLUL1Q15846 466 aa12.12□□□□□ -0.47
TRAV4-201ENST00000390426 PUS10Q3MIT2 529 aaKnown RBP12.12□□□□□ -0.47
TRAV4-201ENST00000390426 METTL13Q8N6R0 699 aa12.12□□□□□ -0.47
TRAV4-201ENST00000390426 KLHL23Q8NBE8 558 aa12.12□□□□□ -0.47
TRAV4-201ENST00000390426 CCDC148Q8NFR7 591 aa12.12□□□□□ -0.47
TRAV4-201ENST00000390426 LENG9Q96B70 501 aa12.12□□□□□ -0.47
TRAV4-201ENST00000390426 OSMRQ99650 979 aa12.12□□□□□ -0.47
TRAV4-201ENST00000390426 ADAM2Q99965 735 aa12.12□□□□□ -0.47
TRAV4-201ENST00000390426 LRFN3Q9BTN0 628 aa12.12□□□□□ -0.47
TRAV4-201ENST00000390426 PLVAPQ9BX97 442 aa12.12□□□□□ -0.47
TRAV4-201ENST00000390426 ST3GAL5Q9UNP4 418 aa12.12□□□□□ -0.47
TRAV4-201ENST00000390426 PCDHB7Q9Y5E2 793 aa12.12□□□□□ -0.47
TRAV4-201ENST00000390426 NLRC5Q86WI3 1866 aa12.12□□□□□ -0.47
TRAV4-201ENST00000390426 DENND3A2RUS2 1198 aa12.11□□□□□ -0.47
TRAV4-201ENST00000390426 FAM86C2PA6NEL3 165 aa12.11□□□□□ -0.47
TRAV4-201ENST00000390426 WDR64B1ANS9 1081 aa12.11□□□□□ -0.47
TRAV4-201ENST00000390426 GPR182O15218 404 aa12.11□□□□□ -0.47
TRAV4-201ENST00000390426 MSH4O15457 936 aa12.11□□□□□ -0.47
TRAV4-201ENST00000390426 NCK2O43639 380 aa12.11□□□□□ -0.47
TRAV4-201ENST00000390426 MMP1P03956 469 aa12.11□□□□□ -0.47
TRAV4-201ENST00000390426 DNAJB1P25685 340 aa12.11□□□□□ -0.47
TRAV4-201ENST00000390426 LTBRP36941 435 aa12.11□□□□□ -0.47
TRAV4-201ENST00000390426 CLCN3P51790 818 aa12.11□□□□□ -0.47
TRAV4-201ENST00000390426 CRYBB1P53674 252 aaPredicted RBP12.11□□□□□ -0.47
TRAV4-201ENST00000390426 EVCP57679 992 aa12.11□□□□□ -0.47
TRAV4-201ENST00000390426 SSRP1Q08945 709 aaKnown RBP12.11□□□□□ -0.47
TRAV4-201ENST00000390426 CAMK1Q14012 370 aa12.11□□□□□ -0.47
TRAV4-201ENST00000390426 TMEM31Q5JXX7 168 aa12.11□□□□□ -0.47
TRAV4-201ENST00000390426 ODR4Q5SWX8 454 aa12.11□□□□□ -0.47
TRAV4-201ENST00000390426 SPOUT1Q5T280 376 aaKnown RBP12.11□□□□□ -0.47
TRAV4-201ENST00000390426 RUFY3Q7L099 469 aa12.11□□□□□ -0.47
TRAV4-201ENST00000390426 FAM228AQ86W67 206 aa12.11□□□□□ -0.47
TRAV4-201ENST00000390426 SMAP1Q8IYB5 467 aaPredicted RBP12.11□□□□□ -0.47
TRAV4-201ENST00000390426 SPPL3Q8TCT6 385 aa12.11□□□□□ -0.47
TRAV4-201ENST00000390426 P2RX5Q93086 422 aa12.11□□□□□ -0.47
TRAV4-201ENST00000390426 GJA10Q969M2 543 aa12.11□□□□□ -0.47
TRAV4-201ENST00000390426 ZNF668Q96K58 619 aaPredicted RBP12.11□□□□□ -0.47
TRAV4-201ENST00000390426 ZSWIM6Q9HCJ5 1215 aa12.11□□□□□ -0.47
TRAV4-201ENST00000390426 DISC1Q9NRI5 854 aa12.11□□□□□ -0.47
TRAV4-201ENST00000390426 RGS18Q9NS28 235 aa12.11□□□□□ -0.47
TRAV4-201ENST00000390426 RALGAPA2Q2PPJ7 1873 aa12.1□□□□□ -0.47
TRAV4-201ENST00000390426 TBKBP1A7MCY6 615 aa12.1□□□□□ -0.47
TRAV4-201ENST00000390426 C9IYK1 514 aa12.1□□□□□ -0.47
TRAV4-201ENST00000390426 PI4K2BG5E9Z4 385 aa12.1□□□□□ -0.47
TRAV4-201ENST00000390426 LINC01565O15544 149 aa12.1□□□□□ -0.47
TRAV4-201ENST00000390426 CHMP2AO43633 222 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms