RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 STAM2O75886 525 aa21.4■■□□□ 1.02
SSU72-204ENST00000378726 GCNT3O95395 438 aa21.4■■□□□ 1.02
SSU72-204ENST00000378726 PPP2R3AQ06190 1150 aa21.4■■□□□ 1.02
SSU72-204ENST00000378726 MOGSQ13724 837 aa21.4■■□□□ 1.02
SSU72-204ENST00000378726 KNOP1Q1ED39 458 aaKnown RBP21.4■■□□□ 1.02
SSU72-204ENST00000378726 VWA3BQ502W6 1294 aa21.4■■□□□ 1.02
SSU72-204ENST00000378726 DNERQ8NFT8 737 aa21.4■■□□□ 1.02
SSU72-204ENST00000378726 SLC10A4Q96EP9 437 aa21.4■■□□□ 1.02
SSU72-204ENST00000378726 HOXD13P35453 343 aa21.39■■□□□ 1.01
SSU72-204ENST00000378726 ADAM9Q13443 819 aa21.39■■□□□ 1.01
SSU72-204ENST00000378726 MAP1SQ66K74 1059 aaPredicted RBP21.39■■□□□ 1.01
SSU72-204ENST00000378726 PADI6Q6TGC4 694 aa21.39■■□□□ 1.01
SSU72-204ENST00000378726 CDHR1Q96JP9 859 aa21.39■■□□□ 1.01
SSU72-204ENST00000378726 CEP63Q96MT8 703 aa21.39■■□□□ 1.01
SSU72-204ENST00000378726 ZNF408Q9H9D4 720 aa21.39■■□□□ 1.01
SSU72-204ENST00000378726 LYPLA2O95372 231 aa21.39■■□□□ 1.01
SSU72-204ENST00000378726 KCNA2P16389 499 aa21.39■■□□□ 1.01
SSU72-204ENST00000378726 STXBP2Q15833 593 aa21.39■■□□□ 1.01
SSU72-204ENST00000378726 MAN2A1Q16706 1144 aa21.39■■□□□ 1.01
SSU72-204ENST00000378726 GNPTABQ3T906 1256 aa21.39■■□□□ 1.01
SSU72-204ENST00000378726 TEX35Q5T0J7 233 aa21.39■■□□□ 1.01
SSU72-204ENST00000378726 FKBP15Q5T1M5 1219 aa21.39■■□□□ 1.01
SSU72-204ENST00000378726 ZNF746Q6NUN9 644 aaPredicted RBP21.39■■□□□ 1.01
SSU72-204ENST00000378726 PPP4R3CPQ6ZMV5 832 aa21.39■■□□□ 1.01
SSU72-204ENST00000378726 CCDC51Q96ER9 411 aa21.39■■□□□ 1.01
SSU72-204ENST00000378726 MOV10L1Q9BXT6 1211 aaKnown RBP21.39■■□□□ 1.01
SSU72-204ENST00000378726 NDST4Q9H3R1 872 aa21.39■■□□□ 1.01
SSU72-204ENST00000378726 DBR1Q9UK59 544 aaKnown RBP21.39■■□□□ 1.01
SSU72-204ENST00000378726 ODF2LQ9ULJ1 636 aa21.39■■□□□ 1.01
SSU72-204ENST00000378726 PFASO15067 1338 aa21.38■■□□□ 1.01
SSU72-204ENST00000378726 SOWAHDA6NJG2 315 aa21.38■■□□□ 1.01
SSU72-204ENST00000378726 SASH3O75995 380 aa21.38■■□□□ 1.01
SSU72-204ENST00000378726 GUCY2CP25092 1073 aa21.38■■□□□ 1.01
SSU72-204ENST00000378726 PSMC5P62195 406 aa21.38■■□□□ 1.01
SSU72-204ENST00000378726 UGCGQ16739 394 aa21.38■■□□□ 1.01
SSU72-204ENST00000378726 EDRF1Q3B7T1 1238 aa21.38■■□□□ 1.01
SSU72-204ENST00000378726 RSRC2Q7L4I2 434 aaKnown RBP21.38■■□□□ 1.01
SSU72-204ENST00000378726 C4orf19Q8IY42 314 aa21.38■■□□□ 1.01
SSU72-204ENST00000378726 IRX2Q9BZI1 471 aaPredicted RBP21.38■■□□□ 1.01
SSU72-204ENST00000378726 TRAF3IP3Q9Y228 551 aa21.38■■□□□ 1.01
SSU72-204ENST00000378726 PCDHA10Q9Y5I2 948 aa21.38■■□□□ 1.01
SSU72-204ENST00000378726 SCN4AP35499 1836 aa21.38■■□□□ 1.01
SSU72-204ENST00000378726 SPATA31C2B4DYI2 1134 aa21.37■■□□□ 1.01
SSU72-204ENST00000378726 EIF3JO75822 258 aaKnown RBP21.37■■□□□ 1.01
SSU72-204ENST00000378726 CNMDO75829 334 aa21.37■■□□□ 1.01
SSU72-204ENST00000378726 ERCC3P19447 782 aa21.37■■□□□ 1.01
SSU72-204ENST00000378726 OSBPP22059 807 aa21.37■■□□□ 1.01
SSU72-204ENST00000378726 NMT1P30419 496 aaKnown RBP21.37■■□□□ 1.01
SSU72-204ENST00000378726 YWHABP31946 246 aaKnown RBP21.37■■□□□ 1.01
SSU72-204ENST00000378726 RARRES1P49788 294 aa21.37■■□□□ 1.01
SSU72-204ENST00000378726 ZNF131P52739 623 aa21.37■■□□□ 1.01
SSU72-204ENST00000378726 FAM193AP78312 1265 aa21.37■■□□□ 1.01
SSU72-204ENST00000378726 BMT2Q1RMZ1 405 aa21.37■■□□□ 1.01
SSU72-204ENST00000378726 CC2D1AQ6P1N0 951 aaPredicted RBP21.37■■□□□ 1.01
SSU72-204ENST00000378726 TRMT1LQ7Z2T5 733 aaKnown RBP21.37■■□□□ 1.01
SSU72-204ENST00000378726 SENP7Q9BQF6 1050 aa21.37■■□□□ 1.01
SSU72-204ENST00000378726 TTC26A0AVF1 554 aa21.37■■□□□ 1.01
SSU72-204ENST00000378726 TBC1D8O95759 1140 aa21.37■■□□□ 1.01
SSU72-204ENST00000378726 GNA14O95837 355 aa21.37■■□□□ 1.01
SSU72-204ENST00000378726 KRT9P35527 623 aa21.37■■□□□ 1.01
SSU72-204ENST00000378726 GJA5P36382 358 aa21.37■■□□□ 1.01
SSU72-204ENST00000378726 FSTL1Q12841 308 aa21.37■■□□□ 1.01
SSU72-204ENST00000378726 CCDC40Q4G0X9 1142 aa21.37■■□□□ 1.01
SSU72-204ENST00000378726 GPAT2Q6NUI2 795 aa21.37■■□□□ 1.01
SSU72-204ENST00000378726 GPR161Q8N6U8 529 aaKnown RBP21.37■■□□□ 1.01
SSU72-204ENST00000378726 RDM1Q8NG50 284 aa21.37■■□□□ 1.01
SSU72-204ENST00000378726 ERGIC2Q96RQ1 377 aa21.37■■□□□ 1.01
SSU72-204ENST00000378726 NAA15Q9BXJ9 866 aaKnown RBP21.37■■□□□ 1.01
SSU72-204ENST00000378726 RBPJLQ9UBG7 517 aa21.37■■□□□ 1.01
SSU72-204ENST00000378726 SEL1LQ9UBV2 794 aa21.37■■□□□ 1.01
SSU72-204ENST00000378726 POTEB2H3BUK9 544 aa21.36■■□□□ 1.01
SSU72-204ENST00000378726 PDXKO00764 312 aa21.36■■□□□ 1.01
SSU72-204ENST00000378726 CETN3O15182 167 aa21.36■■□□□ 1.01
SSU72-204ENST00000378726 POLR3GO15318 223 aaPredicted RBP21.36■■□□□ 1.01
SSU72-204ENST00000378726 MAEAQ7L5Y9 396 aa21.36■■□□□ 1.01
SSU72-204ENST00000378726 ZNF720Q7Z2F6 126 aa21.36■■□□□ 1.01
SSU72-204ENST00000378726 PCMTD1Q96MG8 357 aaPredicted RBP21.36■■□□□ 1.01
SSU72-204ENST00000378726 TXNRD2Q9NNW7 524 aa21.36■■□□□ 1.01
SSU72-204ENST00000378726 ASTN1O14525 1302 aa21.36■■□□□ 1.01
SSU72-204ENST00000378726 A0A0U1RQJ8 604 aa21.36■■□□□ 1.01
SSU72-204ENST00000378726 HIP1RO75146 1068 aa21.36■■□□□ 1.01
SSU72-204ENST00000378726 CYP2C19P33261 490 aa21.36■■□□□ 1.01
SSU72-204ENST00000378726 KCNA1Q09470 495 aa21.36■■□□□ 1.01
SSU72-204ENST00000378726 Q3C1V9 767 aa21.36■■□□□ 1.01
SSU72-204ENST00000378726 ODR4Q5SWX8 454 aa21.36■■□□□ 1.01
SSU72-204ENST00000378726 FAM178BQ8IXR5 827 aa21.36■■□□□ 1.01
SSU72-204ENST00000378726 ZC3H3Q8IXZ2 948 aaKnown RBP21.36■■□□□ 1.01
SSU72-204ENST00000378726 ATRIPQ8WXE1 791 aa21.36■■□□□ 1.01
SSU72-204ENST00000378726 SH2D3AQ9BRG2 576 aa21.36■■□□□ 1.01
SSU72-204ENST00000378726 NUP58Q9BVL2 599 aa21.36■■□□□ 1.01
SSU72-204ENST00000378726 ABHD10Q9NUJ1 306 aa21.36■■□□□ 1.01
SSU72-204ENST00000378726 CAPN11Q9UMQ6 739 aa21.36■■□□□ 1.01
SSU72-204ENST00000378726 LUC7L2Q9Y383 392 aaKnown RBP21.36■■□□□ 1.01
SSU72-204ENST00000378726 CCDC66A2RUB6 948 aa21.35■■□□□ 1.01
SSU72-204ENST00000378726 CALUO43852 315 aaPredicted RBP21.35■■□□□ 1.01
SSU72-204ENST00000378726 SLC25A27O95847 323 aa21.35■■□□□ 1.01
SSU72-204ENST00000378726 NR2F2P24468 414 aa21.35■■□□□ 1.01
SSU72-204ENST00000378726 KLK7P49862 253 aa21.35■■□□□ 1.01
SSU72-204ENST00000378726 ALDH5A1P51649 535 aaPredicted RBP21.35■■□□□ 1.01
SSU72-204ENST00000378726 SNAPC2Q13487 334 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms