RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 CD44P16070 742 aaKnown RBP14.29□□□□□ -0.12
NPHP4-203ENST00000378169 ADCY1Q08828 1119 aa14.29□□□□□ -0.12
NPHP4-203ENST00000378169 MTMR2Q13614 643 aa14.29□□□□□ -0.12
NPHP4-203ENST00000378169 SETDB1Q15047 1291 aa14.29□□□□□ -0.12
NPHP4-203ENST00000378169 NSUN6Q8TEA1 469 aaKnown RBP14.29□□□□□ -0.12
NPHP4-203ENST00000378169 PRMT6Q96LA8 375 aaPredicted RBP14.29□□□□□ -0.12
NPHP4-203ENST00000378169 CAPS2Q9BXY5 557 aa14.29□□□□□ -0.12
NPHP4-203ENST00000378169 TBC1D22BQ9NU19 505 aa14.29□□□□□ -0.12
NPHP4-203ENST00000378169 NFU1Q9UMS0 254 aa14.29□□□□□ -0.12
NPHP4-203ENST00000378169 A0A1W2PQC6 194 aa14.29□□□□□ -0.12
NPHP4-203ENST00000378169 GYPCP04921 128 aa14.29□□□□□ -0.12
NPHP4-203ENST00000378169 POLR2BP30876 1174 aaKnown RBP14.29□□□□□ -0.12
NPHP4-203ENST00000378169 EPHB4P54760 987 aa14.29□□□□□ -0.12
NPHP4-203ENST00000378169 TAF12Q16514 161 aa14.29□□□□□ -0.12
NPHP4-203ENST00000378169 PARP2Q9UGN5 583 aa14.29□□□□□ -0.12
NPHP4-203ENST00000378169 PDS5AQ29RF7 1337 aaKnown RBP14.28□□□□□ -0.12
NPHP4-203ENST00000378169 M0QZ92 97 aa14.28□□□□□ -0.12
NPHP4-203ENST00000378169 PSMD14O00487 310 aa14.28□□□□□ -0.12
NPHP4-203ENST00000378169 FGGP02679 453 aa14.28□□□□□ -0.12
NPHP4-203ENST00000378169 CYFIP1Q7L576 1253 aa14.28□□□□□ -0.12
NPHP4-203ENST00000378169 GIMAP8Q8ND71 665 aaPredicted RBP14.28□□□□□ -0.12
NPHP4-203ENST00000378169 SLC17A8Q8NDX2 589 aa14.28□□□□□ -0.12
NPHP4-203ENST00000378169 FAM213AQ9BRX8 229 aa14.28□□□□□ -0.12
NPHP4-203ENST00000378169 RASSF4Q9H2L5 321 aa14.28□□□□□ -0.12
NPHP4-203ENST00000378169 CAPN11Q9UMQ6 739 aa14.28□□□□□ -0.12
NPHP4-203ENST00000378169 TFR2Q9UP52 801 aa14.28□□□□□ -0.12
NPHP4-203ENST00000378169 IFNAR2P48551 515 aa14.28□□□□□ -0.12
NPHP4-203ENST00000378169 KLK7P49862 253 aa14.28□□□□□ -0.12
NPHP4-203ENST00000378169 DRAP1Q14919 205 aaPredicted RBP14.28□□□□□ -0.12
NPHP4-203ENST00000378169 TRIP13Q15645 432 aaPredicted RBP14.28□□□□□ -0.12
NPHP4-203ENST00000378169 HADHQ16836 314 aaKnown RBP14.28□□□□□ -0.12
NPHP4-203ENST00000378169 GLYCTKQ8IVS8 523 aa14.28□□□□□ -0.12
NPHP4-203ENST00000378169 MSTO1Q9BUK6 570 aa14.28□□□□□ -0.12
NPHP4-203ENST00000378169 RPAP3Q9H6T3 665 aaPredicted RBP14.28□□□□□ -0.12
NPHP4-203ENST00000378169 ZNF70Q9UC06 446 aaPredicted RBP14.28□□□□□ -0.12
NPHP4-203ENST00000378169 PPP1R3GB7ZBB8 358 aa14.28□□□□□ -0.12
NPHP4-203ENST00000378169 ATP1A1P05023 1023 aaKnown RBP14.28□□□□□ -0.12
NPHP4-203ENST00000378169 BFSP1Q12934 665 aa14.28□□□□□ -0.12
NPHP4-203ENST00000378169 C7orf31Q8N865 590 aa14.28□□□□□ -0.12
NPHP4-203ENST00000378169 ZNF526Q8TF50 670 aaPredicted RBP14.28□□□□□ -0.12
NPHP4-203ENST00000378169 C7orf25Q9BPX7 421 aa14.28□□□□□ -0.12
NPHP4-203ENST00000378169 REEP2Q9BRK0 252 aa14.28□□□□□ -0.12
NPHP4-203ENST00000378169 DHX9Q08211 1270 aaKnown RBP14.27□□□□□ -0.12
NPHP4-203ENST00000378169 IFRD2Q12894 506 aaPredicted RBP14.27□□□□□ -0.12
NPHP4-203ENST00000378169 SGO2Q562F6 1265 aa14.27□□□□□ -0.12
NPHP4-203ENST00000378169 ACER1Q8TDN7 264 aa14.27□□□□□ -0.12
NPHP4-203ENST00000378169 ECE1P42892 770 aa14.27□□□□□ -0.12
NPHP4-203ENST00000378169 SLCO1A2P46721 670 aa14.27□□□□□ -0.12
NPHP4-203ENST00000378169 SNX16P57768 344 aa14.27□□□□□ -0.12
NPHP4-203ENST00000378169 CCNA1P78396 465 aa14.27□□□□□ -0.12
NPHP4-203ENST00000378169 TFDP1Q14186 410 aa14.27□□□□□ -0.12
NPHP4-203ENST00000378169 RBM43Q6ZSC3 357 aaKnown RBP14.27□□□□□ -0.12
NPHP4-203ENST00000378169 MICALL2Q8IY33 904 aa14.27□□□□□ -0.12
NPHP4-203ENST00000378169 OTUD5Q96G74 571 aa14.27□□□□□ -0.12
NPHP4-203ENST00000378169 TRIM7Q9C029 511 aa14.27□□□□□ -0.12
NPHP4-203ENST00000378169 IL17RBQ9NRM6 502 aa14.27□□□□□ -0.12
NPHP4-203ENST00000378169 DNAJC17Q9NVM6 304 aaKnown RBP14.27□□□□□ -0.12
NPHP4-203ENST00000378169 HOXC10Q9NYD6 342 aa14.27□□□□□ -0.12
NPHP4-203ENST00000378169 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.27□□□□□ -0.13
NPHP4-203ENST00000378169 HIP1RO75146 1068 aa14.27□□□□□ -0.13
NPHP4-203ENST00000378169 ACTN1P12814 892 aa14.27□□□□□ -0.13
NPHP4-203ENST00000378169 IREB2P48200 963 aaKnown RBP14.27□□□□□ -0.13
NPHP4-203ENST00000378169 DYNLT1P63172 113 aa14.27□□□□□ -0.13
NPHP4-203ENST00000378169 KRT76Q01546 638 aa14.27□□□□□ -0.13
NPHP4-203ENST00000378169 KRT81Q14533 505 aa14.27□□□□□ -0.13
NPHP4-203ENST00000378169 STXBP2Q15833 593 aa14.27□□□□□ -0.13
NPHP4-203ENST00000378169 HHATQ5VTY9 493 aa14.27□□□□□ -0.13
NPHP4-203ENST00000378169 CYP4F22Q6NT55 531 aa14.27□□□□□ -0.13
NPHP4-203ENST00000378169 FAM149B1Q96BN6 582 aa14.27□□□□□ -0.13
NPHP4-203ENST00000378169 CCDC97Q96F63 343 aaPredicted RBP14.27□□□□□ -0.13
NPHP4-203ENST00000378169 PASKQ96RG2 1323 aa14.27□□□□□ -0.13
NPHP4-203ENST00000378169 ENTPD3O75355 529 aa14.26□□□□□ -0.13
NPHP4-203ENST00000378169 ATF2P15336 505 aa14.26□□□□□ -0.13
NPHP4-203ENST00000378169 JAK3P52333 1124 aa14.26□□□□□ -0.13
NPHP4-203ENST00000378169 TTC31Q49AM3 519 aaPredicted RBP14.26□□□□□ -0.13
NPHP4-203ENST00000378169 C6orf163Q5TEZ5 329 aa14.26□□□□□ -0.13
NPHP4-203ENST00000378169 CC2D1AQ6P1N0 951 aaPredicted RBP14.26□□□□□ -0.13
NPHP4-203ENST00000378169 HAUS6Q7Z4H7 955 aa14.26□□□□□ -0.13
NPHP4-203ENST00000378169 PASD1Q8IV76 773 aa14.26□□□□□ -0.13
NPHP4-203ENST00000378169 SREK1Q8WXA9 508 aaKnown RBP14.26□□□□□ -0.13
NPHP4-203ENST00000378169 CNOT7Q9UIV1 285 aaKnown RBP14.26□□□□□ -0.13
NPHP4-203ENST00000378169 A6NNZ2 444 aa14.26□□□□□ -0.13
NPHP4-203ENST00000378169 EIF3CLB5ME19 914 aaKnown RBP14.26□□□□□ -0.13
NPHP4-203ENST00000378169 EYA4O95677 639 aa14.26□□□□□ -0.13
NPHP4-203ENST00000378169 VEGFAP15692 232 aaPredicted RBP14.26□□□□□ -0.13
NPHP4-203ENST00000378169 ZNF211Q13398 564 aaPredicted RBP14.26□□□□□ -0.13
NPHP4-203ENST00000378169 BAATQ14032 418 aaPredicted RBP14.26□□□□□ -0.13
NPHP4-203ENST00000378169 TUBB8Q3ZCM7 444 aa14.26□□□□□ -0.13
NPHP4-203ENST00000378169 DEFB132Q7Z7B7 95 aa14.26□□□□□ -0.13
NPHP4-203ENST00000378169 PNMA8AQ86V59 439 aaPredicted RBP14.26□□□□□ -0.13
NPHP4-203ENST00000378169 EIF3CQ99613 913 aaKnown RBP14.26□□□□□ -0.13
NPHP4-203ENST00000378169 FAM49AQ9H0Q0 323 aaPredicted RBP14.26□□□□□ -0.13
NPHP4-203ENST00000378169 SLC5A4Q9NY91 659 aa14.26□□□□□ -0.13
NPHP4-203ENST00000378169 RNF14Q9UBS8 474 aa14.26□□□□□ -0.13
NPHP4-203ENST00000378169 ATP8B1O43520 1251 aa14.26□□□□□ -0.13
NPHP4-203ENST00000378169 STX2P32856 288 aa14.26□□□□□ -0.13
NPHP4-203ENST00000378169 ZC2HC1CQ53FD0 456 aaPredicted RBP14.26□□□□□ -0.13
NPHP4-203ENST00000378169 MCPH1Q8NEM0 835 aa14.26□□□□□ -0.13
NPHP4-203ENST00000378169 VCPKMTQ9H867 229 aa14.26□□□□□ -0.13
NPHP4-203ENST00000378169 STIM2Q9P246 746 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms