RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 HIP1RO75146 1068 aa13.28□□□□□ -0.28
GABPB1-203ENST00000380877 TTLL4Q14679 1199 aa13.28□□□□□ -0.28
GABPB1-203ENST00000380877 TRIM11Q96F44 468 aa13.28□□□□□ -0.28
GABPB1-203ENST00000380877 HINFPQ9BQA5 517 aa13.28□□□□□ -0.28
GABPB1-203ENST00000380877 JPH1Q9HDC5 661 aaPredicted RBP13.28□□□□□ -0.28
GABPB1-203ENST00000380877 PARP2Q9UGN5 583 aa13.28□□□□□ -0.28
GABPB1-203ENST00000380877 NPHP3-ACAD11A0A0J9YXS1 232 aa13.28□□□□□ -0.28
GABPB1-203ENST00000380877 VPS41P49754 854 aa13.28□□□□□ -0.28
GABPB1-203ENST00000380877 FXR2P51116 673 aaKnown RBP eCLIP13.28□□□□□ -0.28
GABPB1-203ENST00000380877 SURF1Q15526 300 aa13.28□□□□□ -0.28
GABPB1-203ENST00000380877 UAP1Q16222 522 aaPredicted RBP13.28□□□□□ -0.28
GABPB1-203ENST00000380877 PROCA1Q8NCQ7 364 aaPredicted RBP13.28□□□□□ -0.28
GABPB1-203ENST00000380877 MMP19Q99542 508 aa13.28□□□□□ -0.28
GABPB1-203ENST00000380877 SH2D3AQ9BRG2 576 aa13.28□□□□□ -0.28
GABPB1-203ENST00000380877 NUB1Q9Y5A7 615 aa13.28□□□□□ -0.28
GABPB1-203ENST00000380877 A0A1W2PQC6 194 aa13.28□□□□□ -0.28
GABPB1-203ENST00000380877 NMT1P30419 496 aaKnown RBP13.28□□□□□ -0.28
GABPB1-203ENST00000380877 CXCR5P32302 372 aa13.28□□□□□ -0.28
GABPB1-203ENST00000380877 COPB2P35606 906 aa13.28□□□□□ -0.28
GABPB1-203ENST00000380877 MTMR3Q13615 1198 aa13.28□□□□□ -0.28
GABPB1-203ENST00000380877 HAUS6Q7Z4H7 955 aa13.28□□□□□ -0.28
GABPB1-203ENST00000380877 CCDC89Q8N998 374 aa13.28□□□□□ -0.28
GABPB1-203ENST00000380877 CCDC63Q8NA47 563 aa13.28□□□□□ -0.28
GABPB1-203ENST00000380877 ATG4CQ96DT6 458 aa13.28□□□□□ -0.28
GABPB1-203ENST00000380877 MED10Q9BTT4 135 aa13.28□□□□□ -0.28
GABPB1-203ENST00000380877 STK10O94804 968 aaKnown RBP13.28□□□□□ -0.28
GABPB1-203ENST00000380877 CD58P19256 250 aa13.28□□□□□ -0.28
GABPB1-203ENST00000380877 DPH5Q9H2P9 285 aa13.28□□□□□ -0.28
GABPB1-203ENST00000380877 KIAA1586Q9HCI6 787 aa13.28□□□□□ -0.28
GABPB1-203ENST00000380877 DDX4Q9NQI0 724 aaKnown RBP13.28□□□□□ -0.28
GABPB1-203ENST00000380877 NKIRAS1Q9NYS0 192 aa13.28□□□□□ -0.28
GABPB1-203ENST00000380877 RGPD8O14715 1765 aaPredicted RBP13.28□□□□□ -0.28
GABPB1-203ENST00000380877 MAPK4P31152 587 aa13.27□□□□□ -0.28
GABPB1-203ENST00000380877 SHMT1P34896 483 aa13.27□□□□□ -0.28
GABPB1-203ENST00000380877 CCDC14Q49A88 953 aa13.27□□□□□ -0.28
GABPB1-203ENST00000380877 SREK1Q8WXA9 508 aaKnown RBP13.27□□□□□ -0.28
GABPB1-203ENST00000380877 MRRFQ96E11 262 aaKnown RBP13.27□□□□□ -0.28
GABPB1-203ENST00000380877 MTRQ99707 1265 aa13.27□□□□□ -0.28
GABPB1-203ENST00000380877 RPF1Q9H9Y2 349 aaKnown RBP13.27□□□□□ -0.28
GABPB1-203ENST00000380877 LIMA1Q9UHB6 759 aaKnown RBP13.27□□□□□ -0.28
GABPB1-203ENST00000380877 ATP5DP30049 168 aa13.27□□□□□ -0.29
GABPB1-203ENST00000380877 NBPF9Q3BBW0 867 aa13.27□□□□□ -0.29
GABPB1-203ENST00000380877 KRT71Q3SY84 523 aa13.27□□□□□ -0.29
GABPB1-203ENST00000380877 DACT2Q5SW24 774 aa13.27□□□□□ -0.29
GABPB1-203ENST00000380877 FAM217BQ9NTX9 383 aaPredicted RBP13.27□□□□□ -0.29
GABPB1-203ENST00000380877 LTN1O94822 1766 aa13.27□□□□□ -0.29
GABPB1-203ENST00000380877 EBAG9O00559 213 aa13.27□□□□□ -0.29
GABPB1-203ENST00000380877 YWHABP31946 246 aaKnown RBP13.27□□□□□ -0.29
GABPB1-203ENST00000380877 C15orf52Q6ZUT6 534 aaKnown RBP13.27□□□□□ -0.29
GABPB1-203ENST00000380877 REEP2Q9BRK0 252 aa13.27□□□□□ -0.29
GABPB1-203ENST00000380877 FAM213AQ9BRX8 229 aa13.27□□□□□ -0.29
GABPB1-203ENST00000380877 STIM2Q9P246 746 aa13.27□□□□□ -0.29
GABPB1-203ENST00000380877 A0A1B0GTH6 734 aa13.27□□□□□ -0.29
GABPB1-203ENST00000380877 PDXKO00764 312 aa13.27□□□□□ -0.29
GABPB1-203ENST00000380877 SLC37A4O43826 429 aa13.27□□□□□ -0.29
GABPB1-203ENST00000380877 RPA1P27694 616 aa13.27□□□□□ -0.29
GABPB1-203ENST00000380877 TM4SF1P30408 202 aa13.27□□□□□ -0.29
GABPB1-203ENST00000380877 GUCY2DQ02846 1103 aa13.27□□□□□ -0.29
GABPB1-203ENST00000380877 PPFIA1Q13136 1202 aa13.27□□□□□ -0.29
GABPB1-203ENST00000380877 GRIK5Q16478 980 aa13.27□□□□□ -0.29
GABPB1-203ENST00000380877 APOBEC3HQ6NTF7 200 aaKnown RBP13.27□□□□□ -0.29
GABPB1-203ENST00000380877 CROCCP2Q86T23 111 aa13.27□□□□□ -0.29
GABPB1-203ENST00000380877 KRT12Q99456 494 aa13.27□□□□□ -0.29
GABPB1-203ENST00000380877 NBPF3Q9H094 633 aa13.27□□□□□ -0.29
GABPB1-203ENST00000380877 RIOX1Q9H6W3 641 aa13.27□□□□□ -0.29
GABPB1-203ENST00000380877 CAPN9O14815 690 aa13.26□□□□□ -0.29
GABPB1-203ENST00000380877 HPSEQ9Y251 543 aa13.26□□□□□ -0.29
GABPB1-203ENST00000380877 NALCNQ8IZF0 1738 aa13.26□□□□□ -0.29
GABPB1-203ENST00000380877 OAS2P29728 719 aaKnown RBP13.26□□□□□ -0.29
GABPB1-203ENST00000380877 CATSPER4Q7RTX7 472 aa13.26□□□□□ -0.29
GABPB1-203ENST00000380877 GMCL1Q96IK5 515 aa13.26□□□□□ -0.29
GABPB1-203ENST00000380877 POLR3FQ9H1D9 316 aaPredicted RBP13.26□□□□□ -0.29
GABPB1-203ENST00000380877 GINM1Q9NU53 330 aa13.26□□□□□ -0.29
GABPB1-203ENST00000380877 TRIM49P0CI25 452 aa13.26□□□□□ -0.29
GABPB1-203ENST00000380877 TRIM49CP0CI26 452 aa13.26□□□□□ -0.29
GABPB1-203ENST00000380877 VAMP7P51809 220 aa13.26□□□□□ -0.29
GABPB1-203ENST00000380877 KRT81Q14533 505 aa13.26□□□□□ -0.29
GABPB1-203ENST00000380877 PPP1R21Q6ZMI0 780 aa13.26□□□□□ -0.29
GABPB1-203ENST00000380877 ELOA2Q8IYF1 753 aaPredicted RBP13.26□□□□□ -0.29
GABPB1-203ENST00000380877 SCYL3Q8IZE3 742 aa13.26□□□□□ -0.29
GABPB1-203ENST00000380877 RIT2Q99578 217 aa13.26□□□□□ -0.29
GABPB1-203ENST00000380877 MXRA8Q9BRK3 442 aa13.26□□□□□ -0.29
GABPB1-203ENST00000380877 TMX2Q9Y320 296 aa13.26□□□□□ -0.29
GABPB1-203ENST00000380877 ADGRG1Q9Y653 693 aa13.26□□□□□ -0.29
GABPB1-203ENST00000380877 GOLGA8SH3BPF8 625 aa13.25□□□□□ -0.29
GABPB1-203ENST00000380877 SMIM22K7EJ46 135 aa13.25□□□□□ -0.29
GABPB1-203ENST00000380877 RPS6P62753 249 aaKnown RBP13.25□□□□□ -0.29
GABPB1-203ENST00000380877 TKFCQ3LXA3 575 aa13.25□□□□□ -0.29
GABPB1-203ENST00000380877 MAGOHBQ96A72 148 aaKnown RBP13.25□□□□□ -0.29
GABPB1-203ENST00000380877 SPATA33Q96N06 139 aa13.25□□□□□ -0.29
GABPB1-203ENST00000380877 KCNQ5Q9NR82 932 aa13.25□□□□□ -0.29
GABPB1-203ENST00000380877 PGRMC1O00264 195 aaKnown RBP13.25□□□□□ -0.29
GABPB1-203ENST00000380877 ANKS4BQ8N8V4 417 aa13.25□□□□□ -0.29
GABPB1-203ENST00000380877 ZKSCAN4Q969J2 545 aaPredicted RBP13.25□□□□□ -0.29
GABPB1-203ENST00000380877 NACA2Q9H009 215 aa13.25□□□□□ -0.29
GABPB1-203ENST00000380877 ODF2LQ9ULJ1 636 aa13.25□□□□□ -0.29
GABPB1-203ENST00000380877 SLC26A4O43511 780 aa13.25□□□□□ -0.29
GABPB1-203ENST00000380877 ADCY8P40145 1251 aa13.25□□□□□ -0.29
GABPB1-203ENST00000380877 SCARA5Q6ZMJ2 495 aa13.25□□□□□ -0.29
GABPB1-203ENST00000380877 GRK7Q8WTQ7 553 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms