RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 HIBCHQ6NVY1 386 aaPredicted RBP15.63■□□□□ 0.09
TNFRSF1B-201ENST00000376259 CATSPER3Q86XQ3 398 aa15.63■□□□□ 0.09
TNFRSF1B-201ENST00000376259 DYDC2Q96IM9 177 aa15.63■□□□□ 0.09
TNFRSF1B-201ENST00000376259 ELAC2Q9BQ52 826 aaKnown RBP15.63■□□□□ 0.09
TNFRSF1B-201ENST00000376259 F5H6K3 240 aa15.62■□□□□ 0.09
TNFRSF1B-201ENST00000376259 CYP11B2P19099 503 aa15.62■□□□□ 0.09
TNFRSF1B-201ENST00000376259 KLRC3Q07444 240 aa15.62■□□□□ 0.09
TNFRSF1B-201ENST00000376259 BIRC3Q13489 604 aa15.62■□□□□ 0.09
TNFRSF1B-201ENST00000376259 ABCB5Q2M3G0 1257 aa15.62■□□□□ 0.09
TNFRSF1B-201ENST00000376259 PRR5LQ6MZQ0 368 aa15.62■□□□□ 0.09
TNFRSF1B-201ENST00000376259 ANKS4BQ8N8V4 417 aa15.62■□□□□ 0.09
TNFRSF1B-201ENST00000376259 ABCC6O95255 1503 aa15.62■□□□□ 0.09
TNFRSF1B-201ENST00000376259 GRID2IPA4D2P6 1211 aa15.62■□□□□ 0.09
TNFRSF1B-201ENST00000376259 PSMD2Q13200 908 aa15.62■□□□□ 0.09
TNFRSF1B-201ENST00000376259 COG2Q14746 738 aa15.62■□□□□ 0.09
TNFRSF1B-201ENST00000376259 TNIP1Q15025 636 aa15.62■□□□□ 0.09
TNFRSF1B-201ENST00000376259 ZNF473Q8WTR7 871 aaKnown RBP15.62■□□□□ 0.09
TNFRSF1B-201ENST00000376259 POLLQ9UGP5 575 aa15.62■□□□□ 0.09
TNFRSF1B-201ENST00000376259 PNMA2Q9UL42 364 aa15.62■□□□□ 0.09
TNFRSF1B-201ENST00000376259 CCDC172P0C7W6 258 aa15.62■□□□□ 0.09
TNFRSF1B-201ENST00000376259 FGFR4P22455 802 aa15.62■□□□□ 0.09
TNFRSF1B-201ENST00000376259 MMS22LQ6ZRQ5 1243 aa15.62■□□□□ 0.09
TNFRSF1B-201ENST00000376259 ZFPM1Q8IX07 1006 aa15.62■□□□□ 0.09
TNFRSF1B-201ENST00000376259 DDX4Q9NQI0 724 aaKnown RBP15.62■□□□□ 0.09
TNFRSF1B-201ENST00000376259 SPATA31A1Q5TZJ5 1347 aa15.61■□□□□ 0.09
TNFRSF1B-201ENST00000376259 EVI5O60447 810 aa15.61■□□□□ 0.09
TNFRSF1B-201ENST00000376259 AKAP3O75969 853 aa15.61■□□□□ 0.09
TNFRSF1B-201ENST00000376259 TRIM37O94972 964 aa15.61■□□□□ 0.09
TNFRSF1B-201ENST00000376259 MYL7Q01449 175 aa15.61■□□□□ 0.09
TNFRSF1B-201ENST00000376259 DR1Q01658 176 aa15.61■□□□□ 0.09
TNFRSF1B-201ENST00000376259 EPC2Q52LR7 807 aa15.61■□□□□ 0.09
TNFRSF1B-201ENST00000376259 AADACL2Q6P093 401 aa15.61■□□□□ 0.09
TNFRSF1B-201ENST00000376259 RNF10Q8N5U6 811 aaKnown RBP15.61■□□□□ 0.09
TNFRSF1B-201ENST00000376259 TBC1D16Q8TBP0 767 aa15.61■□□□□ 0.09
TNFRSF1B-201ENST00000376259 AENQ8WTP8 325 aaKnown RBP15.61■□□□□ 0.09
TNFRSF1B-201ENST00000376259 CSRNP1Q96S65 589 aa15.61■□□□□ 0.09
TNFRSF1B-201ENST00000376259 CD248Q9HCU0 757 aa15.61■□□□□ 0.09
TNFRSF1B-201ENST00000376259 BAZ2AQ9UIF9 1905 aaKnown RBP15.61■□□□□ 0.09
TNFRSF1B-201ENST00000376259 CTNNA2P26232 953 aa15.61■□□□□ 0.09
TNFRSF1B-201ENST00000376259 HSD17B3P37058 310 aa15.61■□□□□ 0.09
TNFRSF1B-201ENST00000376259 NAB2Q15742 525 aa15.61■□□□□ 0.09
TNFRSF1B-201ENST00000376259 KAZNQ674X7 775 aa15.61■□□□□ 0.09
TNFRSF1B-201ENST00000376259 CYP4F22Q6NT55 531 aa15.61■□□□□ 0.09
TNFRSF1B-201ENST00000376259 TBC1D1Q86TI0 1168 aaPredicted RBP15.61■□□□□ 0.09
TNFRSF1B-201ENST00000376259 SLFN12Q8IYM2 578 aa15.61■□□□□ 0.09
TNFRSF1B-201ENST00000376259 KIRREL3Q8IZU9 778 aa15.61■□□□□ 0.09
TNFRSF1B-201ENST00000376259 USP38Q8NB14 1042 aa15.61■□□□□ 0.09
TNFRSF1B-201ENST00000376259 IQCDQ96DY2 449 aa15.61■□□□□ 0.09
TNFRSF1B-201ENST00000376259 HEMGNQ9BXL5 484 aa15.61■□□□□ 0.09
TNFRSF1B-201ENST00000376259 KCNQ5Q9NR82 932 aa15.61■□□□□ 0.09
TNFRSF1B-201ENST00000376259 INTS9Q9NV88 658 aaKnown RBP15.61■□□□□ 0.09
TNFRSF1B-201ENST00000376259 SYCE1Q8N0S2 351 aa15.61■□□□□ 0.09
TNFRSF1B-201ENST00000376259 WHAMMQ8TF30 809 aa15.61■□□□□ 0.09
TNFRSF1B-201ENST00000376259 BTBD6Q96KE9 485 aa15.61■□□□□ 0.09
TNFRSF1B-201ENST00000376259 ACP6Q9NPH0 428 aa15.61■□□□□ 0.09
TNFRSF1B-201ENST00000376259 NAGPAQ9UK23 515 aa15.61■□□□□ 0.09
TNFRSF1B-201ENST00000376259 LOC102724159A0A0B4J2E5 919 aa15.6■□□□□ 0.09
TNFRSF1B-201ENST00000376259 TLR2O60603 784 aa15.6■□□□□ 0.09
TNFRSF1B-201ENST00000376259 IFNB1P01574 187 aa15.6■□□□□ 0.09
TNFRSF1B-201ENST00000376259 PSMC2P35998 433 aaKnown RBP15.6■□□□□ 0.09
TNFRSF1B-201ENST00000376259 ERVK-9P63128 1117 aa15.6■□□□□ 0.09
TNFRSF1B-201ENST00000376259 PWP2Q15269 919 aaKnown RBP15.6■□□□□ 0.09
TNFRSF1B-201ENST00000376259 FAM102BQ5T8I3 360 aa15.6■□□□□ 0.09
TNFRSF1B-201ENST00000376259 ARFGEF2Q9Y6D5 1785 aa15.6■□□□□ 0.09
TNFRSF1B-201ENST00000376259 PPEF1O14829 653 aaPredicted RBP15.6■□□□□ 0.09
TNFRSF1B-201ENST00000376259 ALAS1P13196 640 aa15.6■□□□□ 0.09
TNFRSF1B-201ENST00000376259 MDH1P40925 334 aaKnown RBP15.6■□□□□ 0.09
TNFRSF1B-201ENST00000376259 UAP1Q16222 522 aaPredicted RBP15.6■□□□□ 0.09
TNFRSF1B-201ENST00000376259 UBL4BQ8N7F7 174 aa15.6■□□□□ 0.09
TNFRSF1B-201ENST00000376259 BAP1Q92560 729 aa15.6■□□□□ 0.09
TNFRSF1B-201ENST00000376259 TCHPQ9BT92 498 aa15.6■□□□□ 0.09
TNFRSF1B-201ENST00000376259 RUSC1Q9BVN2 902 aa15.6■□□□□ 0.09
TNFRSF1B-201ENST00000376259 SSU72P8A0A1W2PR75 194 aa15.59■□□□□ 0.09
TNFRSF1B-201ENST00000376259 ZNF233A6NK53 670 aa15.59■□□□□ 0.09
TNFRSF1B-201ENST00000376259 TULP2O00295 520 aa15.59■□□□□ 0.09
TNFRSF1B-201ENST00000376259 LRRC55Q6ZSA7 311 aa15.59■□□□□ 0.09
TNFRSF1B-201ENST00000376259 AMIGO3Q86WK7 504 aa15.59■□□□□ 0.09
TNFRSF1B-201ENST00000376259 MTUS1Q9ULD2 1270 aa15.59■□□□□ 0.09
TNFRSF1B-201ENST00000376259 PROM2Q8N271 834 aa15.59■□□□□ 0.09
TNFRSF1B-201ENST00000376259 SLC35G2Q8TBE7 412 aa15.59■□□□□ 0.09
TNFRSF1B-201ENST00000376259 RAB17Q9H0T7 212 aa15.59■□□□□ 0.09
TNFRSF1B-201ENST00000376259 DBR1Q9UK59 544 aaKnown RBP15.59■□□□□ 0.09
TNFRSF1B-201ENST00000376259 A0A1W2PQJ5 194 aa15.59■□□□□ 0.09
TNFRSF1B-201ENST00000376259 TESPA1A2RU30 521 aaPredicted RBP15.59■□□□□ 0.09
TNFRSF1B-201ENST00000376259 HNRNPH1P31943 449 aaKnown RBP15.59■□□□□ 0.09
TNFRSF1B-201ENST00000376259 CCDC91Q7Z6B0 441 aa15.59■□□□□ 0.09
TNFRSF1B-201ENST00000376259 SLC30A5Q8TAD4 765 aa15.59■□□□□ 0.09
TNFRSF1B-201ENST00000376259 FAM84AQ96KN4 292 aa15.59■□□□□ 0.09
TNFRSF1B-201ENST00000376259 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.59■□□□□ 0.09
TNFRSF1B-201ENST00000376259 ZNF577Q9BSK1 485 aa15.59■□□□□ 0.09
TNFRSF1B-201ENST00000376259 AZI2Q9H6S1 392 aa15.59■□□□□ 0.09
TNFRSF1B-201ENST00000376259 PARVGQ9HBI0 331 aa15.59■□□□□ 0.09
TNFRSF1B-201ENST00000376259 METTL14Q9HCE5 456 aaKnown RBP15.59■□□□□ 0.09
TNFRSF1B-201ENST00000376259 TUBGCP6Q96RT7 1819 aa15.59■□□□□ 0.09
TNFRSF1B-201ENST00000376259 LAMA4Q16363 1823 aa15.59■□□□□ 0.09
TNFRSF1B-201ENST00000376259 EZRP15311 586 aaKnown RBP15.58■□□□□ 0.09
TNFRSF1B-201ENST00000376259 PDIA5Q14554 519 aa15.58■□□□□ 0.09
TNFRSF1B-201ENST00000376259 LMBRD2Q68DH5 695 aaPredicted RBP15.58■□□□□ 0.09
TNFRSF1B-201ENST00000376259 HAS1Q92839 578 aa15.58■□□□□ 0.09
TNFRSF1B-201ENST00000376259 EIF2AK1Q9BQI3 630 aaKnown RBP15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms