RNA–Protein interactions for RNA: ENST00000376757.9

SSH3-203, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,990 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-203ENST00000376757 VCPKMTQ9H867 229 aa17.19■□□□□ 0.34
SSH3-203ENST00000376757 TMEM59LQ9UK28 342 aa17.19■□□□□ 0.34
SSH3-203ENST00000376757 MYH7BA7E2Y1 1941 aa17.19■□□□□ 0.34
SSH3-203ENST00000376757 AFPP02771 609 aaKnown RBP17.19■□□□□ 0.34
SSH3-203ENST00000376757 KRT13P13646 458 aa17.19■□□□□ 0.34
SSH3-203ENST00000376757 PPP2R2AP63151 447 aa17.19■□□□□ 0.34
SSH3-203ENST00000376757 SLC10A5Q5PT55 438 aa17.19■□□□□ 0.34
SSH3-203ENST00000376757 RUBCNQ92622 972 aa17.19■□□□□ 0.34
SSH3-203ENST00000376757 ARHGEF1Q92888 912 aaKnown RBP17.19■□□□□ 0.34
SSH3-203ENST00000376757 ELMO3Q96BJ8 720 aa17.19■□□□□ 0.34
SSH3-203ENST00000376757 BHMT2Q9H2M3 363 aa17.19■□□□□ 0.34
SSH3-203ENST00000376757 SPATA31A1Q5TZJ5 1347 aa17.19■□□□□ 0.34
SSH3-203ENST00000376757 H2AFZP0C0S5 128 aa17.19■□□□□ 0.34
SSH3-203ENST00000376757 TRIM49P0CI25 452 aa17.19■□□□□ 0.34
SSH3-203ENST00000376757 TRIM49CP0CI26 452 aa17.19■□□□□ 0.34
SSH3-203ENST00000376757 HOXA13P31271 388 aaPredicted RBP17.19■□□□□ 0.34
SSH3-203ENST00000376757 CDR1P51861 262 aa17.19■□□□□ 0.34
SSH3-203ENST00000376757 PPP4CP60510 307 aa17.19■□□□□ 0.34
SSH3-203ENST00000376757 TCP10Q12799 353 aa17.19■□□□□ 0.34
SSH3-203ENST00000376757 H2AFVQ71UI9 128 aa17.19■□□□□ 0.34
SSH3-203ENST00000376757 MLXIPLQ9NP71 852 aa17.19■□□□□ 0.34
SSH3-203ENST00000376757 ROBO3Q96MS0 1386 aa17.18■□□□□ 0.34
SSH3-203ENST00000376757 CTNND1O60716 968 aaKnown RBP17.18■□□□□ 0.34
SSH3-203ENST00000376757 TMC3Q7Z5M5 1100 aa17.18■□□□□ 0.34
SSH3-203ENST00000376757 NYXQ9GZU5 481 aa17.18■□□□□ 0.34
SSH3-203ENST00000376757 DHX36Q9H2U1 1008 aaKnown RBP17.18■□□□□ 0.34
SSH3-203ENST00000376757 CXorf56Q9H5V9 222 aa17.18■□□□□ 0.34
SSH3-203ENST00000376757 PCDHA1Q9Y5I3 950 aa17.18■□□□□ 0.34
SSH3-203ENST00000376757 ABCB11O95342 1321 aa17.18■□□□□ 0.34
SSH3-203ENST00000376757 IRS2Q9Y4H2 1338 aa17.18■□□□□ 0.34
SSH3-203ENST00000376757 TRAPPC3O43617 180 aa17.18■□□□□ 0.34
SSH3-203ENST00000376757 RDXP35241 583 aaKnown RBP17.18■□□□□ 0.34
SSH3-203ENST00000376757 IKQ13123 557 aaPredicted RBP17.18■□□□□ 0.34
SSH3-203ENST00000376757 SEMA3FQ13275 785 aa17.18■□□□□ 0.34
SSH3-203ENST00000376757 MAEAQ7L5Y9 396 aa17.18■□□□□ 0.34
SSH3-203ENST00000376757 CD302Q8IX05 232 aa17.18■□□□□ 0.34
SSH3-203ENST00000376757 LRRC45Q96CN5 670 aa17.18■□□□□ 0.34
SSH3-203ENST00000376757 CEP63Q96MT8 703 aa17.18■□□□□ 0.34
SSH3-203ENST00000376757 EDEM3Q9BZQ6 932 aa17.18■□□□□ 0.34
SSH3-203ENST00000376757 NUCKS1Q9H1E3 243 aaKnown RBP17.18■□□□□ 0.34
SSH3-203ENST00000376757 PNMA6FA0A0J9YX94 578 aa17.17■□□□□ 0.34
SSH3-203ENST00000376757 RPSAP08865 295 aaKnown RBP17.17■□□□□ 0.34
SSH3-203ENST00000376757 NMT1P30419 496 aaKnown RBP17.17■□□□□ 0.34
SSH3-203ENST00000376757 USP8P40818 1118 aa17.17■□□□□ 0.34
SSH3-203ENST00000376757 UBXN2AP68543 259 aa17.17■□□□□ 0.34
SSH3-203ENST00000376757 BYSLQ13895 437 aaKnown RBP17.17■□□□□ 0.34
SSH3-203ENST00000376757 ZNF746Q6NUN9 644 aaPredicted RBP17.17■□□□□ 0.34
SSH3-203ENST00000376757 CPNE8Q86YQ8 564 aa17.17■□□□□ 0.34
SSH3-203ENST00000376757 MGARPQ8TDB4 240 aa17.17■□□□□ 0.34
SSH3-203ENST00000376757 SYN2Q92777 582 aaPredicted RBP17.17■□□□□ 0.34
SSH3-203ENST00000376757 ARHGEF26Q96DR7 871 aa17.17■□□□□ 0.34
SSH3-203ENST00000376757 EVI5O60447 810 aa17.17■□□□□ 0.34
SSH3-203ENST00000376757 FLOT1O75955 427 aa17.17■□□□□ 0.34
SSH3-203ENST00000376757 IFI35P80217 286 aaPredicted RBP17.17■□□□□ 0.34
SSH3-203ENST00000376757 ZNF543Q08ER8 600 aa17.17■□□□□ 0.34
SSH3-203ENST00000376757 DCAF12L1Q5VU92 463 aa17.17■□□□□ 0.34
SSH3-203ENST00000376757 LNX1Q8TBB1 728 aaPredicted RBP17.17■□□□□ 0.34
SSH3-203ENST00000376757 SLC35G2Q8TBE7 412 aa17.17■□□□□ 0.34
SSH3-203ENST00000376757 RUSC1Q9BVN2 902 aa17.17■□□□□ 0.34
SSH3-203ENST00000376757 NARFQ9UHQ1 456 aa17.17■□□□□ 0.34
SSH3-203ENST00000376757 PTPN22Q9Y2R2 807 aa17.17■□□□□ 0.34
SSH3-203ENST00000376757 PCDHAC2Q9Y5I4 1007 aa17.17■□□□□ 0.34
SSH3-203ENST00000376757 GPR75-ASB3A0A0A6YYF3 556 aa17.16■□□□□ 0.34
SSH3-203ENST00000376757 MARCKSL1P49006 195 aa17.16■□□□□ 0.34
SSH3-203ENST00000376757 CYP2J2P51589 502 aa17.16■□□□□ 0.34
SSH3-203ENST00000376757 MRPL12P52815 198 aaKnown RBP17.16■□□□□ 0.34
SSH3-203ENST00000376757 ADCY1Q08828 1119 aa17.16■□□□□ 0.34
SSH3-203ENST00000376757 GIT2Q14161 759 aa17.16■□□□□ 0.34
SSH3-203ENST00000376757 OTUD6AQ7L8S5 288 aa17.16■□□□□ 0.34
SSH3-203ENST00000376757 CCDC25Q86WR0 208 aa17.16■□□□□ 0.34
SSH3-203ENST00000376757 FAM212AQ96EL1 285 aa17.16■□□□□ 0.34
SSH3-203ENST00000376757 DNAJC17Q9NVM6 304 aaKnown RBP17.16■□□□□ 0.34
SSH3-203ENST00000376757 CD2APQ9Y5K6 639 aa17.16■□□□□ 0.34
SSH3-203ENST00000376757 ESYT2A0FGR8 921 aa17.16■□□□□ 0.34
SSH3-203ENST00000376757 NR3C1P04150 777 aa17.16■□□□□ 0.34
SSH3-203ENST00000376757 SLC12A3P55017 1021 aa17.16■□□□□ 0.34
SSH3-203ENST00000376757 KNOP1Q1ED39 458 aaKnown RBP17.16■□□□□ 0.34
SSH3-203ENST00000376757 QRICH1Q2TAL8 776 aa17.16■□□□□ 0.34
SSH3-203ENST00000376757 SWT1Q5T5J6 900 aaKnown RBP17.16■□□□□ 0.34
SSH3-203ENST00000376757 NT5DC3Q86UY8 548 aa17.16■□□□□ 0.34
SSH3-203ENST00000376757 CACNA2D3Q8IZS8 1091 aa17.16■□□□□ 0.34
SSH3-203ENST00000376757 ACP6Q9NPH0 428 aa17.16■□□□□ 0.34
SSH3-203ENST00000376757 GEMIN8Q9NWZ8 242 aaKnown RBP17.16■□□□□ 0.34
SSH3-203ENST00000376757 UTP11Q9Y3A2 253 aaKnown RBP17.16■□□□□ 0.34
SSH3-203ENST00000376757 COL22A1Q8NFW1 1626 aaPredicted RBP17.16■□□□□ 0.34
SSH3-203ENST00000376757 F8VZ95 297 aa17.16■□□□□ 0.34
SSH3-203ENST00000376757 ATMINO43313 823 aaPredicted RBP17.16■□□□□ 0.34
SSH3-203ENST00000376757 FGFR4P22455 802 aa17.16■□□□□ 0.34
SSH3-203ENST00000376757 CUL1Q13616 776 aa17.16■□□□□ 0.34
SSH3-203ENST00000376757 CTTNQ14247 550 aaKnown RBP17.16■□□□□ 0.34
SSH3-203ENST00000376757 LRRC14Q15048 493 aa17.16■□□□□ 0.34
SSH3-203ENST00000376757 FAM133BQ5BKY9 247 aaKnown RBP17.16■□□□□ 0.34
SSH3-203ENST00000376757 DPY19L2P1Q6NXN4 242 aa17.16■□□□□ 0.34
SSH3-203ENST00000376757 C6orf89Q6UWU4 347 aa17.16■□□□□ 0.34
SSH3-203ENST00000376757 ZFPM1Q8IX07 1006 aa17.16■□□□□ 0.34
SSH3-203ENST00000376757 C18orf8Q96DM3 657 aa17.16■□□□□ 0.34
SSH3-203ENST00000376757 FMO2Q99518 471 aa17.16■□□□□ 0.34
SSH3-203ENST00000376757 LRRC27Q9C0I9 530 aa17.16■□□□□ 0.34
SSH3-203ENST00000376757 DAGLAQ9Y4D2 1042 aa17.16■□□□□ 0.34
SSH3-203ENST00000376757 ANKRD20A8PQ5CZ79 823 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms