RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 PIGOQ8TEQ8 1089 aa21.37■■□□□ 1.01
SHROOM1-202ENST00000378676 FAM153AQ9UHL3 310 aa21.37■■□□□ 1.01
SHROOM1-202ENST00000378676 BTNL10A8MVZ5 291 aa21.36■■□□□ 1.01
SHROOM1-202ENST00000378676 ZNF76P36508 570 aa21.36■■□□□ 1.01
SHROOM1-202ENST00000378676 GUCY2DQ02846 1103 aa21.36■■□□□ 1.01
SHROOM1-202ENST00000378676 PTPROQ16827 1216 aa21.36■■□□□ 1.01
SHROOM1-202ENST00000378676 MSL1Q68DK7 614 aa21.36■■□□□ 1.01
SHROOM1-202ENST00000378676 RINT1Q6NUQ1 792 aa21.36■■□□□ 1.01
SHROOM1-202ENST00000378676 EPB41L5Q9HCM4 733 aa21.36■■□□□ 1.01
SHROOM1-202ENST00000378676 NAGPAQ9UK23 515 aa21.36■■□□□ 1.01
SHROOM1-202ENST00000378676 NFU1Q9UMS0 254 aa21.36■■□□□ 1.01
SHROOM1-202ENST00000378676 RRP15Q9Y3B9 282 aaKnown RBP21.36■■□□□ 1.01
SHROOM1-202ENST00000378676 ATRNL1Q5VV63 1379 aa21.36■■□□□ 1.01
SHROOM1-202ENST00000378676 TGFB1I1O43294 461 aa21.36■■□□□ 1.01
SHROOM1-202ENST00000378676 NPM3O75607 178 aaKnown RBP21.36■■□□□ 1.01
SHROOM1-202ENST00000378676 CYP3A4P08684 503 aa21.36■■□□□ 1.01
SHROOM1-202ENST00000378676 KIAA1755Q5JYT7 1200 aa21.36■■□□□ 1.01
SHROOM1-202ENST00000378676 GCNT4Q9P109 453 aa21.36■■□□□ 1.01
SHROOM1-202ENST00000378676 NENFQ9UMX5 172 aa21.36■■□□□ 1.01
SHROOM1-202ENST00000378676 TNS1Q9HBL0 1735 aaKnown RBP21.35■■□□□ 1.01
SHROOM1-202ENST00000378676 SLC16A3O15427 465 aaKnown RBP21.35■■□□□ 1.01
SHROOM1-202ENST00000378676 SHOX2O60902 331 aaPredicted RBP21.35■■□□□ 1.01
SHROOM1-202ENST00000378676 NMT1P30419 496 aaKnown RBP21.35■■□□□ 1.01
SHROOM1-202ENST00000378676 JAM2P57087 298 aa21.35■■□□□ 1.01
SHROOM1-202ENST00000378676 TTMPQ5BVD1 217 aa21.35■■□□□ 1.01
SHROOM1-202ENST00000378676 IFT20Q8IY31 132 aa21.35■■□□□ 1.01
SHROOM1-202ENST00000378676 CASKIN2Q8WXE0 1202 aa21.35■■□□□ 1.01
SHROOM1-202ENST00000378676 AKT1S1Q96B36 256 aa21.35■■□□□ 1.01
SHROOM1-202ENST00000378676 ARL8AQ96BM9 186 aa21.35■■□□□ 1.01
SHROOM1-202ENST00000378676 SERPINA10Q9UK55 444 aa21.35■■□□□ 1.01
SHROOM1-202ENST00000378676 MYO1CO00159 1063 aa21.34■■□□□ 1.01
SHROOM1-202ENST00000378676 ZBTB39O15060 712 aa21.34■■□□□ 1.01
SHROOM1-202ENST00000378676 EPB41P11171 864 aaKnown RBP21.34■■□□□ 1.01
SHROOM1-202ENST00000378676 PRKCIP41743 596 aa21.34■■□□□ 1.01
SHROOM1-202ENST00000378676 ECE1P42892 770 aa21.34■■□□□ 1.01
SHROOM1-202ENST00000378676 TRADDQ15628 312 aa21.34■■□□□ 1.01
SHROOM1-202ENST00000378676 RBM26Q5T8P6 1007 aaKnown RBP21.34■■□□□ 1.01
SHROOM1-202ENST00000378676 GBP6Q6ZN66 633 aa21.34■■□□□ 1.01
SHROOM1-202ENST00000378676 USP38Q8NB14 1042 aa21.34■■□□□ 1.01
SHROOM1-202ENST00000378676 ZIM3Q96PE6 472 aa21.34■■□□□ 1.01
SHROOM1-202ENST00000378676 FEZ2Q9UHY8 353 aaPredicted RBP21.34■■□□□ 1.01
SHROOM1-202ENST00000378676 PCDHB13Q9Y5F0 798 aa21.34■■□□□ 1.01
SHROOM1-202ENST00000378676 CHMP2AO43633 222 aa21.34■■□□□ 1.01
SHROOM1-202ENST00000378676 LRRC57Q8N9N7 239 aa21.34■■□□□ 1.01
SHROOM1-202ENST00000378676 IFT81Q8WYA0 676 aa21.34■■□□□ 1.01
SHROOM1-202ENST00000378676 DYDC2Q96IM9 177 aa21.34■■□□□ 1.01
SHROOM1-202ENST00000378676 STK24Q9Y6E0 443 aa21.34■■□□□ 1.01
SHROOM1-202ENST00000378676 GOLGA8KD6RF30 607 aa21.33■■□□□ 1.01
SHROOM1-202ENST00000378676 PIK3CDO00329 1044 aa21.33■■□□□ 1.01
SHROOM1-202ENST00000378676 TRIM66O15016 1216 aa21.33■■□□□ 1.01
SHROOM1-202ENST00000378676 KIF4AO95239 1232 aa21.33■■□□□ 1.01
SHROOM1-202ENST00000378676 ZC2HC1CQ53FD0 456 aaPredicted RBP21.33■■□□□ 1.01
SHROOM1-202ENST00000378676 ALKBH5Q6P6C2 394 aaKnown RBP21.33■■□□□ 1.01
SHROOM1-202ENST00000378676 KSR1Q8IVT5 923 aa21.33■■□□□ 1.01
SHROOM1-202ENST00000378676 BORCS6Q96GS4 357 aa21.33■■□□□ 1.01
SHROOM1-202ENST00000378676 METTL14Q9HCE5 456 aaKnown RBP21.33■■□□□ 1.01
SHROOM1-202ENST00000378676 OLFML3Q9NRN5 406 aa21.33■■□□□ 1.01
SHROOM1-202ENST00000378676 LOXHD1Q8IVV2 1947 aa21.33■■□□□ 1.01
SHROOM1-202ENST00000378676 PSME4Q14997 1843 aa21.33■■□□□ 1.01
SHROOM1-202ENST00000378676 KCNK3O14649 394 aa21.33■■□□□ 1
SHROOM1-202ENST00000378676 RAD51CO43502 376 aa21.33■■□□□ 1
SHROOM1-202ENST00000378676 UBXN2AP68543 259 aa21.33■■□□□ 1
SHROOM1-202ENST00000378676 NNTQ13423 1086 aa21.33■■□□□ 1
SHROOM1-202ENST00000378676 C10orf76Q5T2E6 689 aa21.33■■□□□ 1
SHROOM1-202ENST00000378676 HSD17B14Q9BPX1 270 aa21.33■■□□□ 1
SHROOM1-202ENST00000378676 BZW2Q9Y6E2 419 aaKnown RBP21.33■■□□□ 1
SHROOM1-202ENST00000378676 RGPD3A6NKT7 1758 aaPredicted RBP21.32■■□□□ 1
SHROOM1-202ENST00000378676 RGPD4Q7Z3J3 1758 aa21.32■■□□□ 1
SHROOM1-202ENST00000378676 HSF2BPO75031 334 aa21.32■■□□□ 1
SHROOM1-202ENST00000378676 RPL13P26373 211 aaKnown RBP21.32■■□□□ 1
SHROOM1-202ENST00000378676 NOP2P46087 812 aaKnown RBP21.32■■□□□ 1
SHROOM1-202ENST00000378676 COG2Q14746 738 aa21.32■■□□□ 1
SHROOM1-202ENST00000378676 RPS6KA1Q15418 735 aa21.32■■□□□ 1
SHROOM1-202ENST00000378676 AOC3Q16853 763 aa21.32■■□□□ 1
SHROOM1-202ENST00000378676 ALS2CLQ60I27 953 aa21.32■■□□□ 1
SHROOM1-202ENST00000378676 KLHL7Q8IXQ5 586 aa21.32■■□□□ 1
SHROOM1-202ENST00000378676 OLIG1Q8TAK6 271 aa21.32■■□□□ 1
SHROOM1-202ENST00000378676 CSRNP1Q96S65 589 aa21.32■■□□□ 1
SHROOM1-202ENST00000378676 RSPH14Q9UHP6 348 aa21.32■■□□□ 1
SHROOM1-202ENST00000378676 TMEM59LQ9UK28 342 aa21.32■■□□□ 1
SHROOM1-202ENST00000378676 SLITRK3O94933 977 aa21.32■■□□□ 1
SHROOM1-202ENST00000378676 CFBP00751 764 aa21.32■■□□□ 1
SHROOM1-202ENST00000378676 ZBTB48P10074 688 aaPredicted RBP21.32■■□□□ 1
SHROOM1-202ENST00000378676 PAK2Q13177 524 aa21.32■■□□□ 1
SHROOM1-202ENST00000378676 OTOP1Q7RTM1 612 aa21.32■■□□□ 1
SHROOM1-202ENST00000378676 TPH2Q8IWU9 490 aa21.32■■□□□ 1
SHROOM1-202ENST00000378676 TAF4BQ92750 862 aa21.32■■□□□ 1
SHROOM1-202ENST00000378676 PRMT6Q96LA8 375 aaPredicted RBP21.32■■□□□ 1
SHROOM1-202ENST00000378676 CCDC43Q96MW1 224 aaKnown RBP21.32■■□□□ 1
SHROOM1-202ENST00000378676 DDX3XO00571 662 aaKnown RBP eCLIP21.31■■□□□ 1
SHROOM1-202ENST00000378676 OPA1O60313 960 aa21.31■■□□□ 1
SHROOM1-202ENST00000378676 PPFIA4O75335 1185 aa21.31■■□□□ 1
SHROOM1-202ENST00000378676 PSMD10O75832 226 aa21.31■■□□□ 1
SHROOM1-202ENST00000378676 FAM13AO94988 1023 aa21.31■■□□□ 1
SHROOM1-202ENST00000378676 GAP43P17677 238 aa21.31■■□□□ 1
SHROOM1-202ENST00000378676 GUCY2FP51841 1108 aa21.31■■□□□ 1
SHROOM1-202ENST00000378676 LRCH2Q5VUJ6 765 aa21.31■■□□□ 1
SHROOM1-202ENST00000378676 C1orf186Q6ZWK4 172 aa21.31■■□□□ 1
SHROOM1-202ENST00000378676 ACER1Q8TDN7 264 aa21.31■■□□□ 1
SHROOM1-202ENST00000378676 FBXL5Q9UKA1 691 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms