RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 CEBPAP49715 358 aaPredicted RBP11.79□□□□□ -0.52
USP6NL-202ENST00000379237 FAM83BQ5T0W9 1011 aa11.79□□□□□ -0.52
USP6NL-202ENST00000379237 PDXDC1Q6P996 788 aa11.79□□□□□ -0.52
USP6NL-202ENST00000379237 GRAMD1AQ96CP6 724 aa11.79□□□□□ -0.52
USP6NL-202ENST00000379237 DDX18Q9NVP1 670 aaKnown RBP11.79□□□□□ -0.52
USP6NL-202ENST00000379237 NDE1Q9NXR1 346 aa11.79□□□□□ -0.52
USP6NL-202ENST00000379237 WDR17Q8IZU2 1322 aa11.79□□□□□ -0.52
USP6NL-202ENST00000379237 SPOPO43791 374 aa11.79□□□□□ -0.52
USP6NL-202ENST00000379237 IGKV5-2P06315 115 aa11.79□□□□□ -0.52
USP6NL-202ENST00000379237 FECHP22830 423 aa11.79□□□□□ -0.52
USP6NL-202ENST00000379237 HOXC9P31274 260 aa11.79□□□□□ -0.52
USP6NL-202ENST00000379237 CBX3Q13185 183 aa11.79□□□□□ -0.52
USP6NL-202ENST00000379237 LRRC41Q15345 812 aa11.79□□□□□ -0.52
USP6NL-202ENST00000379237 BARGINQ6ZT62 677 aa11.79□□□□□ -0.52
USP6NL-202ENST00000379237 RAB34Q9BZG1 259 aa11.79□□□□□ -0.52
USP6NL-202ENST00000379237 LY9Q9HBG7 655 aa11.79□□□□□ -0.52
USP6NL-202ENST00000379237 ZMYND8Q9ULU4 1186 aaPredicted RBP11.79□□□□□ -0.52
USP6NL-202ENST00000379237 PP2D1A8MPX8 630 aa11.79□□□□□ -0.52
USP6NL-202ENST00000379237 POC1B-GALNT4F8VUJ3 575 aa11.79□□□□□ -0.52
USP6NL-202ENST00000379237 ITGA4P13612 1032 aa11.79□□□□□ -0.52
USP6NL-202ENST00000379237 MKRN3Q13064 507 aaKnown RBP11.79□□□□□ -0.52
USP6NL-202ENST00000379237 NAB2Q15742 525 aa11.79□□□□□ -0.52
USP6NL-202ENST00000379237 GSTA5Q7RTV2 222 aa11.79□□□□□ -0.52
USP6NL-202ENST00000379237 NANOGNBQ7Z5D8 188 aa11.79□□□□□ -0.52
USP6NL-202ENST00000379237 RASSF3Q86WH2 238 aa11.79□□□□□ -0.52
USP6NL-202ENST00000379237 TMEM60Q9H2L4 133 aa11.79□□□□□ -0.52
USP6NL-202ENST00000379237 NMRK1Q9NWW6 199 aa11.79□□□□□ -0.52
USP6NL-202ENST00000379237 STK36Q9NRP7 1315 aa11.79□□□□□ -0.52
USP6NL-202ENST00000379237 PDE5AO76074 875 aa11.78□□□□□ -0.52
USP6NL-202ENST00000379237 UNC5CO95185 931 aa11.78□□□□□ -0.52
USP6NL-202ENST00000379237 VIL1P09327 827 aaKnown RBP11.78□□□□□ -0.52
USP6NL-202ENST00000379237 SERPINB6P35237 376 aa11.78□□□□□ -0.52
USP6NL-202ENST00000379237 LIFRP42702 1097 aa11.78□□□□□ -0.52
USP6NL-202ENST00000379237 CCDC80Q76M96 950 aa11.78□□□□□ -0.52
USP6NL-202ENST00000379237 GLG1Q92896 1179 aa11.78□□□□□ -0.52
USP6NL-202ENST00000379237 PCMTD2Q9NV79 361 aa11.78□□□□□ -0.52
USP6NL-202ENST00000379237 USP40Q9NVE5 1235 aa11.78□□□□□ -0.52
USP6NL-202ENST00000379237 NKX1-2Q9UD57 310 aaPredicted RBP11.78□□□□□ -0.52
USP6NL-202ENST00000379237 TET3O43151 1660 aa11.78□□□□□ -0.52
USP6NL-202ENST00000379237 TRPA1O75762 1119 aa11.78□□□□□ -0.52
USP6NL-202ENST00000379237 ADARP55265 1226 aaKnown RBP11.78□□□□□ -0.52
USP6NL-202ENST00000379237 CYP4F22Q6NT55 531 aa11.78□□□□□ -0.52
USP6NL-202ENST00000379237 ZNF662Q6ZS27 426 aa11.78□□□□□ -0.52
USP6NL-202ENST00000379237 CATSPER2Q96P56 530 aa11.78□□□□□ -0.52
USP6NL-202ENST00000379237 PLVAPQ9BX97 442 aa11.78□□□□□ -0.52
USP6NL-202ENST00000379237 CD163L1Q9NR16 1453 aa11.78□□□□□ -0.52
USP6NL-202ENST00000379237 RBM47A0AV96 593 aaKnown RBP11.78□□□□□ -0.52
USP6NL-202ENST00000379237 RASA4BC9J798 803 aa11.78□□□□□ -0.52
USP6NL-202ENST00000379237 ZNF263O14978 683 aa11.78□□□□□ -0.52
USP6NL-202ENST00000379237 RASA4O43374 803 aa11.78□□□□□ -0.52
USP6NL-202ENST00000379237 RAD21O60216 631 aa11.78□□□□□ -0.52
USP6NL-202ENST00000379237 PSMD7P51665 324 aa11.78□□□□□ -0.52
USP6NL-202ENST00000379237 BNIP1Q12981 228 aa11.78□□□□□ -0.52
USP6NL-202ENST00000379237 UAP1Q16222 522 aaPredicted RBP11.78□□□□□ -0.52
USP6NL-202ENST00000379237 MIER3Q7Z3K6 550 aa11.78□□□□□ -0.52
USP6NL-202ENST00000379237 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.78□□□□□ -0.52
USP6NL-202ENST00000379237 METTL13Q8N6R0 699 aa11.78□□□□□ -0.52
USP6NL-202ENST00000379237 LZICQ8WZA0 190 aa11.78□□□□□ -0.52
USP6NL-202ENST00000379237 HPS3Q969F9 1004 aa11.78□□□□□ -0.52
USP6NL-202ENST00000379237 RNF26Q9BY78 433 aaPredicted RBP11.78□□□□□ -0.52
USP6NL-202ENST00000379237 ATP6V0A2Q9Y487 856 aa11.78□□□□□ -0.52
USP6NL-202ENST00000379237 PXDNLA1KZ92 1463 aa11.78□□□□□ -0.52
USP6NL-202ENST00000379237 OVOS2A0A0G2JMS6 1433 aa11.78□□□□□ -0.52
USP6NL-202ENST00000379237 CPDO75976 1380 aa11.78□□□□□ -0.52
USP6NL-202ENST00000379237 ADCY3O60266 1144 aa11.78□□□□□ -0.52
USP6NL-202ENST00000379237 FCER1AP12319 257 aa11.78□□□□□ -0.52
USP6NL-202ENST00000379237 PLCG2P16885 1265 aa11.78□□□□□ -0.52
USP6NL-202ENST00000379237 CA4P22748 312 aa11.78□□□□□ -0.52
USP6NL-202ENST00000379237 DNAJC3Q13217 504 aa11.78□□□□□ -0.52
USP6NL-202ENST00000379237 MED21Q13503 144 aa11.78□□□□□ -0.52
USP6NL-202ENST00000379237 R3HDM1Q15032 1099 aaKnown RBP11.78□□□□□ -0.52
USP6NL-202ENST00000379237 GRAMD1BQ3KR37 738 aa11.78□□□□□ -0.52
USP6NL-202ENST00000379237 EPM2AIP1Q7L775 607 aaPredicted RBP11.78□□□□□ -0.52
USP6NL-202ENST00000379237 COL23A1Q86Y22 540 aaPredicted RBP11.78□□□□□ -0.52
USP6NL-202ENST00000379237 SYT2Q8N9I0 419 aaPredicted RBP11.78□□□□□ -0.52
USP6NL-202ENST00000379237 RASGRP4Q8TDF6 673 aa11.78□□□□□ -0.52
USP6NL-202ENST00000379237 RABGAP1Q9Y3P9 1069 aa11.78□□□□□ -0.52
USP6NL-202ENST00000379237 A0A1W2PQJ5 194 aa11.77□□□□□ -0.52
USP6NL-202ENST00000379237 SSU72P8A0A1W2PR75 194 aa11.77□□□□□ -0.52
USP6NL-202ENST00000379237 RNMTO43148 476 aaKnown RBP11.77□□□□□ -0.52
USP6NL-202ENST00000379237 HAUS5O94927 633 aa11.77□□□□□ -0.52
USP6NL-202ENST00000379237 CBX6O95503 412 aa11.77□□□□□ -0.52
USP6NL-202ENST00000379237 CCNFP41002 786 aa11.77□□□□□ -0.52
USP6NL-202ENST00000379237 TMED10P49755 219 aaKnown RBP11.77□□□□□ -0.52
USP6NL-202ENST00000379237 TUBP50607 506 aa11.77□□□□□ -0.52
USP6NL-202ENST00000379237 SLC4A8Q2Y0W8 1093 aa11.77□□□□□ -0.52
USP6NL-202ENST00000379237 KIAA1755Q5JYT7 1200 aa11.77□□□□□ -0.52
USP6NL-202ENST00000379237 KLC3Q6P597 504 aa11.77□□□□□ -0.52
USP6NL-202ENST00000379237 LRRC74BQ6ZQY2 392 aa11.77□□□□□ -0.52
USP6NL-202ENST00000379237 FITM2Q8N6M3 262 aa11.77□□□□□ -0.52
USP6NL-202ENST00000379237 HIPK4Q8NE63 616 aa11.77□□□□□ -0.52
USP6NL-202ENST00000379237 LRRC59Q96AG4 307 aaKnown RBP11.77□□□□□ -0.52
USP6NL-202ENST00000379237 NR1H4Q96RI1 486 aaPredicted RBP11.77□□□□□ -0.52
USP6NL-202ENST00000379237 PUS3Q9BZE2 481 aaKnown RBP11.77□□□□□ -0.52
USP6NL-202ENST00000379237 TRAF3IP3Q9Y228 551 aa11.77□□□□□ -0.52
USP6NL-202ENST00000379237 IGSF1Q8N6C5 1336 aa11.77□□□□□ -0.53
USP6NL-202ENST00000379237 SPAG7O75391 227 aa11.77□□□□□ -0.53
USP6NL-202ENST00000379237 PAEPP09466 180 aa11.77□□□□□ -0.53
USP6NL-202ENST00000379237 TCIRG1Q13488 830 aa11.77□□□□□ -0.53
USP6NL-202ENST00000379237 THOC5Q13769 683 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms