RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 HINFPQ9BQA5 517 aa8.92□□□□□ -0.98
PTPRR-203ENST00000378778 NLRC4Q9NPP4 1024 aa8.92□□□□□ -0.98
PTPRR-203ENST00000378778 ADAMTS1Q9UHI8 967 aa8.92□□□□□ -0.98
PTPRR-203ENST00000378778 USP15Q9Y4E8 981 aaPredicted RBP8.92□□□□□ -0.98
PTPRR-203ENST00000378778 ANKRD33BA6NCL7 494 aa8.91□□□□□ -0.98
PTPRR-203ENST00000378778 PHF20L1A8MW92 1017 aa8.91□□□□□ -0.98
PTPRR-203ENST00000378778 MIF4GDA9UHW6 222 aaKnown RBP8.91□□□□□ -0.98
PTPRR-203ENST00000378778 ANP32DO95626 131 aa8.91□□□□□ -0.98
PTPRR-203ENST00000378778 CHRNA3P32297 505 aa8.91□□□□□ -0.98
PTPRR-203ENST00000378778 SARNPP82979 210 aaKnown RBP8.91□□□□□ -0.98
PTPRR-203ENST00000378778 ATP11AP98196 1134 aa8.91□□□□□ -0.98
PTPRR-203ENST00000378778 COASYQ13057 564 aa8.91□□□□□ -0.98
PTPRR-203ENST00000378778 PPP2R5AQ15172 486 aa8.91□□□□□ -0.98
PTPRR-203ENST00000378778 BZW1Q7L1Q6 419 aaKnown RBP8.91□□□□□ -0.98
PTPRR-203ENST00000378778 FBXO33Q7Z6M2 555 aa8.91□□□□□ -0.98
PTPRR-203ENST00000378778 NT5DC3Q86UY8 548 aa8.91□□□□□ -0.98
PTPRR-203ENST00000378778 REXO1Q8N1G1 1221 aaKnown RBP8.91□□□□□ -0.98
PTPRR-203ENST00000378778 GPKOWQ92917 476 aaPredicted RBP eCLIP8.91□□□□□ -0.98
PTPRR-203ENST00000378778 GLT8D2Q9H1C3 349 aa8.91□□□□□ -0.98
PTPRR-203ENST00000378778 ZDHHC18Q9NUE0 388 aa8.91□□□□□ -0.98
PTPRR-203ENST00000378778 ABCF2Q9UG63 623 aa8.91□□□□□ -0.98
PTPRR-203ENST00000378778 SEC63Q9UGP8 760 aaKnown RBP8.91□□□□□ -0.98
PTPRR-203ENST00000378778 NAV1Q8NEY1 1877 aa8.91□□□□□ -0.98
PTPRR-203ENST00000378778 SNX3O60493 162 aa8.91□□□□□ -0.98
PTPRR-203ENST00000378778 SMNDC1O75940 238 aaKnown RBP eCLIP8.91□□□□□ -0.98
PTPRR-203ENST00000378778 GJB6O95452 261 aa8.91□□□□□ -0.98
PTPRR-203ENST00000378778 TMEM253P0C7T8 217 aa8.91□□□□□ -0.98
PTPRR-203ENST00000378778 TECP42680 631 aa8.91□□□□□ -0.98
PTPRR-203ENST00000378778 BNIP1Q12981 228 aa8.91□□□□□ -0.98
PTPRR-203ENST00000378778 ACVR2BQ13705 512 aa8.91□□□□□ -0.98
PTPRR-203ENST00000378778 BLMHQ13867 455 aa8.91□□□□□ -0.98
PTPRR-203ENST00000378778 E2F5Q15329 346 aa8.91□□□□□ -0.98
PTPRR-203ENST00000378778 CHRNA2Q15822 529 aa8.91□□□□□ -0.98
PTPRR-203ENST00000378778 LETM2Q2VYF4 491 aa8.91□□□□□ -0.98
PTPRR-203ENST00000378778 C12orf60Q5U649 245 aa8.91□□□□□ -0.98
PTPRR-203ENST00000378778 TRMT10CQ7L0Y3 403 aaKnown RBP8.91□□□□□ -0.98
PTPRR-203ENST00000378778 CYFIP1Q7L576 1253 aa8.91□□□□□ -0.98
PTPRR-203ENST00000378778 DDX12PQ92771 950 aa8.91□□□□□ -0.98
PTPRR-203ENST00000378778 DNAJC19Q96DA6 116 aa8.91□□□□□ -0.98
PTPRR-203ENST00000378778 NEUROG2Q9H2A3 272 aa8.91□□□□□ -0.98
PTPRR-203ENST00000378778 MKNK2Q9HBH9 465 aa8.91□□□□□ -0.98
PTPRR-203ENST00000378778 ARHGEF3Q9NR81 526 aa8.91□□□□□ -0.98
PTPRR-203ENST00000378778 BSDC1Q9NW68 430 aaPredicted RBP8.91□□□□□ -0.98
PTPRR-203ENST00000378778 TRAF3IP3Q9Y228 551 aa8.91□□□□□ -0.98
PTPRR-203ENST00000378778 ARL2BPQ9Y2Y0 163 aa8.91□□□□□ -0.98
PTPRR-203ENST00000378778 ZNF330Q9Y3S2 320 aaPredicted RBP8.91□□□□□ -0.98
PTPRR-203ENST00000378778 PFASO15067 1338 aa8.9□□□□□ -0.98
PTPRR-203ENST00000378778 SYNGAP1Q96PV0 1343 aa8.9□□□□□ -0.98
PTPRR-203ENST00000378778 FRMD3A2A2Y4 597 aa8.9□□□□□ -0.98
PTPRR-203ENST00000378778 KLHL33A6NCF5 533 aa8.9□□□□□ -0.98
PTPRR-203ENST00000378778 SMCO2A6NFE2 343 aa8.9□□□□□ -0.98
PTPRR-203ENST00000378778 AHCYL1O43865 530 aa8.9□□□□□ -0.98
PTPRR-203ENST00000378778 AFPP02771 609 aaKnown RBP8.9□□□□□ -0.98
PTPRR-203ENST00000378778 RFX1P22670 979 aa8.9□□□□□ -0.98
PTPRR-203ENST00000378778 PAX7P23759 505 aa8.9□□□□□ -0.98
PTPRR-203ENST00000378778 COPS2P61201 443 aa8.9□□□□□ -0.98
PTPRR-203ENST00000378778 DYNLL1P63167 89 aaKnown RBP8.9□□□□□ -0.98
PTPRR-203ENST00000378778 DR1Q01658 176 aa8.9□□□□□ -0.98
PTPRR-203ENST00000378778 NFIL3Q16649 462 aa8.9□□□□□ -0.98
PTPRR-203ENST00000378778 SPRED3Q2MJR0 410 aa8.9□□□□□ -0.98
PTPRR-203ENST00000378778 PARP6Q2NL67 630 aa8.9□□□□□ -0.98
PTPRR-203ENST00000378778 CAPRIN2Q6IMN6 1127 aaKnown RBP8.9□□□□□ -0.98
PTPRR-203ENST00000378778 ATP8B4Q8TF62 1192 aa8.9□□□□□ -0.98
PTPRR-203ENST00000378778 RFFLQ8WZ73 363 aa8.9□□□□□ -0.98
PTPRR-203ENST00000378778 PIGBQ92521 554 aa8.9□□□□□ -0.98
PTPRR-203ENST00000378778 PLIN2Q99541 437 aa8.9□□□□□ -0.98
PTPRR-203ENST00000378778 DDX47Q9H0S4 455 aaKnown RBP8.9□□□□□ -0.98
PTPRR-203ENST00000378778 PANK4Q9NVE7 773 aa8.9□□□□□ -0.98
PTPRR-203ENST00000378778 PCYOX1Q9UHG3 505 aa8.9□□□□□ -0.98
PTPRR-203ENST00000378778 SLIT2O94813 1529 aa8.9□□□□□ -0.98
PTPRR-203ENST00000378778 RARGP13631 454 aa8.9□□□□□ -0.98
PTPRR-203ENST00000378778 BRD2P25440 801 aaKnown RBP8.9□□□□□ -0.98
PTPRR-203ENST00000378778 RPL13P26373 211 aaKnown RBP8.9□□□□□ -0.98
PTPRR-203ENST00000378778 RWDD2BP57060 319 aa8.9□□□□□ -0.98
PTPRR-203ENST00000378778 JAM2P57087 298 aa8.9□□□□□ -0.98
PTPRR-203ENST00000378778 NCALDP61601 193 aa8.9□□□□□ -0.98
PTPRR-203ENST00000378778 TFAP4Q01664 338 aa8.9□□□□□ -0.98
PTPRR-203ENST00000378778 PTK2Q05397 1052 aa8.9□□□□□ -0.98
PTPRR-203ENST00000378778 KLRC3Q07444 240 aa8.9□□□□□ -0.98
PTPRR-203ENST00000378778 MYO1EQ12965 1108 aa8.9□□□□□ -0.98
PTPRR-203ENST00000378778 RBBP5Q15291 538 aaKnown RBP8.9□□□□□ -0.98
PTPRR-203ENST00000378778 KIAA1755Q5JYT7 1200 aa8.9□□□□□ -0.98
PTPRR-203ENST00000378778 RNF43Q68DV7 783 aa8.9□□□□□ -0.98
PTPRR-203ENST00000378778 FAM133AQ8N9E0 248 aa8.9□□□□□ -0.98
PTPRR-203ENST00000378778 OR2W6PQ8NHA6 318 aa8.9□□□□□ -0.98
PTPRR-203ENST00000378778 RASGRP4Q8TDF6 673 aa8.9□□□□□ -0.98
PTPRR-203ENST00000378778 SERPINB12Q96P63 405 aa8.9□□□□□ -0.98
PTPRR-203ENST00000378778 KCTD10Q9H3F6 313 aa8.9□□□□□ -0.98
PTPRR-203ENST00000378778 RXFP1Q9HBX9 757 aa8.9□□□□□ -0.98
PTPRR-203ENST00000378778 USP40Q9NVE5 1235 aa8.9□□□□□ -0.98
PTPRR-203ENST00000378778 SLC5A4Q9NY91 659 aa8.9□□□□□ -0.98
PTPRR-203ENST00000378778 TTI1O43156 1089 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 CALUO43852 315 aaPredicted RBP8.89□□□□□ -0.99
PTPRR-203ENST00000378778 HNRNPCL1O60812 293 aaKnown RBP8.89□□□□□ -0.99
PTPRR-203ENST00000378778 PHF2O75151 1096 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 CAND2O75155 1236 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 TCEA3O75764 348 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 SSBP05455 408 aaKnown RBP eCLIP8.89□□□□□ -0.99
PTPRR-203ENST00000378778 FESP07332 822 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 VIMP08670 466 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms