RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 KHSRPQ92945 711 aaKnown RBP eCLIP16.05■□□□□ 0.16
SHOX-202ENST00000381575 TNPO1Q92973 898 aaKnown RBP16.05■□□□□ 0.16
SHOX-202ENST00000381575 ZNF689Q96CS4 500 aaPredicted RBP16.05■□□□□ 0.16
SHOX-202ENST00000381575 GABBR1Q9UBS5 961 aa16.05■□□□□ 0.16
SHOX-202ENST00000381575 NOC2LQ9Y3T9 749 aaKnown RBP16.05■□□□□ 0.16
SHOX-202ENST00000381575 MRPL42Q9Y6G3 142 aaKnown RBP16.05■□□□□ 0.16
SHOX-202ENST00000381575 CHMP2AO43633 222 aa16.04■□□□□ 0.16
SHOX-202ENST00000381575 DGKIO75912 1065 aa16.04■□□□□ 0.16
SHOX-202ENST00000381575 VTNP04004 478 aa16.04■□□□□ 0.16
SHOX-202ENST00000381575 COL9A1P20849 921 aa16.04■□□□□ 0.16
SHOX-202ENST00000381575 BMPR1AP36894 532 aa16.04■□□□□ 0.16
SHOX-202ENST00000381575 KIZQ2M2Z5 673 aa16.04■□□□□ 0.16
SHOX-202ENST00000381575 ZNF746Q6NUN9 644 aaPredicted RBP16.04■□□□□ 0.16
SHOX-202ENST00000381575 CCDC148Q8NFR7 591 aa16.04■□□□□ 0.16
SHOX-202ENST00000381575 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.04■□□□□ 0.16
SHOX-202ENST00000381575 AIFM3Q96NN9 605 aa16.04■□□□□ 0.16
SHOX-202ENST00000381575 ZSWIM6Q9HCJ5 1215 aa16.04■□□□□ 0.16
SHOX-202ENST00000381575 CD320Q9NPF0 282 aa16.04■□□□□ 0.16
SHOX-202ENST00000381575 SAMM50Q9Y512 469 aa16.04■□□□□ 0.16
SHOX-202ENST00000381575 COL1A2P08123 1366 aa16.04■□□□□ 0.16
SHOX-202ENST00000381575 KDM3AQ9Y4C1 1321 aa16.03■□□□□ 0.16
SHOX-202ENST00000381575 MSH4O15457 936 aa16.03■□□□□ 0.16
SHOX-202ENST00000381575 C22orf31O95567 290 aa16.03■□□□□ 0.16
SHOX-202ENST00000381575 RPLP2P05387 115 aaKnown RBP16.03■□□□□ 0.16
SHOX-202ENST00000381575 IL9P15248 144 aa16.03■□□□□ 0.16
SHOX-202ENST00000381575 CLCN3P51790 818 aa16.03■□□□□ 0.16
SHOX-202ENST00000381575 NLRP5P59047 1200 aa16.03■□□□□ 0.16
SHOX-202ENST00000381575 UGCGQ16739 394 aa16.03■□□□□ 0.16
SHOX-202ENST00000381575 ZNF484Q5JVG2 852 aa16.03■□□□□ 0.16
SHOX-202ENST00000381575 NPAS4Q8IUM7 802 aa16.03■□□□□ 0.16
SHOX-202ENST00000381575 METTL13Q8N6R0 699 aa16.03■□□□□ 0.16
SHOX-202ENST00000381575 BICD2Q8TD16 824 aa16.03■□□□□ 0.16
SHOX-202ENST00000381575 CLP1Q92989 425 aaKnown RBP16.03■□□□□ 0.16
SHOX-202ENST00000381575 ZNF668Q96K58 619 aaPredicted RBP16.03■□□□□ 0.16
SHOX-202ENST00000381575 OSMRQ99650 979 aa16.03■□□□□ 0.16
SHOX-202ENST00000381575 C11orf84Q9BUA3 381 aaPredicted RBP16.03■□□□□ 0.16
SHOX-202ENST00000381575 NSUN3Q9H649 340 aaKnown RBP16.03■□□□□ 0.16
SHOX-202ENST00000381575 EPHX3Q9H6B9 360 aa16.03■□□□□ 0.16
SHOX-202ENST00000381575 ERVK-5Q9HDB9 667 aa16.03■□□□□ 0.16
SHOX-202ENST00000381575 ALG13Q9NP73 1137 aaKnown RBP16.03■□□□□ 0.16
SHOX-202ENST00000381575 TBC1D22BQ9NU19 505 aa16.03■□□□□ 0.16
SHOX-202ENST00000381575 MAFBQ9Y5Q3 323 aaPredicted RBP16.03■□□□□ 0.16
SHOX-202ENST00000381575 CYP46A1Q9Y6A2 500 aa16.03■□□□□ 0.16
SHOX-202ENST00000381575 SQORQ9Y6N5 450 aa16.03■□□□□ 0.16
SHOX-202ENST00000381575 RPS6KA5O75582 802 aa16.02■□□□□ 0.16
SHOX-202ENST00000381575 PSAPP07602 524 aa16.02■□□□□ 0.16
SHOX-202ENST00000381575 CIITAP33076 1130 aa16.02■□□□□ 0.16
SHOX-202ENST00000381575 GTF2F1P35269 517 aaKnown RBP eCLIP16.02■□□□□ 0.16
SHOX-202ENST00000381575 EVCP57679 992 aa16.02■□□□□ 0.16
SHOX-202ENST00000381575 SSRP1Q08945 709 aaKnown RBP16.02■□□□□ 0.16
SHOX-202ENST00000381575 LEXMQ3ZCV2 418 aa16.02■□□□□ 0.16
SHOX-202ENST00000381575 MCTP2Q6DN12 878 aa16.02■□□□□ 0.16
SHOX-202ENST00000381575 PTCRAQ6ISU1 281 aaPredicted RBP16.02■□□□□ 0.16
SHOX-202ENST00000381575 CRIPAKQ8N1N5 446 aa16.02■□□□□ 0.16
SHOX-202ENST00000381575 NME8Q8N427 588 aa16.02■□□□□ 0.16
SHOX-202ENST00000381575 FTHL17Q9BXU8 183 aa16.02■□□□□ 0.16
SHOX-202ENST00000381575 CLDND1Q9NY35 253 aa16.02■□□□□ 0.16
SHOX-202ENST00000381575 HCSTQ9UBK5 93 aa16.02■□□□□ 0.16
SHOX-202ENST00000381575 PCDHA10Q9Y5I2 948 aa16.02■□□□□ 0.16
SHOX-202ENST00000381575 C5orf67F2Z3F1 127 aa16.01■□□□□ 0.15
SHOX-202ENST00000381575 ZNF862O60290 1169 aa16.01■□□□□ 0.15
SHOX-202ENST00000381575 TDP2O95551 362 aa16.01■□□□□ 0.15
SHOX-202ENST00000381575 CLUL1Q15846 466 aa16.01■□□□□ 0.15
SHOX-202ENST00000381575 FAM228AQ86W67 206 aa16.01■□□□□ 0.15
SHOX-202ENST00000381575 SMAP1Q8IYB5 467 aaPredicted RBP16.01■□□□□ 0.15
SHOX-202ENST00000381575 TRIM22Q8IYM9 498 aa16.01■□□□□ 0.15
SHOX-202ENST00000381575 LRRC71Q8N4P6 559 aa16.01■□□□□ 0.15
SHOX-202ENST00000381575 TBCKQ8TEA7 893 aa16.01■□□□□ 0.15
SHOX-202ENST00000381575 BBXQ8WY36 941 aaPredicted RBP16.01■□□□□ 0.15
SHOX-202ENST00000381575 ADAM2Q99965 735 aa16.01■□□□□ 0.15
SHOX-202ENST00000381575 UNC45AQ9H3U1 944 aa16.01■□□□□ 0.15
SHOX-202ENST00000381575 LRFN2Q9ULH4 789 aa16.01■□□□□ 0.15
SHOX-202ENST00000381575 ST3GAL5Q9UNP4 418 aa16.01■□□□□ 0.15
SHOX-202ENST00000381575 WDR64B1ANS9 1081 aa16■□□□□ 0.15
SHOX-202ENST00000381575 CPLX1O14810 134 aa16■□□□□ 0.15
SHOX-202ENST00000381575 GAS7O60861 476 aa16■□□□□ 0.15
SHOX-202ENST00000381575 RB1P06400 928 aa16■□□□□ 0.15
SHOX-202ENST00000381575 DNAJB1P25685 340 aa16■□□□□ 0.15
SHOX-202ENST00000381575 PRKCEQ02156 737 aa16■□□□□ 0.15
SHOX-202ENST00000381575 HYAL1Q12794 435 aa16■□□□□ 0.15
SHOX-202ENST00000381575 CMTR2Q8IYT2 770 aaKnown RBP16■□□□□ 0.15
SHOX-202ENST00000381575 NEK9Q8TD19 979 aa16■□□□□ 0.15
SHOX-202ENST00000381575 IGFLR1Q9H665 355 aa16■□□□□ 0.15
SHOX-202ENST00000381575 DISC1Q9NRI5 854 aa16■□□□□ 0.15
SHOX-202ENST00000381575 PCDHA4Q9UN74 947 aa16■□□□□ 0.15
SHOX-202ENST00000381575 AKT3Q9Y243 479 aa16■□□□□ 0.15
SHOX-202ENST00000381575 RWDD3Q9Y3V2 267 aa16■□□□□ 0.15
SHOX-202ENST00000381575 DENND3A2RUS2 1198 aa16■□□□□ 0.15
SHOX-202ENST00000381575 TMEM150BA6NC51 233 aa16■□□□□ 0.15
SHOX-202ENST00000381575 FAM86C2PA6NEL3 165 aa16■□□□□ 0.15
SHOX-202ENST00000381575 LINC01565O15544 149 aa16■□□□□ 0.15
SHOX-202ENST00000381575 GPR32O75388 356 aa16■□□□□ 0.15
SHOX-202ENST00000381575 ITGB1P05556 798 aa16■□□□□ 0.15
SHOX-202ENST00000381575 STAG3L1P0CL83 205 aa16■□□□□ 0.15
SHOX-202ENST00000381575 SARSP49591 514 aaKnown RBP16■□□□□ 0.15
SHOX-202ENST00000381575 DLX2Q07687 328 aaPredicted RBP16■□□□□ 0.15
SHOX-202ENST00000381575 CAMK1Q14012 370 aa16■□□□□ 0.15
SHOX-202ENST00000381575 NPY5RQ15761 445 aa16■□□□□ 0.15
SHOX-202ENST00000381575 FAM102BQ5T8I3 360 aa16■□□□□ 0.15
SHOX-202ENST00000381575 LRCH2Q5VUJ6 765 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms