RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 TMOD1P28289 359 aa16.72■□□□□ 0.27
HDAC6-204ENST00000376643 CIITAP33076 1130 aa16.72■□□□□ 0.27
HDAC6-204ENST00000376643 SARSP49591 514 aaKnown RBP16.72■□□□□ 0.27
HDAC6-204ENST00000376643 APOBRQ0VD83 1088 aa16.72■□□□□ 0.27
HDAC6-204ENST00000376643 NFX1Q12986 1120 aaKnown RBP16.72■□□□□ 0.27
HDAC6-204ENST00000376643 CCDC60Q8IWA6 550 aaPredicted RBP16.72■□□□□ 0.27
HDAC6-204ENST00000376643 CRYGNQ8WXF5 182 aa16.72■□□□□ 0.27
HDAC6-204ENST00000376643 UPF3BQ9BZI7 483 aaKnown RBP16.72■□□□□ 0.27
HDAC6-204ENST00000376643 SH3GLB2Q9NR46 395 aa16.72■□□□□ 0.27
HDAC6-204ENST00000376643 CLDND1Q9NY35 253 aa16.72■□□□□ 0.27
HDAC6-204ENST00000376643 PCDHB7Q9Y5E2 793 aa16.72■□□□□ 0.27
HDAC6-204ENST00000376643 NLRC5Q86WI3 1866 aa16.71■□□□□ 0.27
HDAC6-204ENST00000376643 IGLV3-22A0A075B6J6 115 aa16.71■□□□□ 0.27
HDAC6-204ENST00000376643 WDR64B1ANS9 1081 aa16.71■□□□□ 0.27
HDAC6-204ENST00000376643 PI4K2BG5E9Z4 385 aa16.71■□□□□ 0.27
HDAC6-204ENST00000376643 GPR37L1O60883 481 aa16.71■□□□□ 0.27
HDAC6-204ENST00000376643 CCNE2O96020 404 aa16.71■□□□□ 0.27
HDAC6-204ENST00000376643 RPS6KB1P23443 525 aa16.71■□□□□ 0.27
HDAC6-204ENST00000376643 CRYBB1P53674 252 aaPredicted RBP16.71■□□□□ 0.27
HDAC6-204ENST00000376643 TMEM62Q0P6H9 643 aa16.71■□□□□ 0.27
HDAC6-204ENST00000376643 SWSAP1Q6NVH7 229 aa16.71■□□□□ 0.27
HDAC6-204ENST00000376643 CPLX2Q6PUV4 134 aaKnown RBP16.71■□□□□ 0.27
HDAC6-204ENST00000376643 SLC24A5Q71RS6 500 aa16.71■□□□□ 0.27
HDAC6-204ENST00000376643 TRAPPC12Q8WVT3 735 aa16.71■□□□□ 0.27
HDAC6-204ENST00000376643 CCDC136Q96JN2 1154 aa16.71■□□□□ 0.27
HDAC6-204ENST00000376643 MAP7D2Q96T17 732 aa16.71■□□□□ 0.27
HDAC6-204ENST00000376643 AGXT2Q9BYV1 514 aa16.71■□□□□ 0.27
HDAC6-204ENST00000376643 GINS2Q9Y248 185 aa16.71■□□□□ 0.27
HDAC6-204ENST00000376643 SAMM50Q9Y512 469 aa16.71■□□□□ 0.27
HDAC6-204ENST00000376643 PCDHB12Q9Y5F1 795 aa16.71■□□□□ 0.27
HDAC6-204ENST00000376643 MAFBQ9Y5Q3 323 aaPredicted RBP16.71■□□□□ 0.27
HDAC6-204ENST00000376643 GRM6O15303 877 aa16.7■□□□□ 0.26
HDAC6-204ENST00000376643 DHX15O43143 795 aaKnown RBP16.7■□□□□ 0.26
HDAC6-204ENST00000376643 HOXA2O43364 376 aa16.7■□□□□ 0.26
HDAC6-204ENST00000376643 IFNAR1P17181 557 aa16.7■□□□□ 0.26
HDAC6-204ENST00000376643 SFNP31947 248 aa16.7■□□□□ 0.26
HDAC6-204ENST00000376643 USP11P51784 963 aa16.7■□□□□ 0.26
HDAC6-204ENST00000376643 UBE3AQ05086 875 aa16.7■□□□□ 0.26
HDAC6-204ENST00000376643 PRR16Q569H4 304 aa16.7■□□□□ 0.26
HDAC6-204ENST00000376643 FAM122AQ96E09 287 aa16.7■□□□□ 0.26
HDAC6-204ENST00000376643 EPHX3Q9H6B9 360 aa16.7■□□□□ 0.26
HDAC6-204ENST00000376643 NRBP2Q9NSY0 501 aa16.7■□□□□ 0.26
HDAC6-204ENST00000376643 PLAGL2Q9UPG8 496 aa16.7■□□□□ 0.26
HDAC6-204ENST00000376643 SNX14Q9Y5W7 946 aa16.7■□□□□ 0.26
HDAC6-204ENST00000376643 MRPL42Q9Y6G3 142 aaKnown RBP16.7■□□□□ 0.26
HDAC6-204ENST00000376643 H3BQ06 376 aaPredicted RBP16.69■□□□□ 0.26
HDAC6-204ENST00000376643 LINC00271P0C7V0 271 aa16.69■□□□□ 0.26
HDAC6-204ENST00000376643 IL9P15248 144 aa16.69■□□□□ 0.26
HDAC6-204ENST00000376643 JAK3P52333 1124 aa16.69■□□□□ 0.26
HDAC6-204ENST00000376643 CTC1Q2NKJ3 1217 aa16.69■□□□□ 0.26
HDAC6-204ENST00000376643 SPOUT1Q5T280 376 aaKnown RBP16.69■□□□□ 0.26
HDAC6-204ENST00000376643 PDE12Q6L8Q7 609 aaKnown RBP16.69■□□□□ 0.26
HDAC6-204ENST00000376643 KIAA0319LQ8IZA0 1049 aa16.69■□□□□ 0.26
HDAC6-204ENST00000376643 CRIPAKQ8N1N5 446 aa16.69■□□□□ 0.26
HDAC6-204ENST00000376643 METTL13Q8N6R0 699 aa16.69■□□□□ 0.26
HDAC6-204ENST00000376643 RDM1Q8NG50 284 aa16.69■□□□□ 0.26
HDAC6-204ENST00000376643 LINC01599Q8WXQ3 324 aa16.69■□□□□ 0.26
HDAC6-204ENST00000376643 RIT2Q99578 217 aa16.69■□□□□ 0.26
HDAC6-204ENST00000376643 LRFN3Q9BTN0 628 aa16.69■□□□□ 0.26
HDAC6-204ENST00000376643 ELAC1Q9H777 363 aaKnown RBP16.69■□□□□ 0.26
HDAC6-204ENST00000376643 ERVK-5Q9HDB9 667 aa16.69■□□□□ 0.26
HDAC6-204ENST00000376643 RGS18Q9NS28 235 aa16.69■□□□□ 0.26
HDAC6-204ENST00000376643 CPLX1O14810 134 aa16.68■□□□□ 0.26
HDAC6-204ENST00000376643 C22orf31O95567 290 aa16.68■□□□□ 0.26
HDAC6-204ENST00000376643 PLA2G5P39877 138 aa16.68■□□□□ 0.26
HDAC6-204ENST00000376643 EVCP57679 992 aa16.68■□□□□ 0.26
HDAC6-204ENST00000376643 CDC42EP1Q00587 391 aa16.68■□□□□ 0.26
HDAC6-204ENST00000376643 SMAD4Q13485 552 aaKnown RBP16.68■□□□□ 0.26
HDAC6-204ENST00000376643 PKN1Q16512 942 aa16.68■□□□□ 0.26
HDAC6-204ENST00000376643 GALNT17Q6IS24 598 aa16.68■□□□□ 0.26
HDAC6-204ENST00000376643 RTN4RL1Q86UN2 441 aaPredicted RBP16.68■□□□□ 0.26
HDAC6-204ENST00000376643 ADHFE1Q8IWW8 467 aa16.68■□□□□ 0.26
HDAC6-204ENST00000376643 RSPH1Q8WYR4 309 aa16.68■□□□□ 0.26
HDAC6-204ENST00000376643 ZBTB10Q96DT7 871 aa16.68■□□□□ 0.26
HDAC6-204ENST00000376643 SLC26A6Q9BXS9 759 aa16.68■□□□□ 0.26
HDAC6-204ENST00000376643 ATP6V0A4Q9HBG4 840 aa16.68■□□□□ 0.26
HDAC6-204ENST00000376643 GABBR1Q9UBS5 961 aa16.68■□□□□ 0.26
HDAC6-204ENST00000376643 ST3GAL5Q9UNP4 418 aa16.68■□□□□ 0.26
HDAC6-204ENST00000376643 REV3LO60673 3130 aa16.68■□□□□ 0.26
HDAC6-204ENST00000376643 GAS7O60861 476 aa16.67■□□□□ 0.26
HDAC6-204ENST00000376643 SRGAP2BP0DMP2 458 aa16.67■□□□□ 0.26
HDAC6-204ENST00000376643 ZSCAN20P17040 1043 aaPredicted RBP16.67■□□□□ 0.26
HDAC6-204ENST00000376643 NLRP5P59047 1200 aa16.67■□□□□ 0.26
HDAC6-204ENST00000376643 PAN2Q504Q3 1202 aaKnown RBP16.67■□□□□ 0.26
HDAC6-204ENST00000376643 PHKBQ93100 1093 aa16.67■□□□□ 0.26
HDAC6-204ENST00000376643 ADAM2Q99965 735 aa16.67■□□□□ 0.26
HDAC6-204ENST00000376643 TEKT3Q9BXF9 490 aa16.67■□□□□ 0.26
HDAC6-204ENST00000376643 TMX1Q9H3N1 280 aa16.67■□□□□ 0.26
HDAC6-204ENST00000376643 TMEM161AQ9NX61 479 aa16.67■□□□□ 0.26
HDAC6-204ENST00000376643 CD207Q9UJ71 328 aa16.67■□□□□ 0.26
HDAC6-204ENST00000376643 NOC2LQ9Y3T9 749 aaKnown RBP16.67■□□□□ 0.26
HDAC6-204ENST00000376643 CARNS1A5YM72 827 aa16.66■□□□□ 0.26
HDAC6-204ENST00000376643 PRR33A8MZF0 331 aa16.66■□□□□ 0.26
HDAC6-204ENST00000376643 DCXO43602 365 aa16.66■□□□□ 0.26
HDAC6-204ENST00000376643 ITGB1P05556 798 aa16.66■□□□□ 0.26
HDAC6-204ENST00000376643 CPA1P15085 419 aa16.66■□□□□ 0.26
HDAC6-204ENST00000376643 LAG3P18627 525 aa16.66■□□□□ 0.26
HDAC6-204ENST00000376643 NDUFV1P49821 464 aa16.66■□□□□ 0.26
HDAC6-204ENST00000376643 SSRP1Q08945 709 aaKnown RBP16.66■□□□□ 0.26
HDAC6-204ENST00000376643 HYAL1Q12794 435 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms