RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 SMC1AQ14683 1233 aaKnown RBP6.49□□□□□ -1.37
ERCC4-202ENST00000389138 CWF19L2Q2TBE0 894 aaKnown RBP6.49□□□□□ -1.37
ERCC4-202ENST00000389138 IQSEC1Q6DN90 963 aa6.49□□□□□ -1.37
ERCC4-202ENST00000389138 TTBK2Q6IQ55 1244 aa6.49□□□□□ -1.37
ERCC4-202ENST00000389138 FOXR1Q6PIV2 292 aa6.49□□□□□ -1.37
ERCC4-202ENST00000389138 VHLLQ6RSH7 139 aa6.49□□□□□ -1.37
ERCC4-202ENST00000389138 FAM47EQ6ZV65 393 aa6.49□□□□□ -1.37
ERCC4-202ENST00000389138 BRAPQ7Z569 592 aa6.49□□□□□ -1.37
ERCC4-202ENST00000389138 HEATR4Q86WZ0 1026 aa6.49□□□□□ -1.37
ERCC4-202ENST00000389138 ESX1Q8N693 406 aa6.49□□□□□ -1.37
ERCC4-202ENST00000389138 ASB12Q8WXK4 309 aa6.49□□□□□ -1.37
ERCC4-202ENST00000389138 JAKMIP2Q96AA8 810 aa6.49□□□□□ -1.37
ERCC4-202ENST00000389138 SCLYQ96I15 445 aa6.49□□□□□ -1.37
ERCC4-202ENST00000389138 FAXDC2Q96IV6 333 aa6.49□□□□□ -1.37
ERCC4-202ENST00000389138 ASB2Q96Q27 587 aa6.49□□□□□ -1.37
ERCC4-202ENST00000389138 NMRK2Q9NPI5 230 aa6.49□□□□□ -1.37
ERCC4-202ENST00000389138 DISC1Q9NRI5 854 aa6.49□□□□□ -1.37
ERCC4-202ENST00000389138 HERC5Q9UII4 1024 aaKnown RBP6.49□□□□□ -1.37
ERCC4-202ENST00000389138 PARP3Q9Y6F1 533 aa6.49□□□□□ -1.37
ERCC4-202ENST00000389138 SLIT3O75094 1523 aa6.49□□□□□ -1.37
ERCC4-202ENST00000389138 PNPLA7Q6ZV29 1317 aa6.49□□□□□ -1.37
ERCC4-202ENST00000389138 TRBV23-1A0A0A0MS06 115 aa6.49□□□□□ -1.37
ERCC4-202ENST00000389138 EIF3FO00303 357 aaPredicted RBP6.49□□□□□ -1.37
ERCC4-202ENST00000389138 HTATSF1O43719 755 aaKnown RBP6.49□□□□□ -1.37
ERCC4-202ENST00000389138 PQBP1O60828 265 aaKnown RBP6.49□□□□□ -1.37
ERCC4-202ENST00000389138 DDX58O95786 925 aaKnown RBP6.49□□□□□ -1.37
ERCC4-202ENST00000389138 ZBED1O96006 694 aa6.49□□□□□ -1.37
ERCC4-202ENST00000389138 ATP4AP20648 1035 aa6.49□□□□□ -1.37
ERCC4-202ENST00000389138 TXLNAP40222 546 aa6.49□□□□□ -1.37
ERCC4-202ENST00000389138 PRIM2P49643 509 aa6.49□□□□□ -1.37
ERCC4-202ENST00000389138 SEPHS1P49903 392 aa6.49□□□□□ -1.37
ERCC4-202ENST00000389138 RCAN1P53805 252 aa6.49□□□□□ -1.37
ERCC4-202ENST00000389138 WDR43Q15061 677 aaKnown RBP eCLIP6.49□□□□□ -1.37
ERCC4-202ENST00000389138 ZKSCAN8Q15776 578 aaPredicted RBP6.49□□□□□ -1.37
ERCC4-202ENST00000389138 ZNF438Q7Z4V0 828 aa6.49□□□□□ -1.37
ERCC4-202ENST00000389138 TRMT2AQ8IZ69 625 aaKnown RBP6.49□□□□□ -1.37
ERCC4-202ENST00000389138 ZBTB34Q8NCN2 500 aa6.49□□□□□ -1.37
ERCC4-202ENST00000389138 RHPN1Q8TCX5 695 aa6.49□□□□□ -1.37
ERCC4-202ENST00000389138 SSH3Q8TE77 659 aa6.49□□□□□ -1.37
ERCC4-202ENST00000389138 CENPIQ92674 756 aaPredicted RBP6.49□□□□□ -1.37
ERCC4-202ENST00000389138 TRIM63Q969Q1 353 aa6.49□□□□□ -1.37
ERCC4-202ENST00000389138 OXCT2Q9BYC2 517 aaPredicted RBP6.49□□□□□ -1.37
ERCC4-202ENST00000389138 GTPBP4Q9BZE4 634 aaKnown RBP6.49□□□□□ -1.37
ERCC4-202ENST00000389138 PHACTR1Q9C0D0 580 aa6.49□□□□□ -1.37
ERCC4-202ENST00000389138 NUCKS1Q9H1E3 243 aaKnown RBP6.49□□□□□ -1.37
ERCC4-202ENST00000389138 VPS33BQ9H267 617 aa6.49□□□□□ -1.37
ERCC4-202ENST00000389138 VPS11Q9H270 941 aa6.49□□□□□ -1.37
ERCC4-202ENST00000389138 BRD9Q9H8M2 597 aa6.49□□□□□ -1.37
ERCC4-202ENST00000389138 C14orf93Q9H972 538 aaKnown RBP6.49□□□□□ -1.37
ERCC4-202ENST00000389138 SLC52A2Q9HAB3 445 aa6.49□□□□□ -1.37
ERCC4-202ENST00000389138 RTEL1Q9NZ71 1219 aa6.49□□□□□ -1.37
ERCC4-202ENST00000389138 MARK1Q9P0L2 795 aa6.49□□□□□ -1.37
ERCC4-202ENST00000389138 PPM1HQ9ULR3 514 aa6.49□□□□□ -1.37
ERCC4-202ENST00000389138 USP54Q70EL1 1684 aa6.49□□□□□ -1.37
ERCC4-202ENST00000389138 CENPJQ9HC77 1338 aaPredicted RBP6.48□□□□□ -1.37
ERCC4-202ENST00000389138 POLR3AO14802 1390 aaPredicted RBP6.48□□□□□ -1.37
ERCC4-202ENST00000389138 TOMM70O94826 608 aa6.48□□□□□ -1.37
ERCC4-202ENST00000389138 EOMESO95936 686 aa6.48□□□□□ -1.37
ERCC4-202ENST00000389138 C6orf222P0C671 652 aaPredicted RBP6.48□□□□□ -1.37
ERCC4-202ENST00000389138 VSIG8P0DPA2 414 aa6.48□□□□□ -1.37
ERCC4-202ENST00000389138 VEGFAP15692 232 aaPredicted RBP6.48□□□□□ -1.37
ERCC4-202ENST00000389138 GRIK1P39086 918 aa6.48□□□□□ -1.37
ERCC4-202ENST00000389138 ADCYAP1R1P41586 468 aa6.48□□□□□ -1.37
ERCC4-202ENST00000389138 STAT1P42224 750 aa6.48□□□□□ -1.37
ERCC4-202ENST00000389138 MPP2Q14168 576 aa6.48□□□□□ -1.37
ERCC4-202ENST00000389138 ASIC2Q16515 512 aa6.48□□□□□ -1.37
ERCC4-202ENST00000389138 PEAR1Q5VY43 1037 aaPredicted RBP6.48□□□□□ -1.37
ERCC4-202ENST00000389138 FIGNL1Q6PIW4 674 aa6.48□□□□□ -1.37
ERCC4-202ENST00000389138 BICDL1Q6ZP65 573 aa6.48□□□□□ -1.37
ERCC4-202ENST00000389138 CCDC149Q6ZUS6 474 aa6.48□□□□□ -1.37
ERCC4-202ENST00000389138 ANKRD18AQ8IVF6 992 aa6.48□□□□□ -1.37
ERCC4-202ENST00000389138 SLC30A5Q8TAD4 765 aa6.48□□□□□ -1.37
ERCC4-202ENST00000389138 IRF7Q92985 503 aa6.48□□□□□ -1.37
ERCC4-202ENST00000389138 RIPOR3Q96MK2 946 aa6.48□□□□□ -1.37
ERCC4-202ENST00000389138 ZIC5Q96T25 663 aa6.48□□□□□ -1.37
ERCC4-202ENST00000389138 NUP88Q99567 741 aaPredicted RBP6.48□□□□□ -1.37
ERCC4-202ENST00000389138 HAUS7Q99871 368 aa6.48□□□□□ -1.37
ERCC4-202ENST00000389138 BHMT2Q9H2M3 363 aa6.48□□□□□ -1.37
ERCC4-202ENST00000389138 GPAMQ9HCL2 828 aa6.48□□□□□ -1.37
ERCC4-202ENST00000389138 ABCB6Q9NP58 842 aa6.48□□□□□ -1.37
ERCC4-202ENST00000389138 POGKQ9P215 609 aa6.48□□□□□ -1.37
ERCC4-202ENST00000389138 C5P01031 1676 aa6.48□□□□□ -1.37
ERCC4-202ENST00000389138 TNRC6CQ9HCJ0 1690 aaKnown RBP6.48□□□□□ -1.37
ERCC4-202ENST00000389138 DOT1LQ8TEK3 1739 aa6.47□□□□□ -1.37
ERCC4-202ENST00000389138 TMEM110-MUSTN1A8MSY1 372 aa6.47□□□□□ -1.37
ERCC4-202ENST00000389138 ZNF891A8MT65 544 aaPredicted RBP6.47□□□□□ -1.37
ERCC4-202ENST00000389138 POLBP06746 335 aa6.47□□□□□ -1.37
ERCC4-202ENST00000389138 RPL17P18621 184 aaKnown RBP6.47□□□□□ -1.37
ERCC4-202ENST00000389138 GRIA2P42262 883 aa6.47□□□□□ -1.37
ERCC4-202ENST00000389138 NPTX2P47972 431 aa6.47□□□□□ -1.37
ERCC4-202ENST00000389138 FXR1P51114 621 aaKnown RBP eCLIP6.47□□□□□ -1.37
ERCC4-202ENST00000389138 SEMA5AQ13591 1074 aa6.47□□□□□ -1.37
ERCC4-202ENST00000389138 TRIM61Q5EBN2 209 aa6.47□□□□□ -1.37
ERCC4-202ENST00000389138 ARSJQ5FYB0 599 aaPredicted RBP6.47□□□□□ -1.37
ERCC4-202ENST00000389138 IFIT1BQ5T764 474 aaKnown RBP6.47□□□□□ -1.37
ERCC4-202ENST00000389138 RASIP1Q5U651 963 aa6.47□□□□□ -1.37
ERCC4-202ENST00000389138 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.47□□□□□ -1.37
ERCC4-202ENST00000389138 CMIPQ8IY22 773 aa6.47□□□□□ -1.37
ERCC4-202ENST00000389138 DZIP1LQ8IYY4 767 aaKnown RBP6.47□□□□□ -1.37
ERCC4-202ENST00000389138 FAM193BQ96PV7 902 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms