RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 CAPZA3Q96KX2 299 aa22.2■■□□□ 1.14
VSX1-202ENST00000376709 ALS2CR12Q96Q35 445 aa22.2■■□□□ 1.14
VSX1-202ENST00000376709 MLXIPQ9HAP2 919 aa22.2■■□□□ 1.14
VSX1-202ENST00000376709 SLC38A10Q9HBR0 1119 aa22.2■■□□□ 1.14
VSX1-202ENST00000376709 SEL1LQ9UBV2 794 aa22.2■■□□□ 1.14
VSX1-202ENST00000376709 CAPN6Q9Y6Q1 641 aa22.2■■□□□ 1.14
VSX1-202ENST00000376709 MYH11P35749 1972 aa22.2■■□□□ 1.14
VSX1-202ENST00000376709 ARHGEF35A5YM69 484 aa22.19■■□□□ 1.14
VSX1-202ENST00000376709 CASP4P49662 377 aa22.19■■□□□ 1.14
VSX1-202ENST00000376709 ANGEL2Q5VTE6 544 aaKnown RBP22.19■■□□□ 1.14
VSX1-202ENST00000376709 STXBP4Q6ZWJ1 553 aa22.19■■□□□ 1.14
VSX1-202ENST00000376709 MIER3Q7Z3K6 550 aa22.19■■□□□ 1.14
VSX1-202ENST00000376709 NEK9Q8TD19 979 aa22.19■■□□□ 1.14
VSX1-202ENST00000376709 GANQ9H2C0 597 aa22.19■■□□□ 1.14
VSX1-202ENST00000376709 GINM1Q9NU53 330 aa22.19■■□□□ 1.14
VSX1-202ENST00000376709 ODF2LQ9ULJ1 636 aa22.19■■□□□ 1.14
VSX1-202ENST00000376709 JRKLQ9Y4A0 524 aa22.19■■□□□ 1.14
VSX1-202ENST00000376709 PCDHB13Q9Y5F0 798 aa22.19■■□□□ 1.14
VSX1-202ENST00000376709 ATP8B1O43520 1251 aa22.19■■□□□ 1.14
VSX1-202ENST00000376709 MOCS3O95396 460 aa22.19■■□□□ 1.14
VSX1-202ENST00000376709 VCAM1P19320 739 aa22.19■■□□□ 1.14
VSX1-202ENST00000376709 EXOC3L4Q17RC7 722 aa22.19■■□□□ 1.14
VSX1-202ENST00000376709 ODR4Q5SWX8 454 aa22.19■■□□□ 1.14
VSX1-202ENST00000376709 FAM133AQ8N9E0 248 aa22.19■■□□□ 1.14
VSX1-202ENST00000376709 NOA1Q8NC60 698 aaKnown RBP22.19■■□□□ 1.14
VSX1-202ENST00000376709 TRPM4Q8TD43 1214 aa22.19■■□□□ 1.14
VSX1-202ENST00000376709 LUC7LQ9NQ29 371 aaKnown RBP22.19■■□□□ 1.14
VSX1-202ENST00000376709 FZD1Q9UP38 647 aa22.19■■□□□ 1.14
VSX1-202ENST00000376709 ZMYM2Q9UBW7 1377 aa22.18■■□□□ 1.14
VSX1-202ENST00000376709 TGFB1I1O43294 461 aa22.18■■□□□ 1.14
VSX1-202ENST00000376709 CKAP4Q07065 602 aaKnown RBP22.18■■□□□ 1.14
VSX1-202ENST00000376709 MUM1L1Q5H9M0 696 aa22.18■■□□□ 1.14
VSX1-202ENST00000376709 CAGE1Q8TC20 777 aa22.18■■□□□ 1.14
VSX1-202ENST00000376709 PNKPQ96T60 521 aa22.18■■□□□ 1.14
VSX1-202ENST00000376709 SAMM50Q9Y512 469 aa22.18■■□□□ 1.14
VSX1-202ENST00000376709 MYH10P35580 1976 aa22.18■■□□□ 1.14
VSX1-202ENST00000376709 PPP1R12BO60237 982 aaPredicted RBP22.18■■□□□ 1.14
VSX1-202ENST00000376709 ACTN1P12814 892 aa22.18■■□□□ 1.14
VSX1-202ENST00000376709 SLC9A1P19634 815 aa22.18■■□□□ 1.14
VSX1-202ENST00000376709 ZNF131P52739 623 aa22.18■■□□□ 1.14
VSX1-202ENST00000376709 KLHL30Q0D2K2 578 aa22.18■■□□□ 1.14
VSX1-202ENST00000376709 ENOX2Q16206 610 aaKnown RBP22.18■■□□□ 1.14
VSX1-202ENST00000376709 PCNX4Q63HM2 1172 aa22.18■■□□□ 1.14
VSX1-202ENST00000376709 NIPA1Q7RTP0 329 aa22.18■■□□□ 1.14
VSX1-202ENST00000376709 DRC1Q96MC2 740 aa22.18■■□□□ 1.14
VSX1-202ENST00000376709 MMS19Q96T76 1030 aa22.18■■□□□ 1.14
VSX1-202ENST00000376709 AIPL1Q9NZN9 384 aa22.18■■□□□ 1.14
VSX1-202ENST00000376709 PPP1R9AQ9ULJ8 1098 aa22.18■■□□□ 1.14
VSX1-202ENST00000376709 RBAK-RBAKDNI3L0D1 243 aa22.17■■□□□ 1.14
VSX1-202ENST00000376709 PJA2O43164 708 aa22.17■■□□□ 1.14
VSX1-202ENST00000376709 TBC1D8O95759 1140 aa22.17■■□□□ 1.14
VSX1-202ENST00000376709 PLA2G4AP47712 749 aa22.17■■□□□ 1.14
VSX1-202ENST00000376709 MTMR1Q13613 665 aa22.17■■□□□ 1.14
VSX1-202ENST00000376709 ASIC2Q16515 512 aa22.17■■□□□ 1.14
VSX1-202ENST00000376709 TKFCQ3LXA3 575 aa22.17■■□□□ 1.14
VSX1-202ENST00000376709 HS2ST1Q7LGA3 356 aa22.17■■□□□ 1.14
VSX1-202ENST00000376709 ZNF720Q7Z2F6 126 aa22.17■■□□□ 1.14
VSX1-202ENST00000376709 ZKSCAN4Q969J2 545 aaPredicted RBP22.17■■□□□ 1.14
VSX1-202ENST00000376709 SPAG5Q96R06 1193 aa22.17■■□□□ 1.14
VSX1-202ENST00000376709 PLCB1Q9NQ66 1216 aa22.17■■□□□ 1.14
VSX1-202ENST00000376709 RAB21Q9UL25 225 aa22.17■■□□□ 1.14
VSX1-202ENST00000376709 SASH3O75995 380 aa22.16■■□□□ 1.14
VSX1-202ENST00000376709 DCAF15Q66K64 600 aa22.16■■□□□ 1.14
VSX1-202ENST00000376709 KSR1Q8IVT5 923 aa22.16■■□□□ 1.14
VSX1-202ENST00000376709 ANKRD13CQ8N6S4 541 aa22.16■■□□□ 1.14
VSX1-202ENST00000376709 SYTL5Q8TDW5 730 aaPredicted RBP22.16■■□□□ 1.14
VSX1-202ENST00000376709 SLC35C1Q96A29 364 aa22.16■■□□□ 1.14
VSX1-202ENST00000376709 RPGRIP1Q96KN7 1286 aa22.16■■□□□ 1.14
VSX1-202ENST00000376709 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.16■■□□□ 1.14
VSX1-202ENST00000376709 IKZF4Q9H2S9 585 aa22.16■■□□□ 1.14
VSX1-202ENST00000376709 RPAP3Q9H6T3 665 aaPredicted RBP22.16■■□□□ 1.14
VSX1-202ENST00000376709 UBE4BO95155 1302 aa22.16■■□□□ 1.14
VSX1-202ENST00000376709 ERLIN1O75477 346 aa22.16■■□□□ 1.14
VSX1-202ENST00000376709 UCHL3P15374 230 aa22.16■■□□□ 1.14
VSX1-202ENST00000376709 EIF2AK2P19525 551 aaKnown RBP22.16■■□□□ 1.14
VSX1-202ENST00000376709 GUCY2CP25092 1073 aa22.16■■□□□ 1.14
VSX1-202ENST00000376709 PON1P27169 355 aa22.16■■□□□ 1.14
VSX1-202ENST00000376709 PSMC2P35998 433 aaKnown RBP22.16■■□□□ 1.14
VSX1-202ENST00000376709 USP14P54578 494 aa22.16■■□□□ 1.14
VSX1-202ENST00000376709 RPS6P62753 249 aaKnown RBP22.16■■□□□ 1.14
VSX1-202ENST00000376709 GHRHRQ02643 423 aa22.16■■□□□ 1.14
VSX1-202ENST00000376709 GABPB1Q06547 395 aaPredicted RBP22.16■■□□□ 1.14
VSX1-202ENST00000376709 LONRF2Q1L5Z9 754 aa22.16■■□□□ 1.14
VSX1-202ENST00000376709 FAM186BQ8IYM0 893 aa22.16■■□□□ 1.14
VSX1-202ENST00000376709 AGO4Q9HCK5 861 aaKnown RBP22.16■■□□□ 1.14
VSX1-202ENST00000376709 MAP3K20Q9NYL2 800 aaKnown RBP22.16■■□□□ 1.14
VSX1-202ENST00000376709 ZBED4O75132 1171 aa22.15■■□□□ 1.14
VSX1-202ENST00000376709 P4HBP07237 508 aaKnown RBP22.15■■□□□ 1.14
VSX1-202ENST00000376709 NAP1L1P55209 391 aaKnown RBP22.15■■□□□ 1.14
VSX1-202ENST00000376709 MRPS9P82933 396 aaKnown RBP22.15■■□□□ 1.14
VSX1-202ENST00000376709 SPP2Q13103 211 aa22.15■■□□□ 1.14
VSX1-202ENST00000376709 KLHDC7AQ5VTJ3 777 aa22.15■■□□□ 1.14
VSX1-202ENST00000376709 GBP6Q6ZN66 633 aa22.15■■□□□ 1.14
VSX1-202ENST00000376709 WRNIP1Q96S55 665 aa22.15■■□□□ 1.14
VSX1-202ENST00000376709 FIZ1Q96SL8 496 aa22.15■■□□□ 1.14
VSX1-202ENST00000376709 GCNT4Q9P109 453 aa22.15■■□□□ 1.14
VSX1-202ENST00000376709 UBIAD1Q9Y5Z9 338 aa22.15■■□□□ 1.14
VSX1-202ENST00000376709 DOCK1Q14185 1865 aa22.15■■□□□ 1.14
VSX1-202ENST00000376709 ZNF185O15231 689 aa22.15■■□□□ 1.14
VSX1-202ENST00000376709 DHX15O43143 795 aaKnown RBP22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms