RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 TCHHL1Q5QJ38 904 aaPredicted RBP5.24□□□□□ -1.57
PTPRD-203ENST00000381196 MFSD14BQ5SR56 506 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 CC2D2BQ6DHV5 1058 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 NOSTRINQ8IVI9 506 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 CCDC24Q8N4L8 307 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 ITPKCQ96DU7 683 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 ZC4H2Q9NQZ6 224 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 USP31Q70CQ4 1352 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 CRCPO75575 148 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 SERPINB2P05120 415 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 VHLP40337 213 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 TUBA1BP68363 451 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 TUBA1AQ71U36 451 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 NLRX1Q86UT6 975 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 FMO2Q99518 471 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 ZBED2Q9BTP6 218 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 MOV10Q9HCE1 1003 aaKnown RBP5.24□□□□□ -1.57
PTPRD-203ENST00000381196 GPCPD1Q9NPB8 672 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 SERPINA10Q9UK55 444 aa5.24□□□□□ -1.57
PTPRD-203ENST00000381196 WDR46O15213 610 aaKnown RBP5.23□□□□□ -1.57
PTPRD-203ENST00000381196 ITGA6P23229 1130 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 TCP10Q12799 353 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 EPS8Q12929 822 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 KCNB1Q14721 858 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 PEX26Q7Z412 305 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 DNAJC10Q8IXB1 793 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 SPATA5Q8NB90 893 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 ST13P5Q8NFI4 369 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-203ENST00000381196 DCLRE1BQ9H816 532 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 GPBP1L1Q9HC44 474 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-203ENST00000381196 DNAJB4Q9UDY4 337 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 ENOPH1Q9UHY7 261 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 ATP6V0A2Q9Y487 856 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 DIP2BQ9P265 1576 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 MCF2P10911 925 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 ADSLP30566 484 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-203ENST00000381196 ASIC2Q16515 512 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 EXOC8Q8IYI6 725 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 PLBD2Q8NHP8 589 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 HAUS7Q99871 368 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 ALG1Q9BT22 464 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.23□□□□□ -1.57
PTPRD-203ENST00000381196 CHMP2AO43633 222 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 MSL3P1P0C860 447 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 ACTN1P12814 892 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 HOXD10P28358 340 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 CCT5P48643 541 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 GNPTABQ3T906 1256 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 KIAA1841Q6NSI8 718 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 SND1Q7KZF4 910 aaKnown RBP eCLIP5.23□□□□□ -1.57
PTPRD-203ENST00000381196 ABI1Q8IZP0 508 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 HDAC7Q8WUI4 952 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 ATXN2LQ8WWM7 1075 aaKnown RBP5.23□□□□□ -1.57
PTPRD-203ENST00000381196 SYNDIG1Q9H7V2 258 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 CAAP1Q9H8G2 361 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 AATFQ9NY61 560 aaKnown RBP eCLIP5.23□□□□□ -1.57
PTPRD-203ENST00000381196 ZMYND8Q9ULU4 1186 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-203ENST00000381196 TMED5Q9Y3A6 229 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 TJP1Q07157 1748 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 ERVV-2B6SEH9 535 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 MDM2Q00987 491 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-203ENST00000381196 SPARCL1Q14515 664 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 RSRC2Q7L4I2 434 aaKnown RBP5.23□□□□□ -1.57
PTPRD-203ENST00000381196 PROCA1Q8NCQ7 364 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-203ENST00000381196 KLHDC4Q8TBB5 520 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 CHURC1Q8WUH1 139 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 KCNB2Q92953 911 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 RNF26Q9BY78 433 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-203ENST00000381196 UPF3AQ9H1J1 476 aaKnown RBP5.23□□□□□ -1.57
PTPRD-203ENST00000381196 EHD1Q9H4M9 534 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 SAR1AQ9NR31 198 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 TRPC6Q9Y210 931 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 KANSL1LA0AUZ9 987 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 LIG3P49916 1009 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 RPS8P62241 208 aaKnown RBP5.23□□□□□ -1.57
PTPRD-203ENST00000381196 RESP18Q5W5W9 173 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 KRT80Q6KB66 452 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 MAB21L3Q8N8X9 362 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 EPSTI1Q96J88 318 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 SELENOSQ9BQE4 189 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 OSBPL1AQ9BXW6 950 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 GCOM2Q9BZD3 368 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-203ENST00000381196 PLK2Q9NYY3 685 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 MYH7BA7E2Y1 1941 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 ARHGAP42A6NI28 874 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 PPEF1O14829 653 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-203ENST00000381196 FESP07332 822 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 SV2BQ7L1I2 683 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 LSM14AQ8ND56 463 aaKnown RBP5.23□□□□□ -1.57
PTPRD-203ENST00000381196 FAM81AQ8TBF8 368 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 RSPH1Q8WYR4 309 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 KLHL29Q96CT2 875 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 LRRC37BQ96QE4 947 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 MTIF3Q9H2K0 278 aaKnown RBP5.23□□□□□ -1.57
PTPRD-203ENST00000381196 ATAD3AQ9NVI7 634 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 BAIAP2L1Q9UHR4 511 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 CNOT7Q9UIV1 285 aaKnown RBP5.23□□□□□ -1.57
PTPRD-203ENST00000381196 CCDC88AQ3V6T2 1871 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 STK25O00506 426 aa5.23□□□□□ -1.57
PTPRD-203ENST00000381196 SERPINI2O75830 405 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms