RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 HSD17B3P37058 310 aa19.32■□□□□ 0.68
SQSTM1-202ENST00000389805 DACT2Q5SW24 774 aa19.32■□□□□ 0.68
SQSTM1-202ENST00000389805 PPP1R18Q6NYC8 613 aa19.32■□□□□ 0.68
SQSTM1-202ENST00000389805 CCDC17Q96LX7 622 aa19.32■□□□□ 0.68
SQSTM1-202ENST00000389805 PI4KBQ9UBF8 816 aa19.32■□□□□ 0.68
SQSTM1-202ENST00000389805 CTNNA1P35221 906 aaKnown RBP19.31■□□□□ 0.68
SQSTM1-202ENST00000389805 IKQ13123 557 aaPredicted RBP19.31■□□□□ 0.68
SQSTM1-202ENST00000389805 LRRC55Q6ZSA7 311 aa19.31■□□□□ 0.68
SQSTM1-202ENST00000389805 CD302Q8IX05 232 aa19.31■□□□□ 0.68
SQSTM1-202ENST00000389805 SPICE1Q8N0Z3 855 aa19.31■□□□□ 0.68
SQSTM1-202ENST00000389805 PANK4Q9NVE7 773 aa19.31■□□□□ 0.68
SQSTM1-202ENST00000389805 NOVA2Q9UNW9 492 aaKnown RBP19.31■□□□□ 0.68
SQSTM1-202ENST00000389805 SIK3Q9Y2K2 1263 aa19.31■□□□□ 0.68
SQSTM1-202ENST00000389805 BRWD3Q6RI45 1802 aa19.31■□□□□ 0.68
SQSTM1-202ENST00000389805 MYO3BQ8WXR4 1341 aa19.31■□□□□ 0.68
SQSTM1-202ENST00000389805 F5H6K3 240 aa19.31■□□□□ 0.68
SQSTM1-202ENST00000389805 MEIS2O14770 477 aa19.31■□□□□ 0.68
SQSTM1-202ENST00000389805 CDK17Q00537 523 aa19.31■□□□□ 0.68
SQSTM1-202ENST00000389805 KLRC3Q07444 240 aa19.31■□□□□ 0.68
SQSTM1-202ENST00000389805 CPLX4Q7Z7G2 160 aa19.31■□□□□ 0.68
SQSTM1-202ENST00000389805 CACNA2D3Q8IZS8 1091 aa19.31■□□□□ 0.68
SQSTM1-202ENST00000389805 ANO3Q9BYT9 981 aa19.31■□□□□ 0.68
SQSTM1-202ENST00000389805 TRAPPC3O43617 180 aa19.3■□□□□ 0.68
SQSTM1-202ENST00000389805 ARID5AQ03989 594 aa19.3■□□□□ 0.68
SQSTM1-202ENST00000389805 ICA1Q05084 483 aa19.3■□□□□ 0.68
SQSTM1-202ENST00000389805 AOC3Q16853 763 aa19.3■□□□□ 0.68
SQSTM1-202ENST00000389805 COBLL1Q53SF7 1204 aa19.3■□□□□ 0.68
SQSTM1-202ENST00000389805 HIBCHQ6NVY1 386 aaPredicted RBP19.3■□□□□ 0.68
SQSTM1-202ENST00000389805 UBLCP1Q8WVY7 318 aaPredicted RBP19.3■□□□□ 0.68
SQSTM1-202ENST00000389805 RAPGEF5Q92565 580 aa19.3■□□□□ 0.68
SQSTM1-202ENST00000389805 ZHX3Q9H4I2 956 aa19.3■□□□□ 0.68
SQSTM1-202ENST00000389805 CDC25CP30307 473 aa19.3■□□□□ 0.68
SQSTM1-202ENST00000389805 BYSLQ13895 437 aaKnown RBP19.3■□□□□ 0.68
SQSTM1-202ENST00000389805 RRP1BQ14684 758 aaKnown RBP19.3■□□□□ 0.68
SQSTM1-202ENST00000389805 PRR16Q569H4 304 aa19.3■□□□□ 0.68
SQSTM1-202ENST00000389805 HVCN1Q96D96 273 aa19.3■□□□□ 0.68
SQSTM1-202ENST00000389805 THOC1Q96FV9 657 aaKnown RBP19.3■□□□□ 0.68
SQSTM1-202ENST00000389805 TRIM6Q9C030 488 aaPredicted RBP19.3■□□□□ 0.68
SQSTM1-202ENST00000389805 TANGO6Q9C0B7 1094 aa19.3■□□□□ 0.68
SQSTM1-202ENST00000389805 GOLPH3Q9H4A6 298 aa19.3■□□□□ 0.68
SQSTM1-202ENST00000389805 MEIS1O00470 390 aa19.29■□□□□ 0.68
SQSTM1-202ENST00000389805 MED24O75448 989 aa19.29■□□□□ 0.68
SQSTM1-202ENST00000389805 PPP1R2P41236 205 aa19.29■□□□□ 0.68
SQSTM1-202ENST00000389805 DRP2Q13474 957 aa19.29■□□□□ 0.68
SQSTM1-202ENST00000389805 PPP1R7Q15435 360 aa19.29■□□□□ 0.68
SQSTM1-202ENST00000389805 EMC10Q5UCC4 262 aa19.29■□□□□ 0.68
SQSTM1-202ENST00000389805 SLC30A10Q6XR72 485 aa19.29■□□□□ 0.68
SQSTM1-202ENST00000389805 CACNA2D4Q7Z3S7 1137 aa19.29■□□□□ 0.68
SQSTM1-202ENST00000389805 MREGQ8N565 214 aa19.29■□□□□ 0.68
SQSTM1-202ENST00000389805 ARFGAP2Q8N6H7 521 aa19.29■□□□□ 0.68
SQSTM1-202ENST00000389805 MDM1Q8TC05 714 aa19.29■□□□□ 0.68
SQSTM1-202ENST00000389805 WHAMMQ8TF30 809 aa19.29■□□□□ 0.68
SQSTM1-202ENST00000389805 A0A1B0GUA9 196 aa19.29■□□□□ 0.68
SQSTM1-202ENST00000389805 POTEFA5A3E0 1075 aa19.29■□□□□ 0.68
SQSTM1-202ENST00000389805 TRAF5O00463 557 aa19.29■□□□□ 0.68
SQSTM1-202ENST00000389805 POTEIP0CG38 1075 aa19.29■□□□□ 0.68
SQSTM1-202ENST00000389805 HOXA13P31271 388 aaPredicted RBP19.29■□□□□ 0.68
SQSTM1-202ENST00000389805 PSMC6P62333 389 aa19.29■□□□□ 0.68
SQSTM1-202ENST00000389805 ERVK-9P63128 1117 aa19.29■□□□□ 0.68
SQSTM1-202ENST00000389805 UAP1Q16222 522 aaPredicted RBP19.29■□□□□ 0.68
SQSTM1-202ENST00000389805 POTEGQ6S5H5 508 aa19.29■□□□□ 0.68
SQSTM1-202ENST00000389805 POTEEQ6S8J3 1075 aa19.29■□□□□ 0.68
SQSTM1-202ENST00000389805 MYOCDQ8IZQ8 938 aa19.29■□□□□ 0.68
SQSTM1-202ENST00000389805 LRRC4CQ9HCJ2 640 aa19.29■□□□□ 0.68
SQSTM1-202ENST00000389805 SLC12A6Q9UHW9 1150 aa19.29■□□□□ 0.68
SQSTM1-202ENST00000389805 A0A1W2PQJ5 194 aa19.29■□□□□ 0.68
SQSTM1-202ENST00000389805 PLA2G4BP0C869 781 aa19.29■□□□□ 0.68
SQSTM1-202ENST00000389805 FLT3P36888 993 aa19.29■□□□□ 0.68
SQSTM1-202ENST00000389805 CRYMQ14894 314 aa19.29■□□□□ 0.68
SQSTM1-202ENST00000389805 MAN2A1Q16706 1144 aa19.29■□□□□ 0.68
SQSTM1-202ENST00000389805 STRIP1Q5VSL9 837 aa19.29■□□□□ 0.68
SQSTM1-202ENST00000389805 MKL1Q969V6 931 aa19.29■□□□□ 0.68
SQSTM1-202ENST00000389805 SCN9AQ15858 1988 aa19.28■□□□□ 0.68
SQSTM1-202ENST00000389805 ZNF844Q08AG5 666 aa19.28■□□□□ 0.68
SQSTM1-202ENST00000389805 FAM26FQ5R3K3 315 aa19.28■□□□□ 0.68
SQSTM1-202ENST00000389805 CYP2W1Q8TAV3 490 aa19.28■□□□□ 0.68
SQSTM1-202ENST00000389805 TCP11Q8WWU5 503 aa19.28■□□□□ 0.68
SQSTM1-202ENST00000389805 PRMT6Q96LA8 375 aaPredicted RBP19.28■□□□□ 0.68
SQSTM1-202ENST00000389805 DHX36Q9H2U1 1008 aaKnown RBP19.28■□□□□ 0.68
SQSTM1-202ENST00000389805 NYAP2Q9P242 653 aa19.28■□□□□ 0.68
SQSTM1-202ENST00000389805 PPP1R12AO14974 1030 aaPredicted RBP19.28■□□□□ 0.68
SQSTM1-202ENST00000389805 NDUFB10O96000 172 aa19.28■□□□□ 0.68
SQSTM1-202ENST00000389805 GH2P01242 217 aa19.28■□□□□ 0.68
SQSTM1-202ENST00000389805 KLRC1P26715 233 aa19.28■□□□□ 0.68
SQSTM1-202ENST00000389805 HERC4Q5GLZ8 1057 aaPredicted RBP19.28■□□□□ 0.68
SQSTM1-202ENST00000389805 GPBP1Q86WP2 473 aa19.28■□□□□ 0.68
SQSTM1-202ENST00000389805 DNAAF5Q86Y56 855 aa19.28■□□□□ 0.68
SQSTM1-202ENST00000389805 STAMBPL1Q96FJ0 436 aa19.28■□□□□ 0.68
SQSTM1-202ENST00000389805 NEUROG2Q9H2A3 272 aa19.28■□□□□ 0.68
SQSTM1-202ENST00000389805 BCAS3Q9H6U6 928 aa19.28■□□□□ 0.68
SQSTM1-202ENST00000389805 GGA2Q9UJY4 613 aa19.28■□□□□ 0.68
SQSTM1-202ENST00000389805 HSPA9P38646 679 aaKnown RBP19.27■□□□□ 0.68
SQSTM1-202ENST00000389805 MAGOHP61326 146 aaKnown RBP19.27■□□□□ 0.68
SQSTM1-202ENST00000389805 MYO1EQ12965 1108 aa19.27■□□□□ 0.68
SQSTM1-202ENST00000389805 ABCB5Q2M3G0 1257 aa19.27■□□□□ 0.68
SQSTM1-202ENST00000389805 MAGOHBQ96A72 148 aaKnown RBP19.27■□□□□ 0.68
SQSTM1-202ENST00000389805 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.27■□□□□ 0.688e-12■■□□□ 13.9
SQSTM1-202ENST00000389805 AP1M1Q9BXS5 423 aa19.27■□□□□ 0.68
SQSTM1-202ENST00000389805 KCNMB3Q9NPA1 279 aa19.27■□□□□ 0.68
SQSTM1-202ENST00000389805 TMCO5BA8MYB1 307 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms