RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 CHEK2O96017 543 aa18.31■□□□□ 0.52
COL4A3BP-203ENST00000380494 MRPS25P82663 173 aaKnown RBP18.31■□□□□ 0.52
COL4A3BP-203ENST00000380494 TFDP1Q14186 410 aa18.31■□□□□ 0.52
COL4A3BP-203ENST00000380494 DNAJC10Q8IXB1 793 aa18.31■□□□□ 0.52
COL4A3BP-203ENST00000380494 OSBP2Q969R2 916 aa18.31■□□□□ 0.52
COL4A3BP-203ENST00000380494 THOC1Q96FV9 657 aaKnown RBP18.31■□□□□ 0.52
COL4A3BP-203ENST00000380494 HDAC6Q9UBN7 1215 aa18.31■□□□□ 0.52
COL4A3BP-203ENST00000380494 GDAQ9Y2T3 454 aa18.31■□□□□ 0.52
COL4A3BP-203ENST00000380494 BTDP43251 543 aa18.3■□□□□ 0.52
COL4A3BP-203ENST00000380494 PHKG2P15735 406 aa18.3■□□□□ 0.52
COL4A3BP-203ENST00000380494 MRPS35P82673 323 aaKnown RBP18.3■□□□□ 0.52
COL4A3BP-203ENST00000380494 SLFN13Q68D06 897 aa18.3■□□□□ 0.52
COL4A3BP-203ENST00000380494 CHRNDQ07001 517 aa18.3■□□□□ 0.52
COL4A3BP-203ENST00000380494 TAF1BQ53T94 588 aaPredicted RBP18.3■□□□□ 0.52
COL4A3BP-203ENST00000380494 FAM160B1Q5W0V3 765 aa18.3■□□□□ 0.52
COL4A3BP-203ENST00000380494 RASGRP2Q7LDG7 609 aa18.3■□□□□ 0.52
COL4A3BP-203ENST00000380494 DHX38Q92620 1227 aaKnown RBP18.3■□□□□ 0.52
COL4A3BP-203ENST00000380494 ATP6V0A1Q93050 837 aa18.3■□□□□ 0.52
COL4A3BP-203ENST00000380494 WNT8AQ9H1J5 351 aa18.3■□□□□ 0.52
COL4A3BP-203ENST00000380494 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.3■□□□□ 0.52
COL4A3BP-203ENST00000380494 SNX12Q9UMY4 172 aa18.3■□□□□ 0.52
COL4A3BP-203ENST00000380494 CDK12Q9NYV4 1490 aaPredicted RBP18.3■□□□□ 0.52
COL4A3BP-203ENST00000380494 PALM3A6NDB9 673 aaPredicted RBP18.3■□□□□ 0.52
COL4A3BP-203ENST00000380494 PRPSAP2O60256 369 aa18.3■□□□□ 0.52
COL4A3BP-203ENST00000380494 DNAAF3Q8N9W5 541 aa18.3■□□□□ 0.52
COL4A3BP-203ENST00000380494 MCUQ8NE86 351 aa18.3■□□□□ 0.52
COL4A3BP-203ENST00000380494 ZNF577Q9BSK1 485 aa18.3■□□□□ 0.52
COL4A3BP-203ENST00000380494 THRAP3Q9Y2W1 955 aaKnown RBP18.3■□□□□ 0.52
COL4A3BP-203ENST00000380494 ATP2B4P23634 1241 aa18.29■□□□□ 0.52
COL4A3BP-203ENST00000380494 SAMD9Q5K651 1589 aa18.29■□□□□ 0.52
COL4A3BP-203ENST00000380494 GLG1Q92896 1179 aa18.29■□□□□ 0.52
COL4A3BP-203ENST00000380494 KMT5AQ9NQR1 393 aa18.29■□□□□ 0.52
COL4A3BP-203ENST00000380494 ZSWIM5Q9P217 1185 aa18.29■□□□□ 0.52
COL4A3BP-203ENST00000380494 M0QZ92 97 aa18.29■□□□□ 0.52
COL4A3BP-203ENST00000380494 GYG1P46976 350 aa18.29■□□□□ 0.52
COL4A3BP-203ENST00000380494 IQCB1Q15051 598 aa18.29■□□□□ 0.52
COL4A3BP-203ENST00000380494 SYDE1Q6ZW31 735 aaPredicted RBP18.29■□□□□ 0.52
COL4A3BP-203ENST00000380494 PODNQ7Z5L7 613 aa18.29■□□□□ 0.52
COL4A3BP-203ENST00000380494 CCDC17Q96LX7 622 aa18.29■□□□□ 0.52
COL4A3BP-203ENST00000380494 SLC4A7Q9Y6M7 1214 aa18.29■□□□□ 0.52
COL4A3BP-203ENST00000380494 ZBED1O96006 694 aa18.29■□□□□ 0.52
COL4A3BP-203ENST00000380494 RFX1P22670 979 aa18.29■□□□□ 0.52
COL4A3BP-203ENST00000380494 DAB2IPQ5VWQ8 1189 aa18.29■□□□□ 0.52
COL4A3BP-203ENST00000380494 PUS7LQ9H0K6 701 aaKnown RBP18.29■□□□□ 0.52
COL4A3BP-203ENST00000380494 SMYD3Q9H7B4 428 aa18.29■□□□□ 0.52
COL4A3BP-203ENST00000380494 PRCPP42785 496 aa18.29■□□□□ 0.52
COL4A3BP-203ENST00000380494 CERKLQ49MI3 558 aaPredicted RBP18.29■□□□□ 0.52
COL4A3BP-203ENST00000380494 CCNI2Q6ZMN8 369 aaPredicted RBP18.29■□□□□ 0.52
COL4A3BP-203ENST00000380494 FAF2Q96CS3 445 aa18.29■□□□□ 0.52
COL4A3BP-203ENST00000380494 GCOM2Q9BZD3 368 aaPredicted RBP18.29■□□□□ 0.52
COL4A3BP-203ENST00000380494 PFASO15067 1338 aa18.29■□□□□ 0.52
COL4A3BP-203ENST00000380494 STAT4Q14765 748 aa18.29■□□□□ 0.52
COL4A3BP-203ENST00000380494 HIPK4Q8NE63 616 aa18.29■□□□□ 0.52
COL4A3BP-203ENST00000380494 MTA3Q9BTC8 594 aa18.29■□□□□ 0.52
COL4A3BP-203ENST00000380494 ICA1Q05084 483 aa18.28■□□□□ 0.52
COL4A3BP-203ENST00000380494 MFSD14BQ5SR56 506 aa18.28■□□□□ 0.52
COL4A3BP-203ENST00000380494 TTLL11Q8NHH1 800 aa18.28■□□□□ 0.52
COL4A3BP-203ENST00000380494 IL17RAQ96F46 866 aa18.28■□□□□ 0.52
COL4A3BP-203ENST00000380494 ING2Q9H160 280 aa18.28■□□□□ 0.52
COL4A3BP-203ENST00000380494 DNAJC12Q9UKB3 198 aa18.28■□□□□ 0.52
COL4A3BP-203ENST00000380494 TTLL1O95922 423 aa18.28■□□□□ 0.52
COL4A3BP-203ENST00000380494 SURF1Q15526 300 aa18.28■□□□□ 0.52
COL4A3BP-203ENST00000380494 EXOC8Q8IYI6 725 aa18.28■□□□□ 0.52
COL4A3BP-203ENST00000380494 BBS5Q8N3I7 341 aa18.28■□□□□ 0.52
COL4A3BP-203ENST00000380494 FAM8A1Q9UBU6 413 aa18.28■□□□□ 0.52
COL4A3BP-203ENST00000380494 CCPG1Q9ULG6 757 aa18.28■□□□□ 0.52
COL4A3BP-203ENST00000380494 PITPNM2Q9BZ72 1349 aa18.28■□□□□ 0.52
COL4A3BP-203ENST00000380494 NCK2O43639 380 aa18.28■□□□□ 0.52
COL4A3BP-203ENST00000380494 MOV10L1Q9BXT6 1211 aaKnown RBP18.28■□□□□ 0.52
COL4A3BP-203ENST00000380494 WARS2Q9UGM6 360 aaKnown RBP18.28■□□□□ 0.52
COL4A3BP-203ENST00000380494 LIMA1Q9UHB6 759 aaKnown RBP18.28■□□□□ 0.52
COL4A3BP-203ENST00000380494 USP15Q9Y4E8 981 aaPredicted RBP18.28■□□□□ 0.52
COL4A3BP-203ENST00000380494 ARHGDIAP52565 204 aa18.28■□□□□ 0.52
COL4A3BP-203ENST00000380494 SEC16BQ96JE7 1060 aa18.28■□□□□ 0.52
COL4A3BP-203ENST00000380494 MAP3K15Q6ZN16 1313 aa18.27■□□□□ 0.52
COL4A3BP-203ENST00000380494 TTC26A0AVF1 554 aa18.27■□□□□ 0.52
COL4A3BP-203ENST00000380494 LRRIQ4A6NIV6 560 aa18.27■□□□□ 0.52
COL4A3BP-203ENST00000380494 TLR3O15455 904 aaKnown RBP18.27■□□□□ 0.52
COL4A3BP-203ENST00000380494 LPXNO60711 386 aa18.27■□□□□ 0.52
COL4A3BP-203ENST00000380494 DIAPH2O60879 1101 aa18.27■□□□□ 0.52
COL4A3BP-203ENST00000380494 DDIT3P35638 169 aa18.27■□□□□ 0.52
COL4A3BP-203ENST00000380494 CACNB1Q02641 598 aaPredicted RBP18.27■□□□□ 0.52
COL4A3BP-203ENST00000380494 AP1B1Q10567 949 aa18.27■□□□□ 0.52
COL4A3BP-203ENST00000380494 CALN1Q9BXU9 219 aa18.27■□□□□ 0.52
COL4A3BP-203ENST00000380494 AS3MTQ9HBK9 375 aa18.27■□□□□ 0.52
COL4A3BP-203ENST00000380494 ANXA13P27216 316 aa18.27■□□□□ 0.52
COL4A3BP-203ENST00000380494 USP6NLQ92738 828 aa18.27■□□□□ 0.52
COL4A3BP-203ENST00000380494 ATP6V1E2Q96A05 226 aa18.27■□□□□ 0.52
COL4A3BP-203ENST00000380494 PRMT1Q99873 361 aaKnown RBP18.27■□□□□ 0.52
COL4A3BP-203ENST00000380494 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.27■□□□□ 0.52
COL4A3BP-203ENST00000380494 SMG5Q9UPR3 1016 aaKnown RBP18.27■□□□□ 0.52
COL4A3BP-203ENST00000380494 A0A1B0GTH6 734 aa18.27■□□□□ 0.52
COL4A3BP-203ENST00000380494 SYCE1LA8MT33 242 aa18.27■□□□□ 0.52
COL4A3BP-203ENST00000380494 MYBL1P10243 752 aa18.27■□□□□ 0.52
COL4A3BP-203ENST00000380494 HNRNPH1P31943 449 aaKnown RBP18.27■□□□□ 0.52
COL4A3BP-203ENST00000380494 NOP14P78316 857 aaKnown RBP18.27■□□□□ 0.52
COL4A3BP-203ENST00000380494 TCP10Q12799 353 aa18.27■□□□□ 0.52
COL4A3BP-203ENST00000380494 CRYMQ14894 314 aa18.27■□□□□ 0.52
COL4A3BP-203ENST00000380494 DNAL1Q4LDG9 190 aa18.27■□□□□ 0.52
COL4A3BP-203ENST00000380494 TMED8Q6PL24 325 aaPredicted RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms