RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 MGAT3Q09327 533 aa24.84■■□□□ 1.57
SRM-201ENST00000376957 TBC1D8BQ0IIM8 1120 aa24.84■■□□□ 1.57
SRM-201ENST00000376957 FBXO47Q5MNV8 452 aa24.84■■□□□ 1.57
SRM-201ENST00000376957 EXOC8Q8IYI6 725 aa24.84■■□□□ 1.57
SRM-201ENST00000376957 MYOCDQ8IZQ8 938 aa24.84■■□□□ 1.57
SRM-201ENST00000376957 RAD9AQ99638 391 aa24.84■■□□□ 1.57
SRM-201ENST00000376957 FTHL17Q9BXU8 183 aa24.84■■□□□ 1.57
SRM-201ENST00000376957 NOL7Q9UMY1 257 aaKnown RBP24.84■■□□□ 1.57
SRM-201ENST00000376957 INSL6Q9Y581 213 aa24.84■■□□□ 1.57
SRM-201ENST00000376957 KDM3AQ9Y4C1 1321 aa24.84■■□□□ 1.57
SRM-201ENST00000376957 GJB5O95377 273 aa24.83■■□□□ 1.57
SRM-201ENST00000376957 C22orf31O95567 290 aa24.83■■□□□ 1.57
SRM-201ENST00000376957 CA3P07451 260 aa24.83■■□□□ 1.57
SRM-201ENST00000376957 FOSL2P15408 326 aa24.83■■□□□ 1.57
SRM-201ENST00000376957 QARSP47897 775 aaKnown RBP24.83■■□□□ 1.57
SRM-201ENST00000376957 DNM2P50570 870 aa24.83■■□□□ 1.57
SRM-201ENST00000376957 TMEM62Q0P6H9 643 aa24.83■■□□□ 1.57
SRM-201ENST00000376957 LPIN1Q14693 890 aa24.83■■□□□ 1.57
SRM-201ENST00000376957 EARS2Q5JPH6 523 aaKnown RBP24.83■■□□□ 1.57
SRM-201ENST00000376957 B3GNT9Q6UX72 402 aa24.83■■□□□ 1.57
SRM-201ENST00000376957 POTEDQ86YR6 584 aa24.83■■□□□ 1.57
SRM-201ENST00000376957 JPH2Q9BR39 696 aaPredicted RBP24.83■■□□□ 1.57
SRM-201ENST00000376957 SEPT9Q9UHD8 586 aaPredicted RBP24.83■■□□□ 1.57
SRM-201ENST00000376957 GINS2Q9Y248 185 aa24.83■■□□□ 1.57
SRM-201ENST00000376957 YBX2Q9Y2T7 364 aaKnown RBP24.83■■□□□ 1.57
SRM-201ENST00000376957 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.83■■□□□ 1.57
SRM-201ENST00000376957 P4HBP07237 508 aaKnown RBP24.82■■□□□ 1.56
SRM-201ENST00000376957 DEFB103AP81534 67 aa24.82■■□□□ 1.56
SRM-201ENST00000376957 CDC42EP1Q00587 391 aa24.82■■□□□ 1.56
SRM-201ENST00000376957 PAK2Q13177 524 aa24.82■■□□□ 1.56
SRM-201ENST00000376957 ORC2Q13416 577 aaPredicted RBP24.82■■□□□ 1.56
SRM-201ENST00000376957 GRIN2CQ14957 1233 aa24.82■■□□□ 1.56
SRM-201ENST00000376957 EFCAB12Q6NXP0 572 aa24.82■■□□□ 1.56
SRM-201ENST00000376957 GBF1Q92538 1859 aa24.82■■□□□ 1.56
SRM-201ENST00000376957 ZBTB10Q96DT7 871 aa24.82■■□□□ 1.56
SRM-201ENST00000376957 TMX3Q96JJ7 454 aa24.82■■□□□ 1.56
SRM-201ENST00000376957 NIFKQ9BYG3 293 aaKnown RBP24.82■■□□□ 1.56
SRM-201ENST00000376957 RNF216Q9NWF9 866 aaPredicted RBP24.82■■□□□ 1.56
SRM-201ENST00000376957 LAMA2P24043 3122 aaKnown RBP24.81■■□□□ 1.56
SRM-201ENST00000376957 WDR81Q562E7 1941 aa24.81■■□□□ 1.56
SRM-201ENST00000376957 FAM205CA6NFA0 338 aa24.81■■□□□ 1.56
SRM-201ENST00000376957 DDX11L8A8MPP1 907 aa24.81■■□□□ 1.56
SRM-201ENST00000376957 ZBTB42B2RXF5 422 aa24.81■■□□□ 1.56
SRM-201ENST00000376957 ZNF862O60290 1169 aa24.81■■□□□ 1.56
SRM-201ENST00000376957 EPHA7Q15375 998 aa24.81■■□□□ 1.56
SRM-201ENST00000376957 NCAPH2Q6IBW4 605 aa24.81■■□□□ 1.56
SRM-201ENST00000376957 OTUD6AQ7L8S5 288 aa24.81■■□□□ 1.56
SRM-201ENST00000376957 KIAA0319LQ8IZA0 1049 aa24.81■■□□□ 1.56
SRM-201ENST00000376957 HAS1Q92839 578 aa24.81■■□□□ 1.56
SRM-201ENST00000376957 VAV3Q9UKW4 847 aa24.81■■□□□ 1.56
SRM-201ENST00000376957 AKT3Q9Y243 479 aa24.81■■□□□ 1.56
SRM-201ENST00000376957 PPME1Q9Y570 386 aa24.81■■□□□ 1.56
SRM-201ENST00000376957 GTF3C3Q9Y5Q9 886 aa24.81■■□□□ 1.56
SRM-201ENST00000376957 GPR182O15218 404 aa24.8■■□□□ 1.56
SRM-201ENST00000376957 MYOGP15173 224 aa24.8■■□□□ 1.56
SRM-201ENST00000376957 ATP2B1P20020 1258 aa24.8■■□□□ 1.56
SRM-201ENST00000376957 UGCGQ16739 394 aa24.8■■□□□ 1.56
SRM-201ENST00000376957 NOSTRINQ8IVI9 506 aa24.8■■□□□ 1.56
SRM-201ENST00000376957 BANK1Q8NDB2 785 aa24.8■■□□□ 1.56
SRM-201ENST00000376957 MYLIPQ8WY64 445 aa24.8■■□□□ 1.56
SRM-201ENST00000376957 BACH2Q9BYV9 841 aa24.8■■□□□ 1.56
SRM-201ENST00000376957 TTC12Q9H892 705 aaPredicted RBP24.8■■□□□ 1.56
SRM-201ENST00000376957 SUGCTQ9HAC7 445 aa24.8■■□□□ 1.56
SRM-201ENST00000376957 MCM7P33993 719 aa24.79■■□□□ 1.56
SRM-201ENST00000376957 TRAPPC10P48553 1259 aa24.79■■□□□ 1.56
SRM-201ENST00000376957 CRYBB1P53674 252 aaPredicted RBP24.79■■□□□ 1.56
SRM-201ENST00000376957 MTERF2Q49AM1 385 aa24.79■■□□□ 1.56
SRM-201ENST00000376957 FAM117BQ6P1L5 589 aa24.79■■□□□ 1.56
SRM-201ENST00000376957 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.79■■□□□ 1.56
SRM-201ENST00000376957 NEK9Q8TD19 979 aa24.79■■□□□ 1.56
SRM-201ENST00000376957 TOP1MTQ969P6 601 aa24.79■■□□□ 1.56
SRM-201ENST00000376957 SCLT1Q96NL6 688 aa24.79■■□□□ 1.56
SRM-201ENST00000376957 YME1L1Q96TA2 773 aa24.79■■□□□ 1.56
SRM-201ENST00000376957 ZSWIM4Q9H7M6 989 aa24.79■■□□□ 1.56
SRM-201ENST00000376957 MICAL3Q7RTP6 2002 aa24.79■■□□□ 1.56
SRM-201ENST00000376957 RPS6KA5O75582 802 aa24.78■■□□□ 1.56
SRM-201ENST00000376957 CD52P31358 61 aa24.78■■□□□ 1.56
SRM-201ENST00000376957 TXKP42681 527 aa24.78■■□□□ 1.56
SRM-201ENST00000376957 TCTN1Q2MV58 587 aa24.78■■□□□ 1.56
SRM-201ENST00000376957 PRDM12Q9H4Q4 367 aa24.78■■□□□ 1.56
SRM-201ENST00000376957 SMC3Q9UQE7 1217 aa24.78■■□□□ 1.56
SRM-201ENST00000376957 EVPLQ92817 2033 aa24.78■■□□□ 1.56
SRM-201ENST00000376957 H3BQV1 296 aa24.77■■□□□ 1.56
SRM-201ENST00000376957 EML1O00423 815 aa24.77■■□□□ 1.56
SRM-201ENST00000376957 UPP2O95045 317 aa24.77■■□□□ 1.56
SRM-201ENST00000376957 NFX1Q12986 1120 aaKnown RBP24.77■■□□□ 1.56
SRM-201ENST00000376957 C4orf19Q8IY42 314 aa24.77■■□□□ 1.56
SRM-201ENST00000376957 SLC7A3Q8WY07 619 aa24.77■■□□□ 1.56
SRM-201ENST00000376957 PADI3Q9ULW8 664 aa24.77■■□□□ 1.56
SRM-201ENST00000376957 VTNP04004 478 aa24.76■■□□□ 1.55
SRM-201ENST00000376957 STAG3L1P0CL83 205 aa24.76■■□□□ 1.55
SRM-201ENST00000376957 CLCN3P51790 818 aa24.76■■□□□ 1.55
SRM-201ENST00000376957 KIZQ2M2Z5 673 aa24.76■■□□□ 1.55
SRM-201ENST00000376957 TMEM266Q2M3C6 531 aa24.76■■□□□ 1.55
SRM-201ENST00000376957 MAFAQ8NHW3 353 aaPredicted RBP24.76■■□□□ 1.55
SRM-201ENST00000376957 CCDC43Q96MW1 224 aaKnown RBP24.76■■□□□ 1.55
SRM-201ENST00000376957 LXNQ9BS40 222 aa24.76■■□□□ 1.55
SRM-201ENST00000376957 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.75■■□□□ 1.55
SRM-201ENST00000376957 ENPP3O14638 875 aa24.75■■□□□ 1.55
SRM-201ENST00000376957 TAP1Q03518 808 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms