RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 PDCD7Q8N8D1 485 aaKnown RBP13.23□□□□□ -0.29
KCNQ3-201ENST00000388996 LINC00301Q8NCQ3 95 aa13.23□□□□□ -0.29
KCNQ3-201ENST00000388996 ZMYND10O75800 440 aa13.23□□□□□ -0.29
KCNQ3-201ENST00000388996 ANKRD20A4Q4UJ75 823 aa13.23□□□□□ -0.29
KCNQ3-201ENST00000388996 ANKRD20A8PQ5CZ79 823 aa13.23□□□□□ -0.29
KCNQ3-201ENST00000388996 ANKRD20A2Q5SQ80 823 aa13.23□□□□□ -0.29
KCNQ3-201ENST00000388996 ANKRD20A1Q5TYW2 823 aa13.23□□□□□ -0.29
KCNQ3-201ENST00000388996 C1orf228Q6PIY5 440 aa13.23□□□□□ -0.29
KCNQ3-201ENST00000388996 LRRC43Q8N309 656 aa13.23□□□□□ -0.29
KCNQ3-201ENST00000388996 LMCD1Q9NZU5 365 aa13.23□□□□□ -0.29
KCNQ3-201ENST00000388996 TPX2Q9ULW0 747 aaKnown RBP13.23□□□□□ -0.29
KCNQ3-201ENST00000388996 MYO3AQ8NEV4 1616 aa13.23□□□□□ -0.29
KCNQ3-201ENST00000388996 LRRIQ1Q96JM4 1722 aa13.23□□□□□ -0.29
KCNQ3-201ENST00000388996 PDIK1LQ8N165 341 aa13.23□□□□□ -0.29
KCNQ3-201ENST00000388996 ZWILCHQ9H900 591 aa13.23□□□□□ -0.29
KCNQ3-201ENST00000388996 TCP11X2Q5H9J9 407 aa13.22□□□□□ -0.29
KCNQ3-201ENST00000388996 ZNF699Q32M78 642 aa13.22□□□□□ -0.29
KCNQ3-201ENST00000388996 TAF1BQ53T94 588 aaPredicted RBP13.22□□□□□ -0.29
KCNQ3-201ENST00000388996 ALS2CLQ60I27 953 aa13.22□□□□□ -0.29
KCNQ3-201ENST00000388996 OSBP2Q969R2 916 aa13.22□□□□□ -0.29
KCNQ3-201ENST00000388996 TSPYL2Q9H2G4 693 aaPredicted RBP13.22□□□□□ -0.29
KCNQ3-201ENST00000388996 SLC13A4Q9UKG4 626 aa13.22□□□□□ -0.29
KCNQ3-201ENST00000388996 RASGRF2O14827 1237 aa13.22□□□□□ -0.29
KCNQ3-201ENST00000388996 UBE2SQ16763 222 aa13.22□□□□□ -0.29
KCNQ3-201ENST00000388996 MASTLQ96GX5 879 aa13.22□□□□□ -0.29
KCNQ3-201ENST00000388996 RMDN3Q96TC7 470 aa13.22□□□□□ -0.29
KCNQ3-201ENST00000388996 TRIM4Q9C037 500 aa13.22□□□□□ -0.29
KCNQ3-201ENST00000388996 FEM1BQ9UK73 627 aa13.22□□□□□ -0.29
KCNQ3-201ENST00000388996 RFX7Q2KHR2 1363 aa13.22□□□□□ -0.29
KCNQ3-201ENST00000388996 ABCB11O95342 1321 aa13.22□□□□□ -0.29
KCNQ3-201ENST00000388996 FTCDO95954 541 aa13.22□□□□□ -0.29
KCNQ3-201ENST00000388996 INPP1P49441 399 aa13.22□□□□□ -0.29
KCNQ3-201ENST00000388996 PPP1R18Q6NYC8 613 aa13.22□□□□□ -0.29
KCNQ3-201ENST00000388996 RSBN1LQ6PCB5 846 aaPredicted RBP13.22□□□□□ -0.29
KCNQ3-201ENST00000388996 BCAS4Q8TDM0 211 aa13.22□□□□□ -0.29
KCNQ3-201ENST00000388996 HINFPQ9BQA5 517 aa13.22□□□□□ -0.29
KCNQ3-201ENST00000388996 BBS9Q3SYG4 887 aa13.22□□□□□ -0.29
KCNQ3-201ENST00000388996 CHD4Q14839 1912 aa13.22□□□□□ -0.29
KCNQ3-201ENST00000388996 PPRC1Q5VV67 1664 aaKnown RBP13.22□□□□□ -0.29
KCNQ3-201ENST00000388996 ZBTB5O15062 677 aa13.22□□□□□ -0.29
KCNQ3-201ENST00000388996 AP3B2Q13367 1082 aa13.22□□□□□ -0.29
KCNQ3-201ENST00000388996 GDAP1Q8TB36 358 aa13.22□□□□□ -0.29
KCNQ3-201ENST00000388996 FGD4Q96M96 766 aa13.22□□□□□ -0.29
KCNQ3-201ENST00000388996 DONSONQ9NYP3 566 aa13.22□□□□□ -0.29
KCNQ3-201ENST00000388996 SRPRBQ9Y5M8 271 aaKnown RBP13.22□□□□□ -0.29
KCNQ3-201ENST00000388996 CTNND1O60716 968 aaKnown RBP13.22□□□□□ -0.29
KCNQ3-201ENST00000388996 ACSL3O95573 720 aa13.22□□□□□ -0.29
KCNQ3-201ENST00000388996 SRRM1Q8IYB3 904 aaKnown RBP13.22□□□□□ -0.29
KCNQ3-201ENST00000388996 SLC10A4Q96EP9 437 aa13.22□□□□□ -0.29
KCNQ3-201ENST00000388996 XAB2Q9HCS7 855 aaKnown RBP13.22□□□□□ -0.29
KCNQ3-201ENST00000388996 CCT5P48643 541 aa13.22□□□□□ -0.29
KCNQ3-201ENST00000388996 MKRN3Q13064 507 aaKnown RBP13.22□□□□□ -0.29
KCNQ3-201ENST00000388996 WDR19Q8NEZ3 1342 aa13.22□□□□□ -0.29
KCNQ3-201ENST00000388996 MYL3P08590 195 aa13.21□□□□□ -0.29
KCNQ3-201ENST00000388996 SETSIPP0DME0 302 aa13.21□□□□□ -0.29
KCNQ3-201ENST00000388996 LLGL1Q15334 1064 aa13.21□□□□□ -0.29
KCNQ3-201ENST00000388996 SEPT12Q8IYM1 358 aa13.21□□□□□ -0.29
KCNQ3-201ENST00000388996 NRBP1Q9UHY1 535 aa13.21□□□□□ -0.29
KCNQ3-201ENST00000388996 FGGP02679 453 aa13.21□□□□□ -0.29
KCNQ3-201ENST00000388996 CHAMP1Q96JM3 812 aa13.21□□□□□ -0.29
KCNQ3-201ENST00000388996 PPME1Q9Y570 386 aa13.21□□□□□ -0.29
KCNQ3-201ENST00000388996 REREQ9P2R6 1566 aa13.21□□□□□ -0.29
KCNQ3-201ENST00000388996 CCNE1P24864 410 aa13.21□□□□□ -0.29
KCNQ3-201ENST00000388996 ELF1P32519 619 aa13.21□□□□□ -0.29
KCNQ3-201ENST00000388996 ART3Q13508 389 aa13.21□□□□□ -0.29
KCNQ3-201ENST00000388996 MCPH1Q8NEM0 835 aa13.21□□□□□ -0.29
KCNQ3-201ENST00000388996 NEK9Q8TD19 979 aa13.21□□□□□ -0.29
KCNQ3-201ENST00000388996 OVOS2A0A0G2JMS6 1433 aa13.21□□□□□ -0.29
KCNQ3-201ENST00000388996 OVOS2A0A0J9YW53 1432 aa13.21□□□□□ -0.29
KCNQ3-201ENST00000388996 OVOS2Q6IE36 1432 aa13.21□□□□□ -0.29
KCNQ3-201ENST00000388996 NEDD4P46934 1319 aa13.21□□□□□ -0.29
KCNQ3-201ENST00000388996 CASZ1Q86V15 1759 aa13.21□□□□□ -0.29
KCNQ3-201ENST00000388996 CHEK2O96017 543 aa13.21□□□□□ -0.29
KCNQ3-201ENST00000388996 ZMYND12Q9H0C1 365 aa13.21□□□□□ -0.29
KCNQ3-201ENST00000388996 PYCARDQ9ULZ3 195 aa13.21□□□□□ -0.29
KCNQ3-201ENST00000388996 RNF219Q5W0B1 726 aaPredicted RBP13.21□□□□□ -0.29
KCNQ3-201ENST00000388996 MRPL46Q9H2W6 279 aaKnown RBP13.21□□□□□ -0.29
KCNQ3-201ENST00000388996 MID2Q9UJV3 735 aa13.21□□□□□ -0.29
KCNQ3-201ENST00000388996 FAM83BQ5T0W9 1011 aa13.21□□□□□ -0.29
KCNQ3-201ENST00000388996 ANTXR1Q9H6X2 564 aa13.21□□□□□ -0.29
KCNQ3-201ENST00000388996 RCOR1Q9UKL0 485 aa13.21□□□□□ -0.29
KCNQ3-201ENST00000388996 SNRNP48Q6IEG0 339 aaKnown RBP13.21□□□□□ -0.3
KCNQ3-201ENST00000388996 PROM2Q8N271 834 aa13.21□□□□□ -0.3
KCNQ3-201ENST00000388996 GPR101Q96P66 508 aaPredicted RBP13.21□□□□□ -0.3
KCNQ3-201ENST00000388996 PIH1D3Q9NQM4 214 aaKnown RBP13.21□□□□□ -0.3
KCNQ3-201ENST00000388996 MTMR1Q13613 665 aa13.21□□□□□ -0.3
KCNQ3-201ENST00000388996 PLEKHA8P1O95397 391 aa13.21□□□□□ -0.3
KCNQ3-201ENST00000388996 PPARGP37231 505 aaPredicted RBP13.21□□□□□ -0.3
KCNQ3-201ENST00000388996 SLCO1A2P46721 670 aa13.21□□□□□ -0.3
KCNQ3-201ENST00000388996 KRT39Q6A163 491 aa13.21□□□□□ -0.3
KCNQ3-201ENST00000388996 HSPH1Q92598 858 aa13.21□□□□□ -0.3
KCNQ3-201ENST00000388996 MAGED2Q9UNF1 606 aaPredicted RBP13.21□□□□□ -0.3
KCNQ3-201ENST00000388996 A0A087WWV3 80 aa13.2□□□□□ -0.3
KCNQ3-201ENST00000388996 ZNF667Q5HYK9 610 aa13.2□□□□□ -0.3
KCNQ3-201ENST00000388996 OR6B2Q6IFH4 312 aa13.2□□□□□ -0.3
KCNQ3-201ENST00000388996 BZW1Q7L1Q6 419 aaKnown RBP13.2□□□□□ -0.3
KCNQ3-201ENST00000388996 DNAJC8O75937 253 aaPredicted RBP13.2□□□□□ -0.3
KCNQ3-201ENST00000388996 CENPUQ71F23 418 aa13.2□□□□□ -0.3
KCNQ3-201ENST00000388996 K7ERI5 159 aa13.2□□□□□ -0.3
KCNQ3-201ENST00000388996 TNFAIP2Q03169 654 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms