RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 DYDC2Q96IM9 177 aa14.03□□□□□ -0.16
PTPRN2-203ENST00000389418 CALR3Q96L12 384 aaKnown RBP14.03□□□□□ -0.16
PTPRN2-203ENST00000389418 SEPT10Q9P0V9 454 aa14.03□□□□□ -0.16
PTPRN2-203ENST00000389418 GCNT4Q9P109 453 aa14.03□□□□□ -0.16
PTPRN2-203ENST00000389418 LCMT1Q9UIC8 334 aa14.03□□□□□ -0.16
PTPRN2-203ENST00000389418 USP32Q8NFA0 1604 aa14.03□□□□□ -0.16
PTPRN2-203ENST00000389418 GABPB1Q06547 395 aaPredicted RBP14.03□□□□□ -0.16
PTPRN2-203ENST00000389418 ELMSAN1Q6PJG2 1045 aa14.03□□□□□ -0.16
PTPRN2-203ENST00000389418 C4orf50Q6ZRC1 276 aa14.03□□□□□ -0.16
PTPRN2-203ENST00000389418 LPAR1Q92633 364 aa14.03□□□□□ -0.16
PTPRN2-203ENST00000389418 RABGGTAQ92696 567 aa14.03□□□□□ -0.16
PTPRN2-203ENST00000389418 SPZ1Q9BXG8 430 aa14.03□□□□□ -0.16
PTPRN2-203ENST00000389418 JRKLQ9Y4A0 524 aa14.03□□□□□ -0.16
PTPRN2-203ENST00000389418 CTNNA1P35221 906 aaKnown RBP14.03□□□□□ -0.16
PTPRN2-203ENST00000389418 TCP11X2Q5H9J9 407 aa14.03□□□□□ -0.16
PTPRN2-203ENST00000389418 PPFIBP2Q8ND30 876 aa14.03□□□□□ -0.16
PTPRN2-203ENST00000389418 ACAD9Q9H845 621 aa14.03□□□□□ -0.16
PTPRN2-203ENST00000389418 TOPORSQ9NS56 1045 aaPredicted RBP14.03□□□□□ -0.16
PTPRN2-203ENST00000389418 ZNF70Q9UC06 446 aaPredicted RBP14.03□□□□□ -0.16
PTPRN2-203ENST00000389418 ZNF148Q9UQR1 794 aa14.03□□□□□ -0.16
PTPRN2-203ENST00000389418 SLC16A4O15374 487 aa14.03□□□□□ -0.16
PTPRN2-203ENST00000389418 SERPING1P05155 500 aa14.03□□□□□ -0.16
PTPRN2-203ENST00000389418 EIF4A3P38919 411 aaKnown RBP14.03□□□□□ -0.16
PTPRN2-203ENST00000389418 SFR1Q86XK3 245 aa14.03□□□□□ -0.16
PTPRN2-203ENST00000389418 PRMT6Q96LA8 375 aaPredicted RBP14.03□□□□□ -0.16
PTPRN2-203ENST00000389418 GABBR1Q9UBS5 961 aa14.03□□□□□ -0.16
PTPRN2-203ENST00000389418 MKRN1Q9UHC7 482 aaKnown RBP14.03□□□□□ -0.16
PTPRN2-203ENST00000389418 IPO11Q9UI26 975 aaKnown RBP14.03□□□□□ -0.16
PTPRN2-203ENST00000389418 SH3BP5O60239 455 aa14.02□□□□□ -0.16
PTPRN2-203ENST00000389418 P4HBP07237 508 aaKnown RBP14.02□□□□□ -0.16
PTPRN2-203ENST00000389418 CEP85LQ5SZL2 805 aa14.02□□□□□ -0.16
PTPRN2-203ENST00000389418 CEP57Q86XR8 500 aa14.02□□□□□ -0.16
PTPRN2-203ENST00000389418 CTAGE3PQ8IX95 158 aa14.02□□□□□ -0.16
PTPRN2-203ENST00000389418 PANX2Q96RD6 677 aa14.02□□□□□ -0.16
PTPRN2-203ENST00000389418 NDUFA10O95299 355 aa14.02□□□□□ -0.16
PTPRN2-203ENST00000389418 ATF2P15336 505 aa14.02□□□□□ -0.16
PTPRN2-203ENST00000389418 HOXD10P28358 340 aa14.02□□□□□ -0.16
PTPRN2-203ENST00000389418 MAPK4P31152 587 aa14.02□□□□□ -0.16
PTPRN2-203ENST00000389418 MRPS25P82663 173 aaKnown RBP14.02□□□□□ -0.16
PTPRN2-203ENST00000389418 PRPSAP1Q14558 356 aa14.02□□□□□ -0.16
PTPRN2-203ENST00000389418 TTLL4Q14679 1199 aa14.02□□□□□ -0.16
PTPRN2-203ENST00000389418 STYK1Q6J9G0 422 aa14.02□□□□□ -0.16
PTPRN2-203ENST00000389418 SARM1Q6SZW1 724 aa14.02□□□□□ -0.16
PTPRN2-203ENST00000389418 SMAP1Q8IYB5 467 aaPredicted RBP14.02□□□□□ -0.16
PTPRN2-203ENST00000389418 CDKL2Q92772 493 aa14.02□□□□□ -0.16
PTPRN2-203ENST00000389418 C2orf40Q9H1Z8 148 aa14.02□□□□□ -0.16
PTPRN2-203ENST00000389418 POLIQ9UNA4 740 aa14.02□□□□□ -0.16
PTPRN2-203ENST00000389418 FZD1Q9UP38 647 aa14.02□□□□□ -0.16
PTPRN2-203ENST00000389418 RNF40O75150 1001 aa14.02□□□□□ -0.17
PTPRN2-203ENST00000389418 GUCY2DQ02846 1103 aa14.02□□□□□ -0.17
PTPRN2-203ENST00000389418 MAP7Q14244 749 aa14.02□□□□□ -0.17
PTPRN2-203ENST00000389418 MAPK6Q16659 721 aa14.02□□□□□ -0.17
PTPRN2-203ENST00000389418 SHC4Q6S5L8 630 aa14.02□□□□□ -0.17
PTPRN2-203ENST00000389418 CCHCR1Q8TD31 782 aa14.02□□□□□ -0.17
PTPRN2-203ENST00000389418 MSTO1Q9BUK6 570 aa14.02□□□□□ -0.17
PTPRN2-203ENST00000389418 UBE2TQ9NPD8 197 aaPredicted RBP14.02□□□□□ -0.17
PTPRN2-203ENST00000389418 IPO5O00410 1097 aaKnown RBP14.02□□□□□ -0.17
PTPRN2-203ENST00000389418 ITKQ08881 620 aa14.02□□□□□ -0.17
PTPRN2-203ENST00000389418 BAATQ14032 418 aaPredicted RBP14.02□□□□□ -0.17
PTPRN2-203ENST00000389418 NME8Q8N427 588 aa14.02□□□□□ -0.17
PTPRN2-203ENST00000389418 TTC39CQ8N584 583 aa14.02□□□□□ -0.17
PTPRN2-203ENST00000389418 MTMR4Q9NYA4 1195 aa14.02□□□□□ -0.17
PTPRN2-203ENST00000389418 DONSONQ9NYP3 566 aa14.02□□□□□ -0.17
PTPRN2-203ENST00000389418 SLC26A4O43511 780 aa14.01□□□□□ -0.17
PTPRN2-203ENST00000389418 ZMYND10O75800 440 aa14.01□□□□□ -0.17
PTPRN2-203ENST00000389418 PHKA2P46019 1235 aa14.01□□□□□ -0.17
PTPRN2-203ENST00000389418 MUM1L1Q5H9M0 696 aa14.01□□□□□ -0.17
PTPRN2-203ENST00000389418 STMN2Q93045 179 aa14.01□□□□□ -0.17
PTPRN2-203ENST00000389418 LRRC4Q9HBW1 653 aa14.01□□□□□ -0.17
PTPRN2-203ENST00000389418 SLC4A1P02730 911 aa14.01□□□□□ -0.17
PTPRN2-203ENST00000389418 QARSP47897 775 aaKnown RBP14.01□□□□□ -0.17
PTPRN2-203ENST00000389418 TAF1CQ15572 869 aaPredicted RBP14.01□□□□□ -0.17
PTPRN2-203ENST00000389418 FAM114A2Q9NRY5 505 aa14.01□□□□□ -0.17
PTPRN2-203ENST00000389418 C19orf81C9J6K1 198 aa14.01□□□□□ -0.17
PTPRN2-203ENST00000389418 BNIP3LO60238 219 aa14.01□□□□□ -0.17
PTPRN2-203ENST00000389418 SRGAP2BP0DMP2 458 aa14.01□□□□□ -0.17
PTPRN2-203ENST00000389418 CYP2B6P20813 491 aa14.01□□□□□ -0.17
PTPRN2-203ENST00000389418 HUNKP57058 714 aa14.01□□□□□ -0.17
PTPRN2-203ENST00000389418 DNAJC24Q6P3W2 148 aa14.01□□□□□ -0.17
PTPRN2-203ENST00000389418 CCDC62Q6P9F0 684 aa14.01□□□□□ -0.17
PTPRN2-203ENST00000389418 RSBN1LQ6PCB5 846 aaPredicted RBP14.01□□□□□ -0.17
PTPRN2-203ENST00000389418 PBKQ96KB5 322 aa14.01□□□□□ -0.17
PTPRN2-203ENST00000389418 CABS1Q96KC9 395 aa14.01□□□□□ -0.17
PTPRN2-203ENST00000389418 ADAMTS1Q9UHI8 967 aa14.01□□□□□ -0.17
PTPRN2-203ENST00000389418 ASB14A6NK59 587 aa14□□□□□ -0.17
PTPRN2-203ENST00000389418 TNPO2O14787 897 aaKnown RBP14□□□□□ -0.17
PTPRN2-203ENST00000389418 PRR29P0C7W0 189 aa14□□□□□ -0.17
PTPRN2-203ENST00000389418 MMP14P50281 582 aa14□□□□□ -0.17
PTPRN2-203ENST00000389418 ZNF157P51786 506 aaPredicted RBP14□□□□□ -0.17
PTPRN2-203ENST00000389418 DYNLT1P63172 113 aa14□□□□□ -0.17
PTPRN2-203ENST00000389418 RHPN2Q8IUC4 686 aa14□□□□□ -0.17
PTPRN2-203ENST00000389418 MICAL1Q8TDZ2 1067 aa14□□□□□ -0.17
PTPRN2-203ENST00000389418 NHEJ1Q9H9Q4 299 aaPredicted RBP14□□□□□ -0.17
PTPRN2-203ENST00000389418 NYAP2Q9P242 653 aa14□□□□□ -0.17
PTPRN2-203ENST00000389418 PRCPP42785 496 aa14□□□□□ -0.17
PTPRN2-203ENST00000389418 TKFCQ3LXA3 575 aa14□□□□□ -0.17
PTPRN2-203ENST00000389418 LMBRD2Q68DH5 695 aaPredicted RBP14□□□□□ -0.17
PTPRN2-203ENST00000389418 XXYLT1Q8NBI6 393 aa14□□□□□ -0.17
PTPRN2-203ENST00000389418 IGDCC4Q8TDY8 1250 aa14□□□□□ -0.17
PTPRN2-203ENST00000389418 PSPC1Q8WXF1 523 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms