RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 KDM3AQ9Y4C1 1321 aa19.62■□□□□ 0.73
GNE-201ENST00000377902 TNRC6CQ9HCJ0 1690 aaKnown RBP19.61■□□□□ 0.73
GNE-201ENST00000377902 GOLGA6L7A0A1B0GV03 622 aa19.61■□□□□ 0.73
GNE-201ENST00000377902 SHBGP04278 402 aa19.61■□□□□ 0.73
GNE-201ENST00000377902 H2AFZP0C0S5 128 aa19.61■□□□□ 0.73
GNE-201ENST00000377902 ABCB4P21439 1286 aa19.61■□□□□ 0.73
GNE-201ENST00000377902 MAP2K2P36507 400 aa19.61■□□□□ 0.73
GNE-201ENST00000377902 MRPL12P52815 198 aaKnown RBP19.61■□□□□ 0.73
GNE-201ENST00000377902 SMTNP53814 917 aa19.61■□□□□ 0.73
GNE-201ENST00000377902 SNAP25P60880 206 aa19.61■□□□□ 0.73
GNE-201ENST00000377902 H2AFVQ71UI9 128 aa19.61■□□□□ 0.73
GNE-201ENST00000377902 ARHGEF1Q92888 912 aaKnown RBP19.61■□□□□ 0.73
GNE-201ENST00000377902 P2RX7Q99572 595 aaKnown RBP19.61■□□□□ 0.73
GNE-201ENST00000377902 DDX4Q9NQI0 724 aaKnown RBP19.61■□□□□ 0.73
GNE-201ENST00000377902 HAUS2Q9NVX0 235 aa19.61■□□□□ 0.73
GNE-201ENST00000377902 PPP1R9AQ9ULJ8 1098 aa19.61■□□□□ 0.73
GNE-201ENST00000377902 FLOT1O75955 427 aa19.61■□□□□ 0.73
GNE-201ENST00000377902 TAL1P17542 331 aaPredicted RBP19.61■□□□□ 0.73
GNE-201ENST00000377902 GALCP54803 685 aa19.61■□□□□ 0.73
GNE-201ENST00000377902 SETQ01105 290 aaPredicted RBP19.61■□□□□ 0.73
GNE-201ENST00000377902 C10orf76Q5T2E6 689 aa19.61■□□□□ 0.73
GNE-201ENST00000377902 UBAP2Q5T6F2 1119 aaKnown RBP19.61■□□□□ 0.73
GNE-201ENST00000377902 DCAF12L1Q5VU92 463 aa19.61■□□□□ 0.73
GNE-201ENST00000377902 RUFY4Q6ZNE9 571 aa19.61■□□□□ 0.73
GNE-201ENST00000377902 CALR3Q96L12 384 aaKnown RBP19.61■□□□□ 0.73
GNE-201ENST00000377902 GCNT4Q9P109 453 aa19.61■□□□□ 0.73
GNE-201ENST00000377902 IGSF9BQ9UPX0 1349 aa19.61■□□□□ 0.73
GNE-201ENST00000377902 FRMD3A2A2Y4 597 aa19.6■□□□□ 0.73
GNE-201ENST00000377902 F8VZ95 297 aa19.6■□□□□ 0.73
GNE-201ENST00000377902 BUB1BO60566 1050 aaPredicted RBP19.6■□□□□ 0.73
GNE-201ENST00000377902 CYP4A11Q02928 519 aa19.6■□□□□ 0.73
GNE-201ENST00000377902 DDR1Q08345 913 aa19.6■□□□□ 0.73
GNE-201ENST00000377902 ZNF211Q13398 564 aaPredicted RBP19.6■□□□□ 0.73
GNE-201ENST00000377902 BIRC3Q13489 604 aa19.6■□□□□ 0.73
GNE-201ENST00000377902 SHROOM1Q2M3G4 852 aaPredicted RBP19.6■□□□□ 0.73
GNE-201ENST00000377902 SLC30A10Q6XR72 485 aa19.6■□□□□ 0.73
GNE-201ENST00000377902 SLFN11Q7Z7L1 901 aa19.6■□□□□ 0.73
GNE-201ENST00000377902 LNX1Q8TBB1 728 aaPredicted RBP19.6■□□□□ 0.73
GNE-201ENST00000377902 GLG1Q92896 1179 aa19.6■□□□□ 0.73
GNE-201ENST00000377902 ATF5Q9Y2D1 282 aaPredicted RBP19.6■□□□□ 0.73
GNE-201ENST00000377902 ARFGEF1Q9Y6D6 1849 aa19.6■□□□□ 0.73
GNE-201ENST00000377902 MPHOSPH10O00566 681 aaKnown RBP19.6■□□□□ 0.73
GNE-201ENST00000377902 CAND2O75155 1236 aa19.6■□□□□ 0.73
GNE-201ENST00000377902 PRR16Q569H4 304 aa19.6■□□□□ 0.73
GNE-201ENST00000377902 AADACL2Q6P093 401 aa19.6■□□□□ 0.73
GNE-201ENST00000377902 FRMD5Q7Z6J6 570 aa19.6■□□□□ 0.73
GNE-201ENST00000377902 GLYCTKQ8IVS8 523 aa19.6■□□□□ 0.73
GNE-201ENST00000377902 RASGEF1CQ8N431 466 aa19.6■□□□□ 0.73
GNE-201ENST00000377902 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.6■□□□□ 0.733e-10■■■■■ 88.3
GNE-201ENST00000377902 ERVK-5Q9HDB9 667 aa19.6■□□□□ 0.73
GNE-201ENST00000377902 PNMA2Q9UL42 364 aa19.6■□□□□ 0.73
GNE-201ENST00000377902 NENFQ9UMX5 172 aa19.6■□□□□ 0.73
GNE-201ENST00000377902 ZBTB5O15062 677 aa19.59■□□□□ 0.73
GNE-201ENST00000377902 RPS6KA4O75676 772 aa19.59■□□□□ 0.73
GNE-201ENST00000377902 TTLL1O95922 423 aa19.59■□□□□ 0.73
GNE-201ENST00000377902 IFI16Q16666 785 aaKnown RBP19.59■□□□□ 0.73
GNE-201ENST00000377902 ANKRD20A8PQ5CZ79 823 aa19.59■□□□□ 0.73
GNE-201ENST00000377902 EIF1ADQ8N9N8 165 aaKnown RBP19.59■□□□□ 0.73
GNE-201ENST00000377902 ATP8B4Q8TF62 1192 aa19.59■□□□□ 0.73
GNE-201ENST00000377902 SLC35C1Q96A29 364 aa19.59■□□□□ 0.73
GNE-201ENST00000377902 KCNMB3Q9NPA1 279 aa19.59■□□□□ 0.73
GNE-201ENST00000377902 TRAF3IP3Q9Y228 551 aa19.59■□□□□ 0.73
GNE-201ENST00000377902 BZW2Q9Y6E2 419 aaKnown RBP19.59■□□□□ 0.73
GNE-201ENST00000377902 SMIM23A6NLE4 172 aa19.59■□□□□ 0.73
GNE-201ENST00000377902 OPLAHO14841 1288 aa19.59■□□□□ 0.73
GNE-201ENST00000377902 JAM2P57087 298 aa19.59■□□□□ 0.73
GNE-201ENST00000377902 IFFO1Q0D2I5 559 aa19.59■□□□□ 0.73
GNE-201ENST00000377902 KSR1Q8IVT5 923 aa19.59■□□□□ 0.73
GNE-201ENST00000377902 SLC35G2Q8TBE7 412 aa19.59■□□□□ 0.73
GNE-201ENST00000377902 HES6Q96HZ4 224 aa19.59■□□□□ 0.73
GNE-201ENST00000377902 GOPCQ9HD26 462 aa19.59■□□□□ 0.73
GNE-201ENST00000377902 SUCLA2Q9P2R7 463 aaPredicted RBP19.59■□□□□ 0.73
GNE-201ENST00000377902 UTP11Q9Y3A2 253 aaKnown RBP19.59■□□□□ 0.73
GNE-201ENST00000377902 DAGLAQ9Y4D2 1042 aa19.59■□□□□ 0.73
GNE-201ENST00000377902 CNTNAP4Q9C0A0 1308 aa19.59■□□□□ 0.73
GNE-201ENST00000377902 ATAD5Q96QE3 1844 aa19.59■□□□□ 0.73
GNE-201ENST00000377902 CCDC188H7C350 402 aa19.58■□□□□ 0.73
GNE-201ENST00000377902 NR3C1P04150 777 aa19.58■□□□□ 0.73
GNE-201ENST00000377902 SPATA31C1P0DKV0 1188 aa19.58■□□□□ 0.73
GNE-201ENST00000377902 PRKCIP41743 596 aa19.58■□□□□ 0.73
GNE-201ENST00000377902 POU5F1Q01860 360 aaKnown RBP19.58■□□□□ 0.73
GNE-201ENST00000377902 GABPAQ06546 454 aa19.58■□□□□ 0.73
GNE-201ENST00000377902 FAM228AQ86W67 206 aa19.58■□□□□ 0.73
GNE-201ENST00000377902 OLIG1Q8TAK6 271 aa19.58■□□□□ 0.73
GNE-201ENST00000377902 CXorf56Q9H5V9 222 aa19.58■□□□□ 0.73
GNE-201ENST00000377902 THRAP3Q9Y2W1 955 aaKnown RBP19.58■□□□□ 0.73
GNE-201ENST00000377902 ASTN1O14525 1302 aa19.58■□□□□ 0.73
GNE-201ENST00000377902 IGKV6D-41A0A0C4DH26 115 aa19.58■□□□□ 0.72
GNE-201ENST00000377902 EVI5O60447 810 aa19.58■□□□□ 0.72
GNE-201ENST00000377902 FAM182BQ5T319 152 aa19.58■□□□□ 0.72
GNE-201ENST00000377902 PPP4R3CPQ6ZMV5 832 aa19.58■□□□□ 0.72
GNE-201ENST00000377902 CPLX4Q7Z7G2 160 aa19.58■□□□□ 0.72
GNE-201ENST00000377902 CCDC26Q8TAB7 109 aa19.58■□□□□ 0.72
GNE-201ENST00000377902 GGA2Q9UJY4 613 aa19.58■□□□□ 0.72
GNE-201ENST00000377902 GCNT3O95395 438 aa19.57■□□□□ 0.72
GNE-201ENST00000377902 GCFC2P16383 781 aaKnown RBP19.57■□□□□ 0.72
GNE-201ENST00000377902 PLCG2P16885 1265 aa19.57■□□□□ 0.72
GNE-201ENST00000377902 SPIRE1Q08AE8 756 aa19.57■□□□□ 0.72
GNE-201ENST00000377902 FAM98CQ17RN3 349 aaKnown RBP19.57■□□□□ 0.72
GNE-201ENST00000377902 AGBL2Q5U5Z8 902 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms