RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 USP17L6PQ6QN14 398 aa11.68□□□□□ -0.54
HIF3A-205ENST00000377670 SPATS2LQ9NUQ6 558 aaKnown RBP11.68□□□□□ -0.54
HIF3A-205ENST00000377670 LUC7L3O95232 432 aaKnown RBP11.67□□□□□ -0.54
HIF3A-205ENST00000377670 KRT17Q04695 432 aa11.67□□□□□ -0.54
HIF3A-205ENST00000377670 IFT88Q13099 833 aa11.67□□□□□ -0.54
HIF3A-205ENST00000377670 PHLDB3Q6NSJ2 640 aa11.67□□□□□ -0.54
HIF3A-205ENST00000377670 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.67□□□□□ -0.54
HIF3A-205ENST00000377670 CHMP6Q96FZ7 201 aa11.67□□□□□ -0.54
HIF3A-205ENST00000377670 SAMSN1Q9NSI8 373 aaKnown RBP11.67□□□□□ -0.54
HIF3A-205ENST00000377670 RAB20Q9NX57 234 aa11.67□□□□□ -0.54
HIF3A-205ENST00000377670 TMEM260Q9NX78 707 aa11.67□□□□□ -0.54
HIF3A-205ENST00000377670 PHLPP2Q6ZVD8 1323 aa11.67□□□□□ -0.54
HIF3A-205ENST00000377670 SMIM24O75264 130 aa11.67□□□□□ -0.54
HIF3A-205ENST00000377670 TXNP10599 105 aaKnown RBP11.67□□□□□ -0.54
HIF3A-205ENST00000377670 COG7P83436 770 aa11.67□□□□□ -0.54
HIF3A-205ENST00000377670 ARHGAP4P98171 946 aa11.67□□□□□ -0.54
HIF3A-205ENST00000377670 SAMD7Q7Z3H4 446 aa11.67□□□□□ -0.54
HIF3A-205ENST00000377670 ANKRD13CQ8N6S4 541 aa11.67□□□□□ -0.54
HIF3A-205ENST00000377670 LSM14BQ9BX40 385 aaKnown RBP11.67□□□□□ -0.54
HIF3A-205ENST00000377670 NUCKS1Q9H1E3 243 aaKnown RBP11.67□□□□□ -0.54
HIF3A-205ENST00000377670 IFT122Q9HBG6 1241 aa11.67□□□□□ -0.54
HIF3A-205ENST00000377670 TRIM17Q9Y577 477 aa11.67□□□□□ -0.54
HIF3A-205ENST00000377670 ITSN1Q15811 1721 aa11.67□□□□□ -0.54
HIF3A-205ENST00000377670 ABCB11O95342 1321 aa11.67□□□□□ -0.54
HIF3A-205ENST00000377670 PNMA6FA0A0J9YX94 578 aa11.67□□□□□ -0.54
HIF3A-205ENST00000377670 KDM4FA0A1W2PPD8 638 aa11.67□□□□□ -0.54
HIF3A-205ENST00000377670 ARHGAP42A6NI28 874 aa11.67□□□□□ -0.54
HIF3A-205ENST00000377670 TROVE2P10155 538 aaKnown RBP eCLIP11.67□□□□□ -0.54
HIF3A-205ENST00000377670 MAN1A1P33908 653 aa11.67□□□□□ -0.54
HIF3A-205ENST00000377670 COG2Q14746 738 aa11.67□□□□□ -0.54
HIF3A-205ENST00000377670 E2F4Q16254 413 aa11.67□□□□□ -0.54
HIF3A-205ENST00000377670 INTS5Q6P9B9 1019 aaKnown RBP11.67□□□□□ -0.54
HIF3A-205ENST00000377670 ZNF280CQ8ND82 737 aa11.67□□□□□ -0.54
HIF3A-205ENST00000377670 DPH5Q9H2P9 285 aa11.67□□□□□ -0.54
HIF3A-205ENST00000377670 GOLPH3LQ9H4A5 285 aa11.67□□□□□ -0.54
HIF3A-205ENST00000377670 DYRK4Q9NR20 520 aa11.67□□□□□ -0.54
HIF3A-205ENST00000377670 K7ERI5 159 aa11.67□□□□□ -0.54
HIF3A-205ENST00000377670 CSF1RP07333 972 aa11.67□□□□□ -0.54
HIF3A-205ENST00000377670 TMTC3Q6ZXV5 915 aa11.67□□□□□ -0.54
HIF3A-205ENST00000377670 RSAD2Q8WXG1 361 aa11.67□□□□□ -0.54
HIF3A-205ENST00000377670 RABGGTAQ92696 567 aa11.67□□□□□ -0.54
HIF3A-205ENST00000377670 TTC25Q96NG3 672 aa11.67□□□□□ -0.54
HIF3A-205ENST00000377670 A0A1W2PQ27 194 aa11.66□□□□□ -0.54
HIF3A-205ENST00000377670 A0A1W2PQ64 194 aa11.66□□□□□ -0.54
HIF3A-205ENST00000377670 A0A1W2PQD8 194 aa11.66□□□□□ -0.54
HIF3A-205ENST00000377670 KRIT1O00522 736 aa11.66□□□□□ -0.54
HIF3A-205ENST00000377670 PPP6R2O75170 966 aa11.66□□□□□ -0.54
HIF3A-205ENST00000377670 ATP1A3P13637 1013 aa11.66□□□□□ -0.54
HIF3A-205ENST00000377670 GAP43P17677 238 aa11.66□□□□□ -0.54
HIF3A-205ENST00000377670 OR8K1Q8NGG5 319 aa11.66□□□□□ -0.54
HIF3A-205ENST00000377670 NSUN4Q96CB9 384 aaKnown RBP11.66□□□□□ -0.54
HIF3A-205ENST00000377670 TACC3Q9Y6A5 838 aa11.66□□□□□ -0.54
HIF3A-205ENST00000377670 MYO5BQ9ULV0 1848 aa11.66□□□□□ -0.54
HIF3A-205ENST00000377670 ARHGEF28Q8N1W1 1705 aaKnown RBP11.66□□□□□ -0.54
HIF3A-205ENST00000377670 LRRD1A4D1F6 860 aa11.66□□□□□ -0.54
HIF3A-205ENST00000377670 S100BP04271 92 aaPredicted RBP11.66□□□□□ -0.54
HIF3A-205ENST00000377670 CTSHP09668 335 aa11.66□□□□□ -0.54
HIF3A-205ENST00000377670 CCDC13Q8IYE1 715 aa11.66□□□□□ -0.54
HIF3A-205ENST00000377670 OR6B3Q8NGW1 331 aa11.66□□□□□ -0.54
HIF3A-205ENST00000377670 UHMK1Q8TAS1 419 aaKnown RBP11.66□□□□□ -0.54
HIF3A-205ENST00000377670 ZNF302Q9NR11 478 aa11.66□□□□□ -0.54
HIF3A-205ENST00000377670 MAN1B1Q9UKM7 699 aa11.66□□□□□ -0.54
HIF3A-205ENST00000377670 ABCB4P21439 1286 aa11.66□□□□□ -0.54
HIF3A-205ENST00000377670 LONP1P36776 959 aaKnown RBP11.66□□□□□ -0.54
HIF3A-205ENST00000377670 TBC1D16Q8TBP0 767 aa11.66□□□□□ -0.54
HIF3A-205ENST00000377670 ARMCX3Q9UH62 379 aaPredicted RBP11.66□□□□□ -0.54
HIF3A-205ENST00000377670 SFI1A8K8P3 1242 aa11.66□□□□□ -0.54
HIF3A-205ENST00000377670 IGFBP4P22692 258 aa11.66□□□□□ -0.54
HIF3A-205ENST00000377670 RASIP1Q5U651 963 aa11.66□□□□□ -0.54
HIF3A-205ENST00000377670 MROH7-TTC4A0A0A0MT08 1334 aa11.66□□□□□ -0.54
HIF3A-205ENST00000377670 CLIC2O15247 247 aa11.66□□□□□ -0.54
HIF3A-205ENST00000377670 FAM26FQ5R3K3 315 aa11.66□□□□□ -0.54
HIF3A-205ENST00000377670 SDE2Q6IQ49 451 aa11.66□□□□□ -0.54
HIF3A-205ENST00000377670 TTBK2Q6IQ55 1244 aa11.66□□□□□ -0.54
HIF3A-205ENST00000377670 TRAPPC3O43617 180 aa11.65□□□□□ -0.54
HIF3A-205ENST00000377670 STAT1P42224 750 aa11.65□□□□□ -0.54
HIF3A-205ENST00000377670 SH2D4BQ5SQS7 431 aa11.65□□□□□ -0.54
HIF3A-205ENST00000377670 LARP4BQ92615 738 aaKnown RBP11.65□□□□□ -0.54
HIF3A-205ENST00000377670 PGBD4Q96DM1 585 aa11.65□□□□□ -0.54
HIF3A-205ENST00000377670 HOMER3Q9NSC5 361 aa11.65□□□□□ -0.54
HIF3A-205ENST00000377670 DEPDC5O75140 1603 aa11.65□□□□□ -0.54
HIF3A-205ENST00000377670 FAM205CA6NFA0 338 aa11.65□□□□□ -0.54
HIF3A-205ENST00000377670 PP2D1A8MPX8 630 aa11.65□□□□□ -0.54
HIF3A-205ENST00000377670 HUS1O60921 280 aa11.65□□□□□ -0.54
HIF3A-205ENST00000377670 PLCG1P19174 1290 aa11.65□□□□□ -0.54
HIF3A-205ENST00000377670 CDC25BP30305 580 aa11.65□□□□□ -0.54
HIF3A-205ENST00000377670 ATN1P54259 1190 aaPredicted RBP11.65□□□□□ -0.54
HIF3A-205ENST00000377670 BPIFB4P59827 614 aa11.65□□□□□ -0.54
HIF3A-205ENST00000377670 GNASQ5JWF2 1037 aa11.65□□□□□ -0.54
HIF3A-205ENST00000377670 AFG1LQ8WV93 481 aa11.65□□□□□ -0.54
HIF3A-205ENST00000377670 NT5C1BQ96P26 610 aa11.65□□□□□ -0.54
HIF3A-205ENST00000377670 MMTAG2Q9BU76 263 aaKnown RBP11.65□□□□□ -0.54
HIF3A-205ENST00000377670 MSTO1Q9BUK6 570 aa11.65□□□□□ -0.54
HIF3A-205ENST00000377670 ZNF70Q9UC06 446 aaPredicted RBP11.65□□□□□ -0.54
HIF3A-205ENST00000377670 AMFRQ9UKV5 643 aa11.65□□□□□ -0.54
HIF3A-205ENST00000377670 POTEMA6NI47 508 aa11.65□□□□□ -0.54
HIF3A-205ENST00000377670 ATP8B1O43520 1251 aa11.65□□□□□ -0.54
HIF3A-205ENST00000377670 PTK2Q05397 1052 aa11.65□□□□□ -0.54
HIF3A-205ENST00000377670 ADAM9Q13443 819 aa11.65□□□□□ -0.54
HIF3A-205ENST00000377670 MAP7D3Q8IWC1 876 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms