RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 PODNQ7Z5L7 613 aa17.83■□□□□ 0.44
VPS16-203ENST00000380469 KIAA0825Q8IV33 1275 aa17.83■□□□□ 0.44
VPS16-203ENST00000380469 CD302Q8IX05 232 aa17.83■□□□□ 0.44
VPS16-203ENST00000380469 SEPT12Q8IYM1 358 aa17.83■□□□□ 0.44
VPS16-203ENST00000380469 LRRC57Q8N9N7 239 aa17.83■□□□□ 0.44
VPS16-203ENST00000380469 IDI2Q9BXS1 227 aa17.83■□□□□ 0.44
VPS16-203ENST00000380469 TAF1DQ9H5J8 278 aaPredicted RBP17.83■□□□□ 0.44
VPS16-203ENST00000380469 FAM198AQ9UFP1 575 aa17.83■□□□□ 0.44
VPS16-203ENST00000380469 PCDHB13Q9Y5F0 798 aa17.83■□□□□ 0.44
VPS16-203ENST00000380469 KIF13BQ9NQT8 1826 aa17.83■□□□□ 0.44
VPS16-203ENST00000380469 ATP8B3O60423 1300 aa17.83■□□□□ 0.44
VPS16-203ENST00000380469 GTPBP10A4D1E9 387 aaKnown RBP17.82■□□□□ 0.44
VPS16-203ENST00000380469 ZNF233A6NK53 670 aa17.82■□□□□ 0.44
VPS16-203ENST00000380469 UBAP1LF5GYI3 381 aa17.82■□□□□ 0.44
VPS16-203ENST00000380469 NDUFB10O96000 172 aa17.82■□□□□ 0.44
VPS16-203ENST00000380469 FERP16591 822 aa17.82■□□□□ 0.44
VPS16-203ENST00000380469 CASP4P49662 377 aa17.82■□□□□ 0.44
VPS16-203ENST00000380469 JAM2P57087 298 aa17.82■□□□□ 0.44
VPS16-203ENST00000380469 KCTD16Q68DU8 428 aa17.82■□□□□ 0.44
VPS16-203ENST00000380469 SYCE1Q8N0S2 351 aa17.82■□□□□ 0.44
VPS16-203ENST00000380469 EIF1ADQ8N9N8 165 aaKnown RBP17.82■□□□□ 0.44
VPS16-203ENST00000380469 TPCN2Q8NHX9 752 aa17.82■□□□□ 0.44
VPS16-203ENST00000380469 PPM1EQ8WY54 764 aa17.82■□□□□ 0.44
VPS16-203ENST00000380469 SLC35C1Q96A29 364 aa17.82■□□□□ 0.44
VPS16-203ENST00000380469 ISCUQ9H1K1 167 aa17.82■□□□□ 0.44
VPS16-203ENST00000380469 INTUQ9ULD6 942 aa17.82■□□□□ 0.44
VPS16-203ENST00000380469 GRIN2DO15399 1336 aa17.82■□□□□ 0.44
VPS16-203ENST00000380469 TMCO5BA8MYB1 307 aa17.82■□□□□ 0.44
VPS16-203ENST00000380469 FAM13AO94988 1023 aa17.82■□□□□ 0.44
VPS16-203ENST00000380469 BMP3P12645 472 aa17.82■□□□□ 0.44
VPS16-203ENST00000380469 HOXA13P31271 388 aaPredicted RBP17.82■□□□□ 0.44
VPS16-203ENST00000380469 CUL1Q13616 776 aa17.82■□□□□ 0.44
VPS16-203ENST00000380469 HLTFQ14527 1009 aaKnown RBP eCLIP17.82■□□□□ 0.44
VPS16-203ENST00000380469 TTC19Q6DKK2 380 aaPredicted RBP17.82■□□□□ 0.44
VPS16-203ENST00000380469 PEX26Q7Z412 305 aa17.82■□□□□ 0.44
VPS16-203ENST00000380469 SCFD2Q8WU76 684 aa17.82■□□□□ 0.44
VPS16-203ENST00000380469 CALR3Q96L12 384 aaKnown RBP17.82■□□□□ 0.44
VPS16-203ENST00000380469 DBNDD1Q9H9R9 158 aa17.82■□□□□ 0.44
VPS16-203ENST00000380469 SIX2Q9NPC8 291 aa17.82■□□□□ 0.44
VPS16-203ENST00000380469 OLFML3Q9NRN5 406 aa17.82■□□□□ 0.44
VPS16-203ENST00000380469 A0A0A6YYK5 440 aaPredicted RBP17.81■□□□□ 0.44
VPS16-203ENST00000380469 PGRMC1O00264 195 aaKnown RBP17.81■□□□□ 0.44
VPS16-203ENST00000380469 GDF11O95390 407 aa17.81■□□□□ 0.44
VPS16-203ENST00000380469 CYP3A4P08684 503 aa17.81■□□□□ 0.44
VPS16-203ENST00000380469 PSMC2P35998 433 aaKnown RBP17.81■□□□□ 0.44
VPS16-203ENST00000380469 STAT1P42224 750 aa17.81■□□□□ 0.44
VPS16-203ENST00000380469 RINT1Q6NUQ1 792 aa17.81■□□□□ 0.44
VPS16-203ENST00000380469 EFCAB13Q8IY85 973 aa17.81■□□□□ 0.44
VPS16-203ENST00000380469 POLD4Q9HCU8 107 aa17.81■□□□□ 0.44
VPS16-203ENST00000380469 RGL1Q9NZL6 768 aa17.81■□□□□ 0.44
VPS16-203ENST00000380469 PCDHAC2Q9Y5I4 1007 aa17.81■□□□□ 0.44
VPS16-203ENST00000380469 ANKRD65E5RJM6 399 aa17.81■□□□□ 0.44
VPS16-203ENST00000380469 EIF3DO15371 548 aaKnown RBP eCLIP17.81■□□□□ 0.44
VPS16-203ENST00000380469 HDLBPQ00341 1268 aaKnown RBP17.81■□□□□ 0.44
VPS16-203ENST00000380469 MEX3CQ5U5Q3 659 aaKnown RBP17.81■□□□□ 0.44
VPS16-203ENST00000380469 SH3BP5LQ7L8J4 393 aa17.81■□□□□ 0.44
VPS16-203ENST00000380469 SH2D3CQ8N5H7 860 aa17.81■□□□□ 0.44
VPS16-203ENST00000380469 MYCT1Q8N699 235 aa17.81■□□□□ 0.44
VPS16-203ENST00000380469 PIK3R5Q8WYR1 880 aa17.81■□□□□ 0.44
VPS16-203ENST00000380469 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.81■□□□□ 0.441e-6■■□□□ 12.7
VPS16-203ENST00000380469 GOLPH3Q9H4A6 298 aa17.81■□□□□ 0.44
VPS16-203ENST00000380469 KCNQ5Q9NR82 932 aa17.81■□□□□ 0.44
VPS16-203ENST00000380469 SPATA31A6Q5VVP1 1343 aa17.8■□□□□ 0.44
VPS16-203ENST00000380469 SFI1A8K8P3 1242 aa17.8■□□□□ 0.44
VPS16-203ENST00000380469 EML1O00423 815 aa17.8■□□□□ 0.44
VPS16-203ENST00000380469 ONECUT3O60422 494 aaPredicted RBP17.8■□□□□ 0.44
VPS16-203ENST00000380469 HSPA9P38646 679 aaKnown RBP17.8■□□□□ 0.44
VPS16-203ENST00000380469 TRADDQ15628 312 aa17.8■□□□□ 0.44
VPS16-203ENST00000380469 KDM7AQ6ZMT4 941 aa17.8■□□□□ 0.44
VPS16-203ENST00000380469 FAM186BQ8IYM0 893 aa17.8■□□□□ 0.44
VPS16-203ENST00000380469 CYP2W1Q8TAV3 490 aa17.8■□□□□ 0.44
VPS16-203ENST00000380469 U2AF1L4Q8WU68 220 aaKnown RBP17.8■□□□□ 0.44
VPS16-203ENST00000380469 GOLGA6L10A6NI86 522 aa17.8■□□□□ 0.44
VPS16-203ENST00000380469 NPM3O75607 178 aaKnown RBP17.8■□□□□ 0.44
VPS16-203ENST00000380469 GFPT2O94808 682 aa17.8■□□□□ 0.44
VPS16-203ENST00000380469 PDE6BP35913 854 aa17.8■□□□□ 0.44
VPS16-203ENST00000380469 NPEPPSP55786 919 aa17.8■□□□□ 0.44
VPS16-203ENST00000380469 KCNA1Q09470 495 aa17.8■□□□□ 0.44
VPS16-203ENST00000380469 MAATS1Q7Z4T9 603 aa17.8■□□□□ 0.44
VPS16-203ENST00000380469 DNAAF5Q86Y56 855 aa17.8■□□□□ 0.44
VPS16-203ENST00000380469 TPH2Q8IWU9 490 aa17.8■□□□□ 0.44
VPS16-203ENST00000380469 METTL13Q8N6R0 699 aa17.8■□□□□ 0.44
VPS16-203ENST00000380469 C1orf131Q8NDD1 294 aaKnown RBP17.8■□□□□ 0.44
VPS16-203ENST00000380469 PIGOQ8TEQ8 1089 aa17.8■□□□□ 0.44
VPS16-203ENST00000380469 TUFT1Q9NNX1 390 aa17.8■□□□□ 0.44
VPS16-203ENST00000380469 SUCLA2Q9P2R7 463 aaPredicted RBP17.8■□□□□ 0.44
VPS16-203ENST00000380469 AJAP1Q9UKB5 411 aaPredicted RBP17.8■□□□□ 0.44
VPS16-203ENST00000380469 NENFQ9UMX5 172 aa17.8■□□□□ 0.44
VPS16-203ENST00000380469 CCDC188H7C350 402 aa17.79■□□□□ 0.44
VPS16-203ENST00000380469 KRIT1O00522 736 aa17.79■□□□□ 0.44
VPS16-203ENST00000380469 TGFB1I1O43294 461 aa17.79■□□□□ 0.44
VPS16-203ENST00000380469 ATP1A2P50993 1020 aa17.79■□□□□ 0.44
VPS16-203ENST00000380469 TRAF1Q13077 416 aa17.79■□□□□ 0.44
VPS16-203ENST00000380469 PDCLQ13371 301 aa17.79■□□□□ 0.44
VPS16-203ENST00000380469 CTTNQ14247 550 aaKnown RBP17.79■□□□□ 0.44
VPS16-203ENST00000380469 RBM26Q5T8P6 1007 aaKnown RBP17.79■□□□□ 0.44
VPS16-203ENST00000380469 STRIP1Q5VSL9 837 aa17.79■□□□□ 0.44
VPS16-203ENST00000380469 GJB7Q6PEY0 223 aa17.79■□□□□ 0.44
VPS16-203ENST00000380469 BTNL9Q6UXG8 535 aa17.79■□□□□ 0.44
VPS16-203ENST00000380469 SLFN11Q7Z7L1 901 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms