RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 AFDNP55196 1824 aaKnown RBP15.76■□□□□ 0.11
TCOF1-202ENST00000377797 KIF22Q14807 665 aa15.76■□□□□ 0.11
TCOF1-202ENST00000377797 FAM167AQ96KS9 214 aa15.76■□□□□ 0.11
TCOF1-202ENST00000377797 DNAJC12Q9UKB3 198 aa15.76■□□□□ 0.11
TCOF1-202ENST00000377797 PPP1R3GB7ZBB8 358 aa15.76■□□□□ 0.11
TCOF1-202ENST00000377797 ICAM1P05362 532 aa15.76■□□□□ 0.11
TCOF1-202ENST00000377797 CATSPER3Q86XQ3 398 aa15.76■□□□□ 0.11
TCOF1-202ENST00000377797 DDX41Q9UJV9 622 aaKnown RBP15.76■□□□□ 0.11
TCOF1-202ENST00000377797 BRD3Q15059 726 aa15.75■□□□□ 0.11
TCOF1-202ENST00000377797 SLFN12LQ6IEE8 588 aa15.75■□□□□ 0.11
TCOF1-202ENST00000377797 RABGGTAQ92696 567 aa15.75■□□□□ 0.11
TCOF1-202ENST00000377797 RIT2Q99578 217 aa15.75■□□□□ 0.11
TCOF1-202ENST00000377797 MRIQ9BWK5 157 aa15.75■□□□□ 0.11
TCOF1-202ENST00000377797 KCNH7Q9NS40 1196 aa15.75■□□□□ 0.11
TCOF1-202ENST00000377797 GINM1Q9NU53 330 aa15.75■□□□□ 0.11
TCOF1-202ENST00000377797 ADGRG1Q9Y653 693 aa15.75■□□□□ 0.11
TCOF1-202ENST00000377797 BCL9LQ86UU0 1499 aa15.75■□□□□ 0.11
TCOF1-202ENST00000377797 PDXKO00764 312 aa15.75■□□□□ 0.11
TCOF1-202ENST00000377797 CXCR5P32302 372 aa15.75■□□□□ 0.11
TCOF1-202ENST00000377797 CA8P35219 290 aa15.75■□□□□ 0.11
TCOF1-202ENST00000377797 GRB10Q13322 594 aa15.75■□□□□ 0.11
TCOF1-202ENST00000377797 NR1I3Q14994 352 aa15.75■□□□□ 0.11
TCOF1-202ENST00000377797 Q3C1V9 767 aa15.75■□□□□ 0.11
TCOF1-202ENST00000377797 NLRP7Q8WX94 980 aa15.75■□□□□ 0.11
TCOF1-202ENST00000377797 AKT1S1Q96B36 256 aa15.75■□□□□ 0.11
TCOF1-202ENST00000377797 THNSL1Q8IYQ7 743 aa15.75■□□□□ 0.11
TCOF1-202ENST00000377797 MMP19Q99542 508 aa15.75■□□□□ 0.11
TCOF1-202ENST00000377797 A0A1W2PRG0 241 aa15.75■□□□□ 0.11
TCOF1-202ENST00000377797 FTCDO95954 541 aa15.75■□□□□ 0.11
TCOF1-202ENST00000377797 CAPN2P17655 700 aa15.75■□□□□ 0.11
TCOF1-202ENST00000377797 MTF1Q14872 753 aa15.75■□□□□ 0.11
TCOF1-202ENST00000377797 TAAR1Q96RJ0 339 aa15.75■□□□□ 0.11
TCOF1-202ENST00000377797 NXF1Q9UBU9 619 aaKnown RBP15.75■□□□□ 0.11
TCOF1-202ENST00000377797 TRIM49P0CI25 452 aa15.74■□□□□ 0.11
TCOF1-202ENST00000377797 TRIM49CP0CI26 452 aa15.74■□□□□ 0.11
TCOF1-202ENST00000377797 NAA35Q5VZE5 725 aa15.74■□□□□ 0.11
TCOF1-202ENST00000377797 ANKRD36BP1Q96IX9 119 aa15.74■□□□□ 0.11
TCOF1-202ENST00000377797 JRKLQ9Y4A0 524 aa15.74■□□□□ 0.11
TCOF1-202ENST00000377797 MYO1FO00160 1098 aa15.74■□□□□ 0.11
TCOF1-202ENST00000377797 CLUL1Q15846 466 aa15.74■□□□□ 0.11
TCOF1-202ENST00000377797 SESTD1Q86VW0 696 aa15.74■□□□□ 0.11
TCOF1-202ENST00000377797 ZNF354CQ86Y25 554 aa15.74■□□□□ 0.11
TCOF1-202ENST00000377797 ZNF653Q96CK0 615 aa15.74■□□□□ 0.11
TCOF1-202ENST00000377797 ABT1Q9ULW3 272 aaKnown RBP15.74■□□□□ 0.11
TCOF1-202ENST00000377797 SREBF1P36956 1147 aa15.74■□□□□ 0.11
TCOF1-202ENST00000377797 PSPC1Q8WXF1 523 aaKnown RBP15.74■□□□□ 0.11
TCOF1-202ENST00000377797 LRRC45Q96CN5 670 aa15.74■□□□□ 0.11
TCOF1-202ENST00000377797 CLDN3O15551 220 aa15.74■□□□□ 0.11
TCOF1-202ENST00000377797 TTLL4Q14679 1199 aa15.74■□□□□ 0.11
TCOF1-202ENST00000377797 MAPK6Q16659 721 aa15.74■□□□□ 0.11
TCOF1-202ENST00000377797 CYFIP1Q7L576 1253 aa15.74■□□□□ 0.11
TCOF1-202ENST00000377797 TTC16Q8NEE8 873 aa15.74■□□□□ 0.11
TCOF1-202ENST00000377797 TCP11Q8WWU5 503 aa15.74■□□□□ 0.11
TCOF1-202ENST00000377797 MTRQ99707 1265 aa15.74■□□□□ 0.11
TCOF1-202ENST00000377797 FAM213AQ9BRX8 229 aa15.74■□□□□ 0.11
TCOF1-202ENST00000377797 FAM49AQ9H0Q0 323 aaPredicted RBP15.74■□□□□ 0.11
TCOF1-202ENST00000377797 KBTBD4Q9NVX7 518 aa15.74■□□□□ 0.11
TCOF1-202ENST00000377797 TAL1P17542 331 aaPredicted RBP15.73■□□□□ 0.11
TCOF1-202ENST00000377797 FXR1P51114 621 aaKnown RBP eCLIP15.73■□□□□ 0.11
TCOF1-202ENST00000377797 BACE1P56817 501 aa15.73■□□□□ 0.11
TCOF1-202ENST00000377797 AMIGO3Q86WK7 504 aa15.73■□□□□ 0.11
TCOF1-202ENST00000377797 CD44P16070 742 aaKnown RBP15.73■□□□□ 0.11
TCOF1-202ENST00000377797 CCZ1BP86790 482 aa15.73■□□□□ 0.11
TCOF1-202ENST00000377797 CCZ1P86791 482 aaPredicted RBP15.73■□□□□ 0.11
TCOF1-202ENST00000377797 ARFGAP2Q8N6H7 521 aa15.73■□□□□ 0.11
TCOF1-202ENST00000377797 ATRIPQ8WXE1 791 aa15.73■□□□□ 0.11
TCOF1-202ENST00000377797 ODF2LQ9ULJ1 636 aa15.73■□□□□ 0.11
TCOF1-202ENST00000377797 POLR2BP30876 1174 aaKnown RBP15.73■□□□□ 0.11
TCOF1-202ENST00000377797 SAAL1Q96ER3 474 aa15.73■□□□□ 0.11
TCOF1-202ENST00000377797 MOXD1Q6UVY6 613 aa15.73■□□□□ 0.11
TCOF1-202ENST00000377797 ZNF668Q96K58 619 aaPredicted RBP15.73■□□□□ 0.11
TCOF1-202ENST00000377797 FAM81BQ96LP2 452 aa15.73■□□□□ 0.11
TCOF1-202ENST00000377797 POLR3FQ9H1D9 316 aaPredicted RBP15.73■□□□□ 0.11
TCOF1-202ENST00000377797 VPS33BQ9H267 617 aa15.73■□□□□ 0.11
TCOF1-202ENST00000377797 HESX1Q9UBX0 185 aa15.73■□□□□ 0.11
TCOF1-202ENST00000377797 CAPN11Q9UMQ6 739 aa15.73■□□□□ 0.11
TCOF1-202ENST00000377797 GOLGA6BA6NDN3 693 aa15.72■□□□□ 0.11
TCOF1-202ENST00000377797 THAP12O43422 761 aa15.72■□□□□ 0.11
TCOF1-202ENST00000377797 ZEB2O60315 1214 aa15.72■□□□□ 0.11
TCOF1-202ENST00000377797 LDHAP00338 332 aaKnown RBP15.72■□□□□ 0.11
TCOF1-202ENST00000377797 VAMP7P51809 220 aa15.72■□□□□ 0.11
TCOF1-202ENST00000377797 TKFCQ3LXA3 575 aa15.72■□□□□ 0.11
TCOF1-202ENST00000377797 ANKRD13AQ8IZ07 590 aa15.72■□□□□ 0.11
TCOF1-202ENST00000377797 SLC26A4O43511 780 aa15.72■□□□□ 0.11
TCOF1-202ENST00000377797 VIL1P09327 827 aaKnown RBP15.72■□□□□ 0.11
TCOF1-202ENST00000377797 FGRP09769 529 aa15.72■□□□□ 0.11
TCOF1-202ENST00000377797 PITPNM2Q9BZ72 1349 aa15.72■□□□□ 0.11
TCOF1-202ENST00000377797 GOLGA6L7A0A1B0GV03 622 aa15.72■□□□□ 0.11
TCOF1-202ENST00000377797 GAS8O95995 478 aa15.72■□□□□ 0.11
TCOF1-202ENST00000377797 COPB2P35606 906 aa15.72■□□□□ 0.11
TCOF1-202ENST00000377797 MMP14P50281 582 aa15.72■□□□□ 0.11
TCOF1-202ENST00000377797 C10orf76Q5T2E6 689 aa15.72■□□□□ 0.11
TCOF1-202ENST00000377797 FAM76AQ8TAV0 307 aa15.72■□□□□ 0.11
TCOF1-202ENST00000377797 SPATA33Q96N06 139 aa15.72■□□□□ 0.11
TCOF1-202ENST00000377797 BEGAINQ9BUH8 593 aa15.72■□□□□ 0.11
TCOF1-202ENST00000377797 STMN4Q9H169 189 aaPredicted RBP15.72■□□□□ 0.11
TCOF1-202ENST00000377797 RGPD5Q99666 1765 aa15.72■□□□□ 0.11
TCOF1-202ENST00000377797 MED24O75448 989 aa15.72■□□□□ 0.11
TCOF1-202ENST00000377797 GGPS1O95749 300 aa15.72■□□□□ 0.11
TCOF1-202ENST00000377797 CD58P19256 250 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms