RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 FBXO47Q5MNV8 452 aa13.04□□□□□ -0.32
SMARCE1-203ENST00000377808 TSHZ1Q6ZSZ6 1077 aa13.04□□□□□ -0.32
SMARCE1-203ENST00000377808 DIS3L2Q8IYB7 885 aaKnown RBP13.04□□□□□ -0.32
SMARCE1-203ENST00000377808 FAM184AQ8NB25 1140 aa13.04□□□□□ -0.32
SMARCE1-203ENST00000377808 ETNPPLQ8TBG4 499 aa13.04□□□□□ -0.32
SMARCE1-203ENST00000377808 ZSCAN31Q96LW9 406 aaPredicted RBP13.04□□□□□ -0.32
SMARCE1-203ENST00000377808 RAD9AQ99638 391 aa13.04□□□□□ -0.32
SMARCE1-203ENST00000377808 KIF2CQ99661 725 aa13.04□□□□□ -0.32
SMARCE1-203ENST00000377808 SH2B1Q9NRF2 756 aaPredicted RBP13.04□□□□□ -0.32
SMARCE1-203ENST00000377808 NRBP2Q9NSY0 501 aa13.04□□□□□ -0.32
SMARCE1-203ENST00000377808 SEPT9Q9UHD8 586 aaPredicted RBP13.04□□□□□ -0.32
SMARCE1-203ENST00000377808 MTUS1Q9ULD2 1270 aa13.04□□□□□ -0.32
SMARCE1-203ENST00000377808 BTBD18B2RXH4 712 aa13.03□□□□□ -0.32
SMARCE1-203ENST00000377808 RFXAPO00287 272 aa13.03□□□□□ -0.32
SMARCE1-203ENST00000377808 ST18O60284 1047 aa13.03□□□□□ -0.32
SMARCE1-203ENST00000377808 ARHGEF15O94989 841 aa13.03□□□□□ -0.32
SMARCE1-203ENST00000377808 C22orf31O95567 290 aa13.03□□□□□ -0.32
SMARCE1-203ENST00000377808 ATP2B1P20020 1258 aa13.03□□□□□ -0.32
SMARCE1-203ENST00000377808 CD52P31358 61 aa13.03□□□□□ -0.32
SMARCE1-203ENST00000377808 RBM25P49756 843 aaKnown RBP13.03□□□□□ -0.32
SMARCE1-203ENST00000377808 PAK2Q13177 524 aa13.03□□□□□ -0.32
SMARCE1-203ENST00000377808 GNL2Q13823 731 aaKnown RBP13.03□□□□□ -0.32
SMARCE1-203ENST00000377808 RABEP1Q15276 862 aa13.03□□□□□ -0.32
SMARCE1-203ENST00000377808 NME8Q8N427 588 aa13.03□□□□□ -0.32
SMARCE1-203ENST00000377808 BANK1Q8NDB2 785 aa13.03□□□□□ -0.32
SMARCE1-203ENST00000377808 C8orf76Q96K31 380 aa13.03□□□□□ -0.32
SMARCE1-203ENST00000377808 MBOAT7Q96N66 472 aa13.03□□□□□ -0.32
SMARCE1-203ENST00000377808 YME1L1Q96TA2 773 aa13.03□□□□□ -0.32
SMARCE1-203ENST00000377808 CELF4Q9BZC1 486 aaKnown RBP13.03□□□□□ -0.32
SMARCE1-203ENST00000377808 AKT3Q9Y243 479 aa13.03□□□□□ -0.32
SMARCE1-203ENST00000377808 PTPRSQ13332 1948 aa13.03□□□□□ -0.32
SMARCE1-203ENST00000377808 MYH9P35579 1960 aaKnown RBP13.03□□□□□ -0.32
SMARCE1-203ENST00000377808 MICAL3Q7RTP6 2002 aa13.03□□□□□ -0.32
SMARCE1-203ENST00000377808 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.02□□□□□ -0.33
SMARCE1-203ENST00000377808 ZBTB42B2RXF5 422 aa13.02□□□□□ -0.33
SMARCE1-203ENST00000377808 ZNF862O60290 1169 aa13.02□□□□□ -0.33
SMARCE1-203ENST00000377808 BAG4O95429 457 aaKnown RBP13.02□□□□□ -0.33
SMARCE1-203ENST00000377808 VTNP04004 478 aa13.02□□□□□ -0.33
SMARCE1-203ENST00000377808 CLCN3P51790 818 aa13.02□□□□□ -0.33
SMARCE1-203ENST00000377808 TAP1Q03518 808 aa13.02□□□□□ -0.33
SMARCE1-203ENST00000377808 NFX1Q12986 1120 aaKnown RBP13.02□□□□□ -0.33
SMARCE1-203ENST00000377808 CCDC85BQ15834 202 aaPredicted RBP13.02□□□□□ -0.33
SMARCE1-203ENST00000377808 TMEM266Q2M3C6 531 aa13.02□□□□□ -0.33
SMARCE1-203ENST00000377808 MTERF2Q49AM1 385 aa13.02□□□□□ -0.33
SMARCE1-203ENST00000377808 NCAPH2Q6IBW4 605 aa13.02□□□□□ -0.33
SMARCE1-203ENST00000377808 PPP4R3AQ6IN85 833 aa13.02□□□□□ -0.33
SMARCE1-203ENST00000377808 LRRC71Q8N4P6 559 aa13.02□□□□□ -0.33
SMARCE1-203ENST00000377808 RDM1Q8NG50 284 aa13.02□□□□□ -0.33
SMARCE1-203ENST00000377808 SCLT1Q96NL6 688 aa13.02□□□□□ -0.33
SMARCE1-203ENST00000377808 MAP7D2Q96T17 732 aa13.02□□□□□ -0.33
SMARCE1-203ENST00000377808 LLPHQ9BRT6 129 aaKnown RBP13.02□□□□□ -0.33
SMARCE1-203ENST00000377808 AGO3Q9H9G7 860 aaKnown RBP13.02□□□□□ -0.33
SMARCE1-203ENST00000377808 SUGCTQ9HAC7 445 aa13.02□□□□□ -0.33
SMARCE1-203ENST00000377808 SIP14410 1827 aa13.02□□□□□ -0.33
SMARCE1-203ENST00000377808 DDX11L8A8MPP1 907 aa13.01□□□□□ -0.33
SMARCE1-203ENST00000377808 TMOD1P28289 359 aa13.01□□□□□ -0.33
SMARCE1-203ENST00000377808 HMGN5P82970 282 aaKnown RBP13.01□□□□□ -0.33
SMARCE1-203ENST00000377808 TBC1D8BQ0IIM8 1120 aa13.01□□□□□ -0.33
SMARCE1-203ENST00000377808 ADGRE1Q14246 886 aa13.01□□□□□ -0.33
SMARCE1-203ENST00000377808 KIZQ2M2Z5 673 aa13.01□□□□□ -0.33
SMARCE1-203ENST00000377808 EFCAB12Q6NXP0 572 aa13.01□□□□□ -0.33
SMARCE1-203ENST00000377808 SPRED2Q7Z698 418 aa13.01□□□□□ -0.33
SMARCE1-203ENST00000377808 KIAA0319LQ8IZA0 1049 aa13.01□□□□□ -0.33
SMARCE1-203ENST00000377808 TNFRSF25Q93038 417 aa13.01□□□□□ -0.33
SMARCE1-203ENST00000377808 FAM20AQ96MK3 541 aa13.01□□□□□ -0.33
SMARCE1-203ENST00000377808 OSMRQ99650 979 aa13.01□□□□□ -0.33
SMARCE1-203ENST00000377808 SH2D3AQ9BRG2 576 aa13.01□□□□□ -0.33
SMARCE1-203ENST00000377808 KCNMB3Q9NPA1 279 aa13.01□□□□□ -0.33
SMARCE1-203ENST00000377808 INSL6Q9Y581 213 aa13.01□□□□□ -0.33
SMARCE1-203ENST00000377808 TMEM150BA6NC51 233 aa13□□□□□ -0.33
SMARCE1-203ENST00000377808 EPOPA6NHQ4 379 aa13□□□□□ -0.33
SMARCE1-203ENST00000377808 EML1O00423 815 aa13□□□□□ -0.33
SMARCE1-203ENST00000377808 MAGEB2O15479 319 aa13□□□□□ -0.33
SMARCE1-203ENST00000377808 GTPBP6O43824 516 aaPredicted RBP13□□□□□ -0.33
SMARCE1-203ENST00000377808 NEMFO60524 1076 aa13□□□□□ -0.33
SMARCE1-203ENST00000377808 RPS6KA5O75582 802 aa13□□□□□ -0.33
SMARCE1-203ENST00000377808 PSMC5P62195 406 aa13□□□□□ -0.33
SMARCE1-203ENST00000377808 MKRN4PQ13434 485 aaPredicted RBP13□□□□□ -0.33
SMARCE1-203ENST00000377808 CALCRLQ16602 461 aa13□□□□□ -0.33
SMARCE1-203ENST00000377808 PHF6Q8IWS0 365 aaKnown RBP eCLIP13□□□□□ -0.33
SMARCE1-203ENST00000377808 SLFN12Q8IYM2 578 aa13□□□□□ -0.33
SMARCE1-203ENST00000377808 USP38Q8NB14 1042 aa13□□□□□ -0.33
SMARCE1-203ENST00000377808 GDPD5Q8WTR4 605 aa13□□□□□ -0.33
SMARCE1-203ENST00000377808 TOP1MTQ969P6 601 aa13□□□□□ -0.33
SMARCE1-203ENST00000377808 ZNF668Q96K58 619 aaPredicted RBP13□□□□□ -0.33
SMARCE1-203ENST00000377808 TGS1Q96RS0 853 aaKnown RBP13□□□□□ -0.33
SMARCE1-203ENST00000377808 VAV3Q9UKW4 847 aa13□□□□□ -0.33
SMARCE1-203ENST00000377808 PADI3Q9ULW8 664 aa13□□□□□ -0.33
SMARCE1-203ENST00000377808 EYSQ5T1H1 3165 aa12.99□□□□□ -0.33
SMARCE1-203ENST00000377808 LINC01553A4QN01 128 aa12.99□□□□□ -0.33
SMARCE1-203ENST00000377808 ENPP3O14638 875 aa12.99□□□□□ -0.33
SMARCE1-203ENST00000377808 TBX3O15119 743 aa12.99□□□□□ -0.33
SMARCE1-203ENST00000377808 PPP2R5CQ13362 524 aa12.99□□□□□ -0.33
SMARCE1-203ENST00000377808 SKIV2LQ15477 1246 aaKnown RBP12.99□□□□□ -0.33
SMARCE1-203ENST00000377808 XKR3Q5GH77 459 aa12.99□□□□□ -0.33
SMARCE1-203ENST00000377808 PLA2G4FQ68DD2 849 aa12.99□□□□□ -0.33
SMARCE1-203ENST00000377808 HAS1Q92839 578 aa12.99□□□□□ -0.33
SMARCE1-203ENST00000377808 FTHL17Q9BXU8 183 aa12.99□□□□□ -0.33
SMARCE1-203ENST00000377808 CDHR5Q9HBB8 845 aa12.99□□□□□ -0.33
SMARCE1-203ENST00000377808 NOC2LQ9Y3T9 749 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms