RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 SUFUQ9UMX1 484 aa8.09□□□□□ -1.11
GPCPD1-201ENST00000379019 FRYLO94915 3013 aa8.09□□□□□ -1.12
GPCPD1-201ENST00000379019 CBFA2T2O43439 604 aa8.09□□□□□ -1.12
GPCPD1-201ENST00000379019 CHRNB2P17787 502 aa8.09□□□□□ -1.12
GPCPD1-201ENST00000379019 WHAMMP3Q1A5X7 153 aa8.09□□□□□ -1.12
GPCPD1-201ENST00000379019 SWT1Q5T5J6 900 aaKnown RBP8.09□□□□□ -1.12
GPCPD1-201ENST00000379019 PPFIBP1Q86W92 1011 aa8.09□□□□□ -1.12
GPCPD1-201ENST00000379019 CEP112Q8N8E3 955 aa8.09□□□□□ -1.12
GPCPD1-201ENST00000379019 UTP4Q969X6 686 aaKnown RBP8.09□□□□□ -1.12
GPCPD1-201ENST00000379019 TMEM87BQ96K49 555 aa8.09□□□□□ -1.12
GPCPD1-201ENST00000379019 ZNF570Q96NI8 536 aa8.09□□□□□ -1.12
GPCPD1-201ENST00000379019 PARK7Q99497 189 aaKnown RBP8.09□□□□□ -1.12
GPCPD1-201ENST00000379019 TRIM51Q9BSJ1 452 aa8.09□□□□□ -1.12
GPCPD1-201ENST00000379019 PANK4Q9NVE7 773 aa8.09□□□□□ -1.12
GPCPD1-201ENST00000379019 ROBO3Q96MS0 1386 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 HSD17B3P37058 310 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 CCDC178Q5BJE1 867 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 USP17L2Q6R6M4 530 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 GLG1Q92896 1179 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 STAMBPL1Q96FJ0 436 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 ZNF408Q9H9D4 720 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 SLC40A1Q9NP59 571 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 FAM198AQ9UFP1 575 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 MCM8Q9UJA3 840 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 TMEM59LQ9UK28 342 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 ASNSP08243 561 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 CYP7A1P22680 504 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 TBC1D8BQ0IIM8 1120 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 KIF22Q14807 665 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 PTGISQ16647 500 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 CCDC38Q502W7 563 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 LLGL2Q6P1M3 1020 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 ANKS1BQ7Z6G8 1248 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 UBA5Q9GZZ9 404 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 DCP1AQ9NPI6 582 aaPredicted RBP8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.08□□□□□ -1.121e-6■■■■□ 22.4
GPCPD1-201ENST00000379019 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 CTNNAL1Q9UBT7 734 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 ADAMTS1Q9UHI8 967 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 SMAPO00193 183 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 FKTNO75072 461 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 SLC9A1P19634 815 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 HOXD10P28358 340 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 POU5F1Q01860 360 aaKnown RBP8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 IFNL1Q8IU54 200 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 GDF3Q9NR23 364 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 AMACRQ9UHK6 382 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 MGAMO43451 1857 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 MYPNQ86TC9 1320 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 EGFRP00533 1210 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 GCLCP48506 637 aaPredicted RBP8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 EHHADHQ08426 723 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 SNX1Q13596 522 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 FREM2Q5SZK8 3169 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 TMEM63BQ5T3F8 832 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 MCTP2Q6DN12 878 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 CYP4F22Q6NT55 531 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 TMTC1Q8IUR5 882 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 KLHL7Q8IXQ5 586 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 ELOA2Q8IYF1 753 aaPredicted RBP8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 FUKQ8N0W3 1084 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 RNF186Q9NXI6 227 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 CHD7Q9P2D1 2997 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 FAM184BQ9ULE4 1060 aa8.08□□□□□ -1.12
GPCPD1-201ENST00000379019 TCP10L2B9ZVM9 353 aa8.07□□□□□ -1.12
GPCPD1-201ENST00000379019 O00370 1275 aa8.07□□□□□ -1.12
GPCPD1-201ENST00000379019 ALX1Q15699 326 aa8.07□□□□□ -1.12
GPCPD1-201ENST00000379019 ZNF572Q7Z3I7 529 aaPredicted RBP8.07□□□□□ -1.12
GPCPD1-201ENST00000379019 CTU1Q7Z7A3 348 aaKnown RBP8.07□□□□□ -1.12
GPCPD1-201ENST00000379019 SLC17A8Q8NDX2 589 aa8.07□□□□□ -1.12
GPCPD1-201ENST00000379019 C12orf42Q96LP6 360 aa8.07□□□□□ -1.12
GPCPD1-201ENST00000379019 NACAP1Q9BZK3 213 aa8.07□□□□□ -1.12
GPCPD1-201ENST00000379019 ABCF3Q9NUQ8 709 aa8.07□□□□□ -1.12
GPCPD1-201ENST00000379019 CLRN2A0PK11 232 aa8.07□□□□□ -1.12
GPCPD1-201ENST00000379019 RRAGAQ7L523 313 aa8.07□□□□□ -1.12
GPCPD1-201ENST00000379019 CNGA4Q8IV77 575 aa8.07□□□□□ -1.12
GPCPD1-201ENST00000379019 NUP58Q9BVL2 599 aa8.07□□□□□ -1.12
GPCPD1-201ENST00000379019 PCDHA2Q9Y5H9 948 aa8.07□□□□□ -1.12
GPCPD1-201ENST00000379019 OSBPP22059 807 aa8.07□□□□□ -1.12
GPCPD1-201ENST00000379019 NBPF12Q5TAG4 269 aaPredicted RBP8.07□□□□□ -1.12
GPCPD1-201ENST00000379019 ZNF571Q7Z3V5 609 aaPredicted RBP8.07□□□□□ -1.12
GPCPD1-201ENST00000379019 SPOCK2Q92563 424 aa8.07□□□□□ -1.12
GPCPD1-201ENST00000379019 VIPAS39Q9H9C1 493 aa8.07□□□□□ -1.12
GPCPD1-201ENST00000379019 TISP43B9A030 160 aa8.07□□□□□ -1.12
GPCPD1-201ENST00000379019 EVI5O60447 810 aa8.07□□□□□ -1.12
GPCPD1-201ENST00000379019 RHOBTB3O94955 611 aa8.07□□□□□ -1.12
GPCPD1-201ENST00000379019 HEXIM1O94992 359 aaKnown RBP8.07□□□□□ -1.12
GPCPD1-201ENST00000379019 CASP4P49662 377 aa8.07□□□□□ -1.12
GPCPD1-201ENST00000379019 RNF25Q96BH1 459 aaPredicted RBP8.07□□□□□ -1.12
GPCPD1-201ENST00000379019 CSRNP1Q96S65 589 aa8.07□□□□□ -1.12
GPCPD1-201ENST00000379019 COG5Q9UP83 839 aa8.07□□□□□ -1.12
GPCPD1-201ENST00000379019 A0A0G2JLL6 359 aaPredicted RBP8.06□□□□□ -1.12
GPCPD1-201ENST00000379019 USP17L5A8MUK1 530 aa8.06□□□□□ -1.12
GPCPD1-201ENST00000379019 CAND2O75155 1236 aa8.06□□□□□ -1.12
GPCPD1-201ENST00000379019 FGRP09769 529 aa8.06□□□□□ -1.12
GPCPD1-201ENST00000379019 SKOR1P84550 965 aa8.06□□□□□ -1.12
GPCPD1-201ENST00000379019 SGSM1Q2NKQ1 1148 aa8.06□□□□□ -1.12
GPCPD1-201ENST00000379019 ZCWPW2Q504Y3 356 aa8.06□□□□□ -1.12
GPCPD1-201ENST00000379019 LEKR1Q6ZMV7 388 aa8.06□□□□□ -1.12
GPCPD1-201ENST00000379019 PRRT2Q7Z6L0 340 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms