RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 MED24O75448 989 aa18.12■□□□□ 0.49
PCDHA1-201ENST00000378133 TMOD1P28289 359 aa18.12■□□□□ 0.49
PCDHA1-201ENST00000378133 MARSP56192 900 aaKnown RBP18.12■□□□□ 0.49
PCDHA1-201ENST00000378133 ARSHQ5FYA8 562 aa18.12■□□□□ 0.49
PCDHA1-201ENST00000378133 MEI1Q5TIA1 1274 aa18.12■□□□□ 0.49
PCDHA1-201ENST00000378133 CERS5Q8N5B7 392 aa18.12■□□□□ 0.49
PCDHA1-201ENST00000378133 C3orf20Q8ND61 904 aa18.12■□□□□ 0.49
PCDHA1-201ENST00000378133 FBXO41Q8TF61 875 aa18.12■□□□□ 0.49
PCDHA1-201ENST00000378133 INPP4AQ96PE3 977 aaPredicted RBP18.12■□□□□ 0.49
PCDHA1-201ENST00000378133 ACTN1P12814 892 aa18.12■□□□□ 0.49
PCDHA1-201ENST00000378133 SCP2P22307 547 aa18.12■□□□□ 0.49
PCDHA1-201ENST00000378133 QPCTQ16769 361 aa18.12■□□□□ 0.49
PCDHA1-201ENST00000378133 CCDC50Q8IVM0 306 aa18.12■□□□□ 0.49
PCDHA1-201ENST00000378133 CEP120Q8N960 986 aa18.12■□□□□ 0.49
PCDHA1-201ENST00000378133 USP38Q8NB14 1042 aa18.12■□□□□ 0.49
PCDHA1-201ENST00000378133 CNKSR2Q8WXI2 1034 aa18.12■□□□□ 0.49
PCDHA1-201ENST00000378133 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.12■□□□□ 0.49
PCDHA1-201ENST00000378133 ISCUQ9H1K1 167 aa18.12■□□□□ 0.49
PCDHA1-201ENST00000378133 AIPL1Q9NZN9 384 aa18.12■□□□□ 0.49
PCDHA1-201ENST00000378133 POTEFA5A3E0 1075 aa18.11■□□□□ 0.49
PCDHA1-201ENST00000378133 POTEIP0CG38 1075 aa18.11■□□□□ 0.49
PCDHA1-201ENST00000378133 GYS1P13807 737 aa18.11■□□□□ 0.49
PCDHA1-201ENST00000378133 CTNNA1P35221 906 aaKnown RBP18.11■□□□□ 0.49
PCDHA1-201ENST00000378133 CASP5P51878 434 aa18.11■□□□□ 0.49
PCDHA1-201ENST00000378133 ANKRD20A8PQ5CZ79 823 aa18.11■□□□□ 0.49
PCDHA1-201ENST00000378133 POTEGQ6S5H5 508 aa18.11■□□□□ 0.49
PCDHA1-201ENST00000378133 POTEEQ6S8J3 1075 aa18.11■□□□□ 0.49
PCDHA1-201ENST00000378133 SEC16BQ96JE7 1060 aa18.11■□□□□ 0.49
PCDHA1-201ENST00000378133 SCLT1Q96NL6 688 aa18.11■□□□□ 0.49
PCDHA1-201ENST00000378133 HAUS2Q9NVX0 235 aa18.11■□□□□ 0.49
PCDHA1-201ENST00000378133 SWAP70Q9UH65 585 aa18.11■□□□□ 0.49
PCDHA1-201ENST00000378133 SLC12A6Q9UHW9 1150 aa18.11■□□□□ 0.49
PCDHA1-201ENST00000378133 PCDHA1Q9Y5I3 950 aa18.11■□□□□ 0.49
PCDHA1-201ENST00000378133 CETN3O15182 167 aa18.11■□□□□ 0.49
PCDHA1-201ENST00000378133 NR2F2P24468 414 aa18.11■□□□□ 0.49
PCDHA1-201ENST00000378133 ASIC2Q16515 512 aa18.11■□□□□ 0.49
PCDHA1-201ENST00000378133 SPRED3Q2MJR0 410 aa18.11■□□□□ 0.49
PCDHA1-201ENST00000378133 QRICH1Q2TAL8 776 aa18.11■□□□□ 0.49
PCDHA1-201ENST00000378133 TMCO5BA8MYB1 307 aa18.1■□□□□ 0.49
PCDHA1-201ENST00000378133 H0YGN5 161 aa18.1■□□□□ 0.49
PCDHA1-201ENST00000378133 PSMC6P62333 389 aa18.1■□□□□ 0.49
PCDHA1-201ENST00000378133 ERVK-9P63128 1117 aa18.1■□□□□ 0.49
PCDHA1-201ENST00000378133 RUFY4Q6ZNE9 571 aa18.1■□□□□ 0.49
PCDHA1-201ENST00000378133 FAM43BQ6ZT52 329 aaPredicted RBP18.1■□□□□ 0.49
PCDHA1-201ENST00000378133 DNAAF5Q86Y56 855 aa18.1■□□□□ 0.49
PCDHA1-201ENST00000378133 MIEF2Q96C03 454 aa18.1■□□□□ 0.49
PCDHA1-201ENST00000378133 LRRC45Q96CN5 670 aa18.1■□□□□ 0.49
PCDHA1-201ENST00000378133 GANQ9H2C0 597 aa18.1■□□□□ 0.49
PCDHA1-201ENST00000378133 KCNMB3Q9NPA1 279 aa18.1■□□□□ 0.49
PCDHA1-201ENST00000378133 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.1■□□□□ 0.49
PCDHA1-201ENST00000378133 PCDHGC5Q9Y5F6 944 aa18.1■□□□□ 0.49
PCDHA1-201ENST00000378133 NFS1Q9Y697 457 aa18.1■□□□□ 0.49
PCDHA1-201ENST00000378133 MEIS1O00470 390 aa18.1■□□□□ 0.49
PCDHA1-201ENST00000378133 SLC9A1P19634 815 aa18.1■□□□□ 0.49
PCDHA1-201ENST00000378133 SLC12A3P55017 1021 aa18.1■□□□□ 0.49
PCDHA1-201ENST00000378133 BIRC3Q13489 604 aa18.1■□□□□ 0.49
PCDHA1-201ENST00000378133 FAM228AQ86W67 206 aa18.1■□□□□ 0.49
PCDHA1-201ENST00000378133 CACNA2D3Q8IZS8 1091 aa18.1■□□□□ 0.49
PCDHA1-201ENST00000378133 TAF4BQ92750 862 aa18.1■□□□□ 0.49
PCDHA1-201ENST00000378133 ANO3Q9BYT9 981 aa18.1■□□□□ 0.49
PCDHA1-201ENST00000378133 ATP2C2O75185 946 aa18.09■□□□□ 0.49
PCDHA1-201ENST00000378133 MYBP10242 640 aa18.09■□□□□ 0.49
PCDHA1-201ENST00000378133 ZNF844Q08AG5 666 aa18.09■□□□□ 0.49
PCDHA1-201ENST00000378133 UAP1Q16222 522 aaPredicted RBP18.09■□□□□ 0.49
PCDHA1-201ENST00000378133 CATSPER3Q86XQ3 398 aa18.09■□□□□ 0.49
PCDHA1-201ENST00000378133 DHX36Q9H2U1 1008 aaKnown RBP18.09■□□□□ 0.49
PCDHA1-201ENST00000378133 HDAC9Q9UKV0 1011 aa18.09■□□□□ 0.49
PCDHA1-201ENST00000378133 FOCADQ5VW36 1801 aa18.09■□□□□ 0.49
PCDHA1-201ENST00000378133 ARFGEF1Q9Y6D6 1849 aa18.09■□□□□ 0.49
PCDHA1-201ENST00000378133 BACH1O14867 736 aa18.09■□□□□ 0.49
PCDHA1-201ENST00000378133 EZRP15311 586 aaKnown RBP18.09■□□□□ 0.49
PCDHA1-201ENST00000378133 USP11P51784 963 aa18.09■□□□□ 0.49
PCDHA1-201ENST00000378133 PPP2R2AP63151 447 aa18.09■□□□□ 0.49
PCDHA1-201ENST00000378133 PTK2Q05397 1052 aa18.09■□□□□ 0.49
PCDHA1-201ENST00000378133 CUL1Q13616 776 aa18.09■□□□□ 0.49
PCDHA1-201ENST00000378133 SHROOM1Q2M3G4 852 aaPredicted RBP18.09■□□□□ 0.49
PCDHA1-201ENST00000378133 DDX42Q86XP3 938 aaKnown RBP eCLIP18.09■□□□□ 0.49
PCDHA1-201ENST00000378133 EIF1ADQ8N9N8 165 aaKnown RBP18.09■□□□□ 0.49
PCDHA1-201ENST00000378133 TPX2Q9ULW0 747 aaKnown RBP18.09■□□□□ 0.49
PCDHA1-201ENST00000378133 FAM196BA6NMK8 535 aa18.08■□□□□ 0.49
PCDHA1-201ENST00000378133 KCNK3O14649 394 aa18.08■□□□□ 0.49
PCDHA1-201ENST00000378133 APBA3O96018 575 aa18.08■□□□□ 0.49
PCDHA1-201ENST00000378133 ECHS1P30084 290 aa18.08■□□□□ 0.49
PCDHA1-201ENST00000378133 SCTRP47872 440 aa18.08■□□□□ 0.49
PCDHA1-201ENST00000378133 NFIAQ12857 509 aa18.08■□□□□ 0.49
PCDHA1-201ENST00000378133 PABPC4Q13310 644 aaKnown RBP eCLIP18.08■□□□□ 0.49
PCDHA1-201ENST00000378133 CDC42EP5Q6NZY7 148 aa18.08■□□□□ 0.49
PCDHA1-201ENST00000378133 ZFPM1Q8IX07 1006 aa18.08■□□□□ 0.49
PCDHA1-201ENST00000378133 NAP1L4Q99733 375 aaKnown RBP18.08■□□□□ 0.49
PCDHA1-201ENST00000378133 GOLPH3Q9H4A6 298 aa18.08■□□□□ 0.49
PCDHA1-201ENST00000378133 TMEM59LQ9UK28 342 aa18.08■□□□□ 0.49
PCDHA1-201ENST00000378133 FRMD3A2A2Y4 597 aa18.08■□□□□ 0.48
PCDHA1-201ENST00000378133 EDRF1Q3B7T1 1238 aa18.08■□□□□ 0.48
PCDHA1-201ENST00000378133 PRR16Q569H4 304 aa18.08■□□□□ 0.48
PCDHA1-201ENST00000378133 IRF2BP2Q7Z5L9 587 aa18.08■□□□□ 0.48
PCDHA1-201ENST00000378133 UBLCP1Q8WVY7 318 aaPredicted RBP18.08■□□□□ 0.48
PCDHA1-201ENST00000378133 RAPGEF5Q92565 580 aa18.08■□□□□ 0.48
PCDHA1-201ENST00000378133 NOVA2Q9UNW9 492 aaKnown RBP18.08■□□□□ 0.48
PCDHA1-201ENST00000378133 TNS1Q9HBL0 1735 aaKnown RBP18.08■□□□□ 0.48
PCDHA1-201ENST00000378133 HOXA10P31260 410 aaPredicted RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms