RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 CA4P22748 312 aa15.39■□□□□ 0.05
RTF1-201ENST00000389629 CRYMQ14894 314 aa15.39■□□□□ 0.05
RTF1-201ENST00000389629 SLC18A3Q16572 532 aa15.39■□□□□ 0.05
RTF1-201ENST00000389629 TRPM8Q7Z2W7 1104 aa15.39■□□□□ 0.05
RTF1-201ENST00000389629 RAPGEF5Q92565 580 aa15.39■□□□□ 0.05
RTF1-201ENST00000389629 FAM84BQ96KN1 310 aaPredicted RBP15.39■□□□□ 0.05
RTF1-201ENST00000389629 CYTH2Q99418 400 aa15.39■□□□□ 0.05
RTF1-201ENST00000389629 ZNF148Q9UQR1 794 aa15.39■□□□□ 0.05
RTF1-201ENST00000389629 SPATA31A3Q5VYP0 1347 aa15.39■□□□□ 0.05
RTF1-201ENST00000389629 A0A1W2PQJ5 194 aa15.39■□□□□ 0.05
RTF1-201ENST00000389629 FAM153BP0C7A2 387 aa15.39■□□□□ 0.05
RTF1-201ENST00000389629 BRAFP15056 766 aa15.39■□□□□ 0.05
RTF1-201ENST00000389629 RANBP1P43487 201 aa15.39■□□□□ 0.05
RTF1-201ENST00000389629 FAM153CQ494X1 144 aa15.39■□□□□ 0.05
RTF1-201ENST00000389629 NUDCD1Q96RS6 583 aa15.39■□□□□ 0.05
RTF1-201ENST00000389629 BATF3Q9NR55 127 aa15.39■□□□□ 0.05
RTF1-201ENST00000389629 FAM153AQ9UHL3 310 aa15.39■□□□□ 0.05
RTF1-201ENST00000389629 AGLP35573 1532 aa15.39■□□□□ 0.05
RTF1-201ENST00000389629 PSMC2P35998 433 aaKnown RBP15.39■□□□□ 0.05
RTF1-201ENST00000389629 MYL7Q01449 175 aa15.39■□□□□ 0.05
RTF1-201ENST00000389629 PSMD6Q15008 389 aa15.39■□□□□ 0.05
RTF1-201ENST00000389629 FBXO41Q8TF61 875 aa15.39■□□□□ 0.05
RTF1-201ENST00000389629 USP40Q9NVE5 1235 aa15.39■□□□□ 0.05
RTF1-201ENST00000389629 DBR1Q9UK59 544 aaKnown RBP15.39■□□□□ 0.05
RTF1-201ENST00000389629 SEMA3FQ13275 785 aa15.38■□□□□ 0.05
RTF1-201ENST00000389629 SEC23AQ15436 765 aa15.38■□□□□ 0.05
RTF1-201ENST00000389629 LONP2Q86WA8 852 aa15.38■□□□□ 0.05
RTF1-201ENST00000389629 ZKSCAN4Q969J2 545 aaPredicted RBP15.38■□□□□ 0.05
RTF1-201ENST00000389629 CCDC127Q96BQ5 260 aa15.38■□□□□ 0.05
RTF1-201ENST00000389629 GPR101Q96P66 508 aaPredicted RBP15.38■□□□□ 0.05
RTF1-201ENST00000389629 ARHGAP20Q9P2F6 1191 aa15.38■□□□□ 0.05
RTF1-201ENST00000389629 TCRBV5S4A2TA0A5A2 114 aa15.38■□□□□ 0.05
RTF1-201ENST00000389629 POTEB3A0JP26 581 aa15.38■□□□□ 0.05
RTF1-201ENST00000389629 POTECB2RU33 542 aa15.38■□□□□ 0.05
RTF1-201ENST00000389629 RNF225M0QZC1 329 aaPredicted RBP15.38■□□□□ 0.05
RTF1-201ENST00000389629 POTEBQ6S5H4 581 aa15.38■□□□□ 0.05
RTF1-201ENST00000389629 TGS1Q96RS0 853 aaKnown RBP15.38■□□□□ 0.05
RTF1-201ENST00000389629 TCHPQ9BT92 498 aa15.38■□□□□ 0.05
RTF1-201ENST00000389629 MAPK13O15264 365 aa15.38■□□□□ 0.05
RTF1-201ENST00000389629 GAS7O60861 476 aa15.38■□□□□ 0.05
RTF1-201ENST00000389629 ANP32DO95626 131 aa15.38■□□□□ 0.05
RTF1-201ENST00000389629 SP4Q02446 784 aa15.38■□□□□ 0.05
RTF1-201ENST00000389629 BYSLQ13895 437 aaKnown RBP15.38■□□□□ 0.05
RTF1-201ENST00000389629 ODR4Q5SWX8 454 aa15.38■□□□□ 0.05
RTF1-201ENST00000389629 PALM2Q8IXS6 379 aa15.38■□□□□ 0.05
RTF1-201ENST00000389629 EDEM3Q9BZQ6 932 aa15.38■□□□□ 0.05
RTF1-201ENST00000389629 ACTN1P12814 892 aa15.38■□□□□ 0.05
RTF1-201ENST00000389629 LIN9Q5TKA1 542 aa15.38■□□□□ 0.05
RTF1-201ENST00000389629 ABTB1Q969K4 478 aaPredicted RBP15.38■□□□□ 0.05
RTF1-201ENST00000389629 STK24Q9Y6E0 443 aa15.38■□□□□ 0.05
RTF1-201ENST00000389629 MYBL1P10243 752 aa15.37■□□□□ 0.05
RTF1-201ENST00000389629 BRD2P25440 801 aaKnown RBP15.37■□□□□ 0.05
RTF1-201ENST00000389629 SH3RF1Q7Z6J0 888 aa15.37■□□□□ 0.05
RTF1-201ENST00000389629 CCDC110Q8TBZ0 833 aa15.37■□□□□ 0.05
RTF1-201ENST00000389629 GRK7Q8WTQ7 553 aa15.37■□□□□ 0.05
RTF1-201ENST00000389629 MAIP1Q8WWC4 291 aa15.37■□□□□ 0.05
RTF1-201ENST00000389629 VCX3AQ9NNX9 186 aa15.37■□□□□ 0.05
RTF1-201ENST00000389629 EXOC1LA0A1B0GW35 172 aa15.37■□□□□ 0.05
RTF1-201ENST00000389629 HARSP12081 509 aaKnown RBP15.37■□□□□ 0.05
RTF1-201ENST00000389629 ZYXQ15942 572 aaKnown RBP15.37■□□□□ 0.05
RTF1-201ENST00000389629 TMED8Q6PL24 325 aaPredicted RBP15.37■□□□□ 0.05
RTF1-201ENST00000389629 SLC30A9Q6PML9 568 aa15.37■□□□□ 0.05
RTF1-201ENST00000389629 LRIG3Q6UXM1 1119 aa15.37■□□□□ 0.05
RTF1-201ENST00000389629 NSUN4Q96CB9 384 aaKnown RBP15.37■□□□□ 0.05
RTF1-201ENST00000389629 ZNF653Q96CK0 615 aa15.37■□□□□ 0.05
RTF1-201ENST00000389629 DYDC2Q96IM9 177 aa15.37■□□□□ 0.05
RTF1-201ENST00000389629 IMPG2Q9BZV3 1241 aa15.37■□□□□ 0.05
RTF1-201ENST00000389629 LARSQ9P2J5 1176 aaKnown RBP15.37■□□□□ 0.05
RTF1-201ENST00000389629 IGF2BP3O00425 579 aaKnown RBP eCLIP15.37■□□□□ 0.05
RTF1-201ENST00000389629 TBC1D10BQ4KMP7 808 aaPredicted RBP15.37■□□□□ 0.05
RTF1-201ENST00000389629 DCUN1D2Q6PH85 259 aa15.37■□□□□ 0.05
RTF1-201ENST00000389629 BHMT2Q9H2M3 363 aa15.37■□□□□ 0.05
RTF1-201ENST00000389629 MAP3K7O43318 606 aa15.37■□□□□ 0.05
RTF1-201ENST00000389629 CDC25CP30307 473 aa15.37■□□□□ 0.05
RTF1-201ENST00000389629 SFR1Q86XK3 245 aa15.37■□□□□ 0.05
RTF1-201ENST00000389629 CNPY4Q8N129 248 aa15.37■□□□□ 0.05
RTF1-201ENST00000389629 USP38Q8NB14 1042 aa15.37■□□□□ 0.05
RTF1-201ENST00000389629 FGFR1OP2Q9NVK5 253 aa15.37■□□□□ 0.05
RTF1-201ENST00000389629 DDX20Q9UHI6 824 aaKnown RBP15.37■□□□□ 0.05
RTF1-201ENST00000389629 RASSF10A6NK89 507 aa15.36■□□□□ 0.05
RTF1-201ENST00000389629 K7ENM7 598 aa15.36■□□□□ 0.05
RTF1-201ENST00000389629 COPB2P35606 906 aa15.36■□□□□ 0.05
RTF1-201ENST00000389629 SCNN1DP51172 638 aa15.36■□□□□ 0.05
RTF1-201ENST00000389629 TTMPQ5BVD1 217 aa15.36■□□□□ 0.05
RTF1-201ENST00000389629 WDR44Q5JSH3 913 aa15.36■□□□□ 0.05
RTF1-201ENST00000389629 RFX8Q6ZV50 586 aa15.36■□□□□ 0.05
RTF1-201ENST00000389629 AENQ8WTP8 325 aaKnown RBP15.36■□□□□ 0.05
RTF1-201ENST00000389629 DDX27Q96GQ7 796 aaKnown RBP15.36■□□□□ 0.05
RTF1-201ENST00000389629 LRRC37BQ96QE4 947 aa15.36■□□□□ 0.05
RTF1-201ENST00000389629 L3MBTL1Q9Y468 752 aa15.36■□□□□ 0.05
RTF1-201ENST00000389629 A0A0G2JND7 137 aa15.36■□□□□ 0.05
RTF1-201ENST00000389629 LRRC10BA6NIK2 292 aa15.36■□□□□ 0.05
RTF1-201ENST00000389629 RASA4BC9J798 803 aa15.36■□□□□ 0.05
RTF1-201ENST00000389629 RASA4O43374 803 aa15.36■□□□□ 0.05
RTF1-201ENST00000389629 SERPINB6P35237 376 aa15.36■□□□□ 0.05
RTF1-201ENST00000389629 TRAPPC3LQ5T215 181 aa15.36■□□□□ 0.05
RTF1-201ENST00000389629 CEP95Q96GE4 821 aa15.36■□□□□ 0.05
RTF1-201ENST00000389629 SPZ1Q9BXG8 430 aa15.36■□□□□ 0.05
RTF1-201ENST00000389629 TMOD4Q9NZQ9 345 aa15.36■□□□□ 0.05
RTF1-201ENST00000389629 DCTN4Q9UJW0 460 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms