RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 BRDTQ58F21 947 aaPredicted RBP17.41■□□□□ 0.38
PTPRN2-201ENST00000389413 ABCD1P33897 745 aa17.41■□□□□ 0.38
PTPRN2-201ENST00000389413 GPC5P78333 572 aa17.41■□□□□ 0.38
PTPRN2-201ENST00000389413 KRT81Q14533 505 aa17.41■□□□□ 0.38
PTPRN2-201ENST00000389413 PODNQ7Z5L7 613 aa17.41■□□□□ 0.38
PTPRN2-201ENST00000389413 PPP1R12CQ9BZL4 782 aa17.41■□□□□ 0.38
PTPRN2-201ENST00000389413 DRAP1Q14919 205 aaPredicted RBP17.4■□□□□ 0.38
PTPRN2-201ENST00000389413 ZKSCAN8Q15776 578 aaPredicted RBP17.4■□□□□ 0.38
PTPRN2-201ENST00000389413 XXYLT1Q8NBI6 393 aa17.4■□□□□ 0.38
PTPRN2-201ENST00000389413 DYDC2Q96IM9 177 aa17.4■□□□□ 0.38
PTPRN2-201ENST00000389413 CALR3Q96L12 384 aaKnown RBP17.4■□□□□ 0.38
PTPRN2-201ENST00000389413 TRIM6Q9C030 488 aaPredicted RBP17.4■□□□□ 0.38
PTPRN2-201ENST00000389413 EFCC1Q9HA90 598 aa17.4■□□□□ 0.38
PTPRN2-201ENST00000389413 CD2APQ9Y5K6 639 aa17.4■□□□□ 0.38
PTPRN2-201ENST00000389413 FLT1P17948 1338 aa17.4■□□□□ 0.38
PTPRN2-201ENST00000389413 CCDC160A6NGH7 325 aa17.4■□□□□ 0.38
PTPRN2-201ENST00000389413 PDXKO00764 312 aa17.4■□□□□ 0.38
PTPRN2-201ENST00000389413 ZNF543Q08ER8 600 aa17.4■□□□□ 0.38
PTPRN2-201ENST00000389413 NFIXQ14938 502 aa17.4■□□□□ 0.38
PTPRN2-201ENST00000389413 SEC23AQ15436 765 aa17.4■□□□□ 0.38
PTPRN2-201ENST00000389413 MAP7D1Q3KQU3 841 aa17.4■□□□□ 0.38
PTPRN2-201ENST00000389413 CCDC38Q502W7 563 aa17.4■□□□□ 0.38
PTPRN2-201ENST00000389413 TCP11Q8WWU5 503 aa17.4■□□□□ 0.38
PTPRN2-201ENST00000389413 ATP2A3Q93084 1043 aa17.4■□□□□ 0.38
PTPRN2-201ENST00000389413 MIS12Q9H081 205 aa17.4■□□□□ 0.38
PTPRN2-201ENST00000389413 PEX3P56589 373 aa17.4■□□□□ 0.38
PTPRN2-201ENST00000389413 ERGIC2Q96RQ1 377 aa17.4■□□□□ 0.38
PTPRN2-201ENST00000389413 PSMD1Q99460 953 aa17.4■□□□□ 0.38
PTPRN2-201ENST00000389413 SCYL2Q6P3W7 929 aa17.4■□□□□ 0.38
PTPRN2-201ENST00000389413 METTL13Q8N6R0 699 aa17.4■□□□□ 0.38
PTPRN2-201ENST00000389413 MASTLQ96GX5 879 aa17.4■□□□□ 0.38
PTPRN2-201ENST00000389413 ATP6V1G3Q96LB4 118 aa17.4■□□□□ 0.38
PTPRN2-201ENST00000389413 RILPQ96NA2 401 aa17.4■□□□□ 0.38
PTPRN2-201ENST00000389413 SLITRK6Q9H5Y7 841 aa17.4■□□□□ 0.38
PTPRN2-201ENST00000389413 SGK1O00141 431 aa17.39■□□□□ 0.38
PTPRN2-201ENST00000389413 ZNF18P17022 549 aa17.39■□□□□ 0.38
PTPRN2-201ENST00000389413 PLA2G4AP47712 749 aa17.39■□□□□ 0.38
PTPRN2-201ENST00000389413 ERVK-24P63145 666 aa17.39■□□□□ 0.38
PTPRN2-201ENST00000389413 CDHR1Q96JP9 859 aa17.39■□□□□ 0.38
PTPRN2-201ENST00000389413 FHOD1Q9Y613 1164 aa17.39■□□□□ 0.38
PTPRN2-201ENST00000389413 PADI6Q6TGC4 694 aa17.39■□□□□ 0.37
PTPRN2-201ENST00000389413 C16orf86Q6ZW13 317 aa17.39■□□□□ 0.37
PTPRN2-201ENST00000389413 NOC2LQ9Y3T9 749 aaKnown RBP17.39■□□□□ 0.37
PTPRN2-201ENST00000389413 GCLMP48507 274 aa17.39■□□□□ 0.37
PTPRN2-201ENST00000389413 TTBK2Q6IQ55 1244 aa17.39■□□□□ 0.37
PTPRN2-201ENST00000389413 RIOK1Q9BRS2 568 aaKnown RBP17.39■□□□□ 0.37
PTPRN2-201ENST00000389413 PSD3Q9NYI0 1048 aa17.39■□□□□ 0.37
PTPRN2-201ENST00000389413 SUGT1Q9Y2Z0 365 aa17.39■□□□□ 0.37
PTPRN2-201ENST00000389413 EIF2AK2P19525 551 aaKnown RBP17.39■□□□□ 0.37
PTPRN2-201ENST00000389413 SMARCA1P28370 1054 aa17.39■□□□□ 0.37
PTPRN2-201ENST00000389413 SARNPP82979 210 aaKnown RBP17.39■□□□□ 0.37
PTPRN2-201ENST00000389413 ADCY1Q08828 1119 aa17.39■□□□□ 0.37
PTPRN2-201ENST00000389413 CCHCR1Q8TD31 782 aa17.39■□□□□ 0.37
PTPRN2-201ENST00000389413 TBC1D31Q96DN5 1066 aa17.39■□□□□ 0.37
PTPRN2-201ENST00000389413 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.39■□□□□ 0.37
PTPRN2-201ENST00000389413 TCRBV5S4A2TA0A5A2 114 aa17.38■□□□□ 0.37
PTPRN2-201ENST00000389413 TRIP13Q15645 432 aaPredicted RBP17.38■□□□□ 0.37
PTPRN2-201ENST00000389413 CDKAL1Q5VV42 579 aa17.38■□□□□ 0.37
PTPRN2-201ENST00000389413 TAB3Q8N5C8 712 aaPredicted RBP17.38■□□□□ 0.37
PTPRN2-201ENST00000389413 DAGLBQ8NCG7 672 aa17.38■□□□□ 0.37
PTPRN2-201ENST00000389413 HAUS1Q96CS2 278 aa17.38■□□□□ 0.37
PTPRN2-201ENST00000389413 KLHL29Q96CT2 875 aa17.38■□□□□ 0.37
PTPRN2-201ENST00000389413 CFAP57Q96MR6 1250 aa17.38■□□□□ 0.37
PTPRN2-201ENST00000389413 ITPK1Q13572 414 aa17.38■□□□□ 0.37
PTPRN2-201ENST00000389413 GLYCTKQ8IVS8 523 aa17.38■□□□□ 0.37
PTPRN2-201ENST00000389413 HPCAL4Q9UM19 191 aa17.38■□□□□ 0.37
PTPRN2-201ENST00000389413 ANKRD26Q9UPS8 1709 aa17.38■□□□□ 0.37
PTPRN2-201ENST00000389413 MAGOHP61326 146 aaKnown RBP17.38■□□□□ 0.37
PTPRN2-201ENST00000389413 FAM160B1Q5W0V3 765 aa17.38■□□□□ 0.37
PTPRN2-201ENST00000389413 RFFLQ8WZ73 363 aa17.38■□□□□ 0.37
PTPRN2-201ENST00000389413 EIF2AK1Q9BQI3 630 aaKnown RBP17.38■□□□□ 0.37
PTPRN2-201ENST00000389413 FUT8Q9BYC5 575 aa17.38■□□□□ 0.37
PTPRN2-201ENST00000389413 TBK1Q9UHD2 729 aa17.38■□□□□ 0.37
PTPRN2-201ENST00000389413 KLK7P49862 253 aa17.38■□□□□ 0.37
PTPRN2-201ENST00000389413 MIGA2Q7L4E1 593 aa17.38■□□□□ 0.37
PTPRN2-201ENST00000389413 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.38■□□□□ 0.37
PTPRN2-201ENST00000389413 INTS2Q9H0H0 1204 aaKnown RBP17.38■□□□□ 0.37
PTPRN2-201ENST00000389413 QTRT2Q9H974 415 aaKnown RBP17.38■□□□□ 0.37
PTPRN2-201ENST00000389413 DAGLAQ9Y4D2 1042 aa17.38■□□□□ 0.37
PTPRN2-201ENST00000389413 GMNCA6NCL1 334 aa17.37■□□□□ 0.37
PTPRN2-201ENST00000389413 ZNF233A6NK53 670 aa17.37■□□□□ 0.37
PTPRN2-201ENST00000389413 YARSP54577 528 aaKnown RBP17.37■□□□□ 0.37
PTPRN2-201ENST00000389413 PPP2R2AP63151 447 aa17.37■□□□□ 0.37
PTPRN2-201ENST00000389413 TMED2Q15363 201 aa17.37■□□□□ 0.37
PTPRN2-201ENST00000389413 RC3H1Q5TC82 1133 aaKnown RBP17.37■□□□□ 0.37
PTPRN2-201ENST00000389413 MMS22LQ6ZRQ5 1243 aa17.37■□□□□ 0.37
PTPRN2-201ENST00000389413 SDCCAG8Q86SQ7 713 aaPredicted RBP17.37■□□□□ 0.37
PTPRN2-201ENST00000389413 SPATA24Q86W54 205 aa17.37■□□□□ 0.37
PTPRN2-201ENST00000389413 VCXQ9H320 206 aa17.37■□□□□ 0.37
PTPRN2-201ENST00000389413 IVNS1ABPQ9Y6Y0 642 aa17.37■□□□□ 0.37
PTPRN2-201ENST00000389413 RAD17O75943 681 aa17.37■□□□□ 0.37
PTPRN2-201ENST00000389413 ACSL3O95573 720 aa17.37■□□□□ 0.37
PTPRN2-201ENST00000389413 EYA4O95677 639 aa17.37■□□□□ 0.37
PTPRN2-201ENST00000389413 KRT1P04264 644 aa17.37■□□□□ 0.37
PTPRN2-201ENST00000389413 MMEP08473 750 aa17.37■□□□□ 0.37
PTPRN2-201ENST00000389413 PDHBP11177 359 aa17.37■□□□□ 0.37
PTPRN2-201ENST00000389413 MIS18BP1Q6P0N0 1132 aa17.37■□□□□ 0.37
PTPRN2-201ENST00000389413 RPUSD2Q8IZ73 545 aaKnown RBP17.37■□□□□ 0.37
PTPRN2-201ENST00000389413 BANK1Q8NDB2 785 aa17.37■□□□□ 0.37
PTPRN2-201ENST00000389413 MYCBPQ99417 103 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms