RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 TBX3O15119 743 aa19.2■□□□□ 0.66
RER1-202ENST00000378512 CHRNA1P02708 482 aa19.2■□□□□ 0.66
RER1-202ENST00000378512 JAK3P52333 1124 aa19.2■□□□□ 0.66
RER1-202ENST00000378512 HMGN5P82970 282 aaKnown RBP19.2■□□□□ 0.66
RER1-202ENST00000378512 LETM2Q2VYF4 491 aa19.2■□□□□ 0.66
RER1-202ENST00000378512 BBXQ8WY36 941 aaPredicted RBP19.2■□□□□ 0.66
RER1-202ENST00000378512 GJA10Q969M2 543 aa19.2■□□□□ 0.66
RER1-202ENST00000378512 FAM20AQ96MK3 541 aa19.2■□□□□ 0.66
RER1-202ENST00000378512 NAP1L4Q99733 375 aaKnown RBP19.2■□□□□ 0.66
RER1-202ENST00000378512 TEKT3Q9BXF9 490 aa19.2■□□□□ 0.66
RER1-202ENST00000378512 BRMS1Q9HCU9 246 aa19.2■□□□□ 0.66
RER1-202ENST00000378512 SMIM35A0A1B0GVV1 85 aa19.19■□□□□ 0.66
RER1-202ENST00000378512 ZNF862O60290 1169 aa19.19■□□□□ 0.66
RER1-202ENST00000378512 EFCAB14O75071 495 aa19.19■□□□□ 0.66
RER1-202ENST00000378512 POU3F3P20264 500 aaPredicted RBP19.19■□□□□ 0.66
RER1-202ENST00000378512 MRPS5P82675 430 aaKnown RBP19.19■□□□□ 0.66
RER1-202ENST00000378512 SKIV2LQ15477 1246 aaKnown RBP19.19■□□□□ 0.66
RER1-202ENST00000378512 ZNF484Q5JVG2 852 aa19.19■□□□□ 0.66
RER1-202ENST00000378512 MTHFD1LQ6UB35 978 aa19.19■□□□□ 0.66
RER1-202ENST00000378512 DIS3L2Q8IYB7 885 aaKnown RBP19.19■□□□□ 0.66
RER1-202ENST00000378512 TRAPPC12Q8WVT3 735 aa19.19■□□□□ 0.66
RER1-202ENST00000378512 HAS1Q92839 578 aa19.19■□□□□ 0.66
RER1-202ENST00000378512 ZBTB10Q96DT7 871 aa19.19■□□□□ 0.66
RER1-202ENST00000378512 NECAB3Q96P71 396 aaPredicted RBP19.19■□□□□ 0.66
RER1-202ENST00000378512 TCEAL9Q9UHQ7 104 aa19.19■□□□□ 0.66
RER1-202ENST00000378512 LINC01553A4QN01 128 aa19.18■□□□□ 0.66
RER1-202ENST00000378512 ST18O60284 1047 aa19.18■□□□□ 0.66
RER1-202ENST00000378512 CD2BP2O95400 341 aaKnown RBP19.18■□□□□ 0.66
RER1-202ENST00000378512 IGBP1P78318 339 aa19.18■□□□□ 0.66
RER1-202ENST00000378512 PPP2R5CQ13362 524 aa19.18■□□□□ 0.66
RER1-202ENST00000378512 ADAMTS19Q8TE59 1207 aa19.18■□□□□ 0.66
RER1-202ENST00000378512 DNAJB3Q8WWF6 145 aa19.18■□□□□ 0.66
RER1-202ENST00000378512 RAD9AQ99638 391 aa19.18■□□□□ 0.66
RER1-202ENST00000378512 GABBR1Q9UBS5 961 aa19.18■□□□□ 0.66
RER1-202ENST00000378512 VAV3Q9UKW4 847 aa19.18■□□□□ 0.66
RER1-202ENST00000378512 GTPBP6O43824 516 aaPredicted RBP19.17■□□□□ 0.66
RER1-202ENST00000378512 CCNT1O60563 726 aaKnown RBP19.17■□□□□ 0.66
RER1-202ENST00000378512 KCNQ1P51787 676 aa19.17■□□□□ 0.66
RER1-202ENST00000378512 TRIM29Q14134 588 aa19.17■□□□□ 0.66
RER1-202ENST00000378512 RSPH3Q86UC2 560 aa19.17■□□□□ 0.66
RER1-202ENST00000378512 MYOCDQ8IZQ8 938 aa19.17■□□□□ 0.66
RER1-202ENST00000378512 FBXO18Q8NFZ0 1043 aa19.17■□□□□ 0.66
RER1-202ENST00000378512 BACH2Q9BYV9 841 aa19.17■□□□□ 0.66
RER1-202ENST00000378512 SQORQ9Y6N5 450 aa19.17■□□□□ 0.66
RER1-202ENST00000378512 KDM3AQ9Y4C1 1321 aa19.17■□□□□ 0.66
RER1-202ENST00000378512 KLRC1P26715 233 aa19.17■□□□□ 0.66
RER1-202ENST00000378512 UGCGQ16739 394 aa19.17■□□□□ 0.66
RER1-202ENST00000378512 NME8Q8N427 588 aa19.17■□□□□ 0.66
RER1-202ENST00000378512 FAM167AQ96KS9 214 aa19.17■□□□□ 0.66
RER1-202ENST00000378512 C17orf80Q9BSJ5 609 aa19.17■□□□□ 0.66
RER1-202ENST00000378512 SUGCTQ9HAC7 445 aa19.17■□□□□ 0.66
RER1-202ENST00000378512 TCF20Q9UGU0 1960 aaKnown RBP19.17■□□□□ 0.66
RER1-202ENST00000378512 SAMM50Q9Y512 469 aa19.17■□□□□ 0.66
RER1-202ENST00000378512 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.16■□□□□ 0.66
RER1-202ENST00000378512 STBD1O95210 358 aa19.16■□□□□ 0.66
RER1-202ENST00000378512 C22orf31O95567 290 aa19.16■□□□□ 0.66
RER1-202ENST00000378512 MRPS6P82932 125 aaKnown RBP19.16■□□□□ 0.66
RER1-202ENST00000378512 SPIRE1Q08AE8 756 aa19.16■□□□□ 0.66
RER1-202ENST00000378512 POTEDQ86YR6 584 aa19.16■□□□□ 0.66
RER1-202ENST00000378512 LINC01465Q8N7H1 131 aa19.16■□□□□ 0.66
RER1-202ENST00000378512 APBB2Q92870 758 aa19.16■□□□□ 0.66
RER1-202ENST00000378512 TMX3Q96JJ7 454 aa19.16■□□□□ 0.66
RER1-202ENST00000378512 C8orf76Q96K31 380 aa19.16■□□□□ 0.66
RER1-202ENST00000378512 TNFRSF10AO00220 468 aa19.15■□□□□ 0.66
RER1-202ENST00000378512 WNT7AO00755 349 aa19.15■□□□□ 0.66
RER1-202ENST00000378512 CHMP2AO43633 222 aa19.15■□□□□ 0.66
RER1-202ENST00000378512 OATP04181 439 aa19.15■□□□□ 0.66
RER1-202ENST00000378512 MCM2P49736 904 aa19.15■□□□□ 0.66
RER1-202ENST00000378512 ERVK-21P61565 698 aa19.15■□□□□ 0.66
RER1-202ENST00000378512 LPIN1Q14693 890 aa19.15■□□□□ 0.66
RER1-202ENST00000378512 TARBP2Q15633 366 aaKnown RBP19.15■□□□□ 0.66
RER1-202ENST00000378512 FBXO47Q5MNV8 452 aa19.15■□□□□ 0.66
RER1-202ENST00000378512 MIER3Q7Z3K6 550 aa19.15■□□□□ 0.66
RER1-202ENST00000378512 KIAA0319LQ8IZA0 1049 aa19.15■□□□□ 0.66
RER1-202ENST00000378512 SEPT8Q92599 483 aa19.15■□□□□ 0.66
RER1-202ENST00000378512 CEP89Q96ST8 783 aa19.15■□□□□ 0.66
RER1-202ENST00000378512 FOXP1Q9H334 677 aaPredicted RBP19.15■□□□□ 0.66
RER1-202ENST00000378512 CEP131Q9UPN4 1083 aa19.15■□□□□ 0.66
RER1-202ENST00000378512 CDY2AQ9Y6F7 541 aa19.15■□□□□ 0.66
RER1-202ENST00000378512 COL4A6Q14031 1691 aa19.14■□□□□ 0.66
RER1-202ENST00000378512 ARID2Q68CP9 1835 aa19.14■□□□□ 0.65
RER1-202ENST00000378512 EML1O00423 815 aa19.14■□□□□ 0.65
RER1-202ENST00000378512 UPP2O95045 317 aa19.14■□□□□ 0.65
RER1-202ENST00000378512 AMHP03971 560 aa19.14■□□□□ 0.65
RER1-202ENST00000378512 BMP1P13497 986 aa19.14■□□□□ 0.65
RER1-202ENST00000378512 HTRA4P83105 476 aaPredicted RBP19.14■□□□□ 0.65
RER1-202ENST00000378512 PRKCEQ02156 737 aa19.14■□□□□ 0.65
RER1-202ENST00000378512 IER5Q5VY09 327 aa19.14■□□□□ 0.65
RER1-202ENST00000378512 TGS1Q96RS0 853 aaKnown RBP19.14■□□□□ 0.65
RER1-202ENST00000378512 UHRF1Q96T88 793 aaPredicted RBP19.14■□□□□ 0.65
RER1-202ENST00000378512 NIFKQ9BYG3 293 aaKnown RBP19.14■□□□□ 0.65
RER1-202ENST00000378512 IFIH1Q9BYX4 1025 aaKnown RBP19.14■□□□□ 0.65
RER1-202ENST00000378512 TTC3P53804 2025 aa19.14■□□□□ 0.65
RER1-202ENST00000378512 GHRP10912 638 aa19.13■□□□□ 0.65
RER1-202ENST00000378512 GUCY1B3Q02153 619 aa19.13■□□□□ 0.65
RER1-202ENST00000378512 SAFBQ15424 915 aaKnown RBP eCLIP19.13■□□□□ 0.652e-6■■■■□ 19.6
RER1-202ENST00000378512 TSHZ1Q6ZSZ6 1077 aa19.13■□□□□ 0.65
RER1-202ENST00000378512 CKAP2LQ8IYA6 745 aa19.13■□□□□ 0.65
RER1-202ENST00000378512 SLFN12Q8IYM2 578 aa19.13■□□□□ 0.65
RER1-202ENST00000378512 MTMR9Q96QG7 549 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms