RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 SEMA3FQ13275 785 aa14.71□□□□□ -0.05
C9orf47-203ENST00000375851 TTC19Q6DKK2 380 aaPredicted RBP14.71□□□□□ -0.05
C9orf47-203ENST00000375851 CYP4F22Q6NT55 531 aa14.71□□□□□ -0.05
C9orf47-203ENST00000375851 SCARA5Q6ZMJ2 495 aa14.71□□□□□ -0.05
C9orf47-203ENST00000375851 RSRC1Q96IZ7 334 aaKnown RBP14.71□□□□□ -0.05
C9orf47-203ENST00000375851 POLR1AO95602 1720 aaPredicted RBP14.71□□□□□ -0.05
C9orf47-203ENST00000375851 LRRD1A4D1F6 860 aa14.71□□□□□ -0.05
C9orf47-203ENST00000375851 FBXO38Q6PIJ6 1188 aa14.71□□□□□ -0.05
C9orf47-203ENST00000375851 BARGINQ6ZT62 677 aa14.71□□□□□ -0.05
C9orf47-203ENST00000375851 KSR1Q8IVT5 923 aa14.71□□□□□ -0.05
C9orf47-203ENST00000375851 TRIM9Q9C026 710 aa14.71□□□□□ -0.05
C9orf47-203ENST00000375851 SEL1LQ9UBV2 794 aa14.71□□□□□ -0.05
C9orf47-203ENST00000375851 PNMA3Q9UL41 463 aa14.71□□□□□ -0.05
C9orf47-203ENST00000375851 FAN1Q9Y2M0 1017 aa14.71□□□□□ -0.05
C9orf47-203ENST00000375851 IFNAR2P48551 515 aa14.71□□□□□ -0.05
C9orf47-203ENST00000375851 PDIA5Q14554 519 aa14.71□□□□□ -0.05
C9orf47-203ENST00000375851 NAALADL2Q58DX5 795 aa14.71□□□□□ -0.05
C9orf47-203ENST00000375851 USP49Q70CQ1 688 aa14.71□□□□□ -0.05
C9orf47-203ENST00000375851 RSRC2Q7L4I2 434 aaKnown RBP14.71□□□□□ -0.05
C9orf47-203ENST00000375851 LDHDQ86WU2 507 aa14.71□□□□□ -0.05
C9orf47-203ENST00000375851 ADGRG1Q9Y653 693 aa14.71□□□□□ -0.05
C9orf47-203ENST00000375851 CLDN3O15551 220 aa14.71□□□□□ -0.06
C9orf47-203ENST00000375851 CTDNEP1O95476 244 aa14.71□□□□□ -0.06
C9orf47-203ENST00000375851 DYNLT1P63172 113 aa14.71□□□□□ -0.06
C9orf47-203ENST00000375851 KCNB1Q14721 858 aa14.71□□□□□ -0.06
C9orf47-203ENST00000375851 OR6B2Q6IFH4 312 aa14.71□□□□□ -0.06
C9orf47-203ENST00000375851 SPATA24Q86W54 205 aa14.71□□□□□ -0.06
C9orf47-203ENST00000375851 INTS9Q9NV88 658 aaKnown RBP14.71□□□□□ -0.06
C9orf47-203ENST00000375851 PODXL2Q9NZ53 605 aa14.71□□□□□ -0.06
C9orf47-203ENST00000375851 USP32Q8NFA0 1604 aa14.7□□□□□ -0.06
C9orf47-203ENST00000375851 MYO1EQ12965 1108 aa14.7□□□□□ -0.06
C9orf47-203ENST00000375851 LXNQ9BS40 222 aa14.7□□□□□ -0.06
C9orf47-203ENST00000375851 FAM49AQ9H0Q0 323 aaPredicted RBP14.7□□□□□ -0.06
C9orf47-203ENST00000375851 CEP170BQ9Y4F5 1589 aaPredicted RBP14.7□□□□□ -0.06
C9orf47-203ENST00000375851 RASA1P20936 1047 aa14.7□□□□□ -0.06
C9orf47-203ENST00000375851 SFNP31947 248 aa14.7□□□□□ -0.06
C9orf47-203ENST00000375851 CEP55Q53EZ4 464 aa14.7□□□□□ -0.06
C9orf47-203ENST00000375851 EIF2AK1Q9BQI3 630 aaKnown RBP14.7□□□□□ -0.06
C9orf47-203ENST00000375851 ABCB6Q9NP58 842 aa14.7□□□□□ -0.06
C9orf47-203ENST00000375851 DENND3A2RUS2 1198 aa14.7□□□□□ -0.06
C9orf47-203ENST00000375851 PALMO75781 387 aa14.7□□□□□ -0.06
C9orf47-203ENST00000375851 ITKQ08881 620 aa14.7□□□□□ -0.06
C9orf47-203ENST00000375851 IQCB1Q15051 598 aa14.7□□□□□ -0.06
C9orf47-203ENST00000375851 GABBR1Q9UBS5 961 aa14.7□□□□□ -0.06
C9orf47-203ENST00000375851 BAIAP2L1Q9UHR4 511 aa14.7□□□□□ -0.06
C9orf47-203ENST00000375851 ANAPC5Q9UJX4 755 aa14.7□□□□□ -0.06
C9orf47-203ENST00000375851 IQGAP1P46940 1657 aa14.7□□□□□ -0.06
C9orf47-203ENST00000375851 NDUFB10O96000 172 aa14.69□□□□□ -0.06
C9orf47-203ENST00000375851 RASSF2P50749 326 aa14.69□□□□□ -0.06
C9orf47-203ENST00000375851 MRPS25P82663 173 aaKnown RBP14.69□□□□□ -0.06
C9orf47-203ENST00000375851 CASP8Q14790 479 aa14.69□□□□□ -0.06
C9orf47-203ENST00000375851 MAPK6Q16659 721 aa14.69□□□□□ -0.06
C9orf47-203ENST00000375851 TCP11Q8WWU5 503 aa14.69□□□□□ -0.06
C9orf47-203ENST00000375851 DPF2Q92785 391 aa14.69□□□□□ -0.06
C9orf47-203ENST00000375851 PFDN4Q9NQP4 134 aa14.69□□□□□ -0.06
C9orf47-203ENST00000375851 SPATA31A5Q5VU36 1347 aa14.69□□□□□ -0.06
C9orf47-203ENST00000375851 SPATA31A7Q8IWB4 1347 aa14.69□□□□□ -0.06
C9orf47-203ENST00000375851 EIF3CLB5ME19 914 aaKnown RBP14.69□□□□□ -0.06
C9orf47-203ENST00000375851 FGGP02679 453 aa14.69□□□□□ -0.06
C9orf47-203ENST00000375851 ZNF394Q53GI3 561 aa14.69□□□□□ -0.06
C9orf47-203ENST00000375851 SWSAP1Q6NVH7 229 aa14.69□□□□□ -0.06
C9orf47-203ENST00000375851 ABI1Q8IZP0 508 aa14.69□□□□□ -0.06
C9orf47-203ENST00000375851 FAM167AQ96KS9 214 aa14.69□□□□□ -0.06
C9orf47-203ENST00000375851 EIF3CQ99613 913 aaKnown RBP14.69□□□□□ -0.06
C9orf47-203ENST00000375851 NBPF3Q9H094 633 aa14.69□□□□□ -0.06
C9orf47-203ENST00000375851 KIAA1586Q9HCI6 787 aa14.69□□□□□ -0.06
C9orf47-203ENST00000375851 SRGAP2O75044 1071 aa14.69□□□□□ -0.06
C9orf47-203ENST00000375851 RWDD2BP57060 319 aa14.69□□□□□ -0.06
C9orf47-203ENST00000375851 CDC42EP5Q6NZY7 148 aa14.69□□□□□ -0.06
C9orf47-203ENST00000375851 LRRC4Q9HBW1 653 aa14.69□□□□□ -0.06
C9orf47-203ENST00000375851 REREQ9P2R6 1566 aa14.69□□□□□ -0.06
C9orf47-203ENST00000375851 USP27XA6NNY8 438 aa14.69□□□□□ -0.06
C9orf47-203ENST00000375851 MCF2LO15068 1137 aa14.69□□□□□ -0.06
C9orf47-203ENST00000375851 INHBAP08476 426 aa14.69□□□□□ -0.06
C9orf47-203ENST00000375851 PCK1P35558 622 aa14.69□□□□□ -0.06
C9orf47-203ENST00000375851 GFPT1Q06210 699 aaPredicted RBP14.69□□□□□ -0.06
C9orf47-203ENST00000375851 ZNF667Q5HYK9 610 aa14.69□□□□□ -0.06
C9orf47-203ENST00000375851 CDKL2Q92772 493 aa14.69□□□□□ -0.06
C9orf47-203ENST00000375851 HEXIM2Q96MH2 286 aaKnown RBP14.69□□□□□ -0.06
C9orf47-203ENST00000375851 FDX1P10109 184 aa14.68□□□□□ -0.06
C9orf47-203ENST00000375851 PSMC5P62195 406 aa14.68□□□□□ -0.06
C9orf47-203ENST00000375851 ANKRD40Q6AI12 368 aa14.68□□□□□ -0.06
C9orf47-203ENST00000375851 FAM213AQ9BRX8 229 aa14.68□□□□□ -0.06
C9orf47-203ENST00000375851 RGL1Q9NZL6 768 aa14.68□□□□□ -0.06
C9orf47-203ENST00000375851 AFG3L2Q9Y4W6 797 aa14.68□□□□□ -0.06
C9orf47-203ENST00000375851 CNTNAP4Q9C0A0 1308 aa14.68□□□□□ -0.06
C9orf47-203ENST00000375851 ANO9A1A5B4 782 aa14.68□□□□□ -0.06
C9orf47-203ENST00000375851 CCDC188H7C350 402 aa14.68□□□□□ -0.06
C9orf47-203ENST00000375851 DR1Q01658 176 aa14.68□□□□□ -0.06
C9orf47-203ENST00000375851 HHIPL2Q6UWX4 724 aa14.68□□□□□ -0.06
C9orf47-203ENST00000375851 C16orf86Q6ZW13 317 aa14.68□□□□□ -0.06
C9orf47-203ENST00000375851 ERICH1Q86X53 443 aa14.68□□□□□ -0.06
C9orf47-203ENST00000375851 CCNYQ8ND76 341 aa14.68□□□□□ -0.06
C9orf47-203ENST00000375851 PPP4R1Q8TF05 950 aa14.68□□□□□ -0.06
C9orf47-203ENST00000375851 SLC38A10Q9HBR0 1119 aa14.68□□□□□ -0.06
C9orf47-203ENST00000375851 ADAM22Q9P0K1 906 aa14.68□□□□□ -0.06
C9orf47-203ENST00000375851 ZNRF3Q9ULT6 936 aa14.68□□□□□ -0.06
C9orf47-203ENST00000375851 A0A1W2PQC6 194 aa14.68□□□□□ -0.06
C9orf47-203ENST00000375851 CCT5P48643 541 aa14.68□□□□□ -0.06
C9orf47-203ENST00000375851 TPD52P55327 224 aaPredicted RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms