RNA–Protein interactions for RNA: ENST00000375640.7

C6orf48-205, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 1,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-205ENST00000375640 TMEM62Q0P6H9 643 aa22.52■■□□□ 1.2
C6orf48-205ENST00000375640 FAM117BQ6P1L5 589 aa22.52■■□□□ 1.2
C6orf48-205ENST00000375640 DIS3L2Q8IYB7 885 aaKnown RBP22.52■■□□□ 1.2
C6orf48-205ENST00000375640 TET1Q8NFU7 2136 aa22.51■■□□□ 1.19
C6orf48-205ENST00000375640 TRIP12Q14669 1992 aaPredicted RBP22.51■■□□□ 1.19
C6orf48-205ENST00000375640 RBAK-RBAKDNI3L0D1 243 aa22.51■■□□□ 1.19
C6orf48-205ENST00000375640 ENPP3O14638 875 aa22.51■■□□□ 1.19
C6orf48-205ENST00000375640 MARCH6O60337 910 aa22.51■■□□□ 1.19
C6orf48-205ENST00000375640 HMGN5P82970 282 aaKnown RBP22.51■■□□□ 1.19
C6orf48-205ENST00000375640 HTRA4P83105 476 aaPredicted RBP22.51■■□□□ 1.19
C6orf48-205ENST00000375640 PRKCEQ02156 737 aa22.51■■□□□ 1.19
C6orf48-205ENST00000375640 PPP2R5CQ13362 524 aa22.51■■□□□ 1.19
C6orf48-205ENST00000375640 ADGRE1Q14246 886 aa22.51■■□□□ 1.19
C6orf48-205ENST00000375640 AGO3Q9H9G7 860 aaKnown RBP22.51■■□□□ 1.19
C6orf48-205ENST00000375640 LCHNA4D1U4 455 aa22.5■■□□□ 1.19
C6orf48-205ENST00000375640 ARHGEF15O94989 841 aa22.5■■□□□ 1.19
C6orf48-205ENST00000375640 BAG4O95429 457 aaKnown RBP22.5■■□□□ 1.19
C6orf48-205ENST00000375640 SAFBQ15424 915 aaKnown RBP eCLIP22.5■■□□□ 1.19
C6orf48-205ENST00000375640 UGCGQ16739 394 aa22.5■■□□□ 1.19
C6orf48-205ENST00000375640 XKR3Q5GH77 459 aa22.5■■□□□ 1.19
C6orf48-205ENST00000375640 ZNF710Q8N1W2 664 aa22.5■■□□□ 1.19
C6orf48-205ENST00000375640 METTL13Q8N6R0 699 aa22.5■■□□□ 1.19
C6orf48-205ENST00000375640 HAS1Q92839 578 aa22.5■■□□□ 1.19
C6orf48-205ENST00000375640 FTHL17Q9BXU8 183 aa22.5■■□□□ 1.19
C6orf48-205ENST00000375640 NIFKQ9BYG3 293 aaKnown RBP22.5■■□□□ 1.19
C6orf48-205ENST00000375640 FAM205CA6NFA0 338 aa22.49■■□□□ 1.19
C6orf48-205ENST00000375640 IGFBP4P22692 258 aa22.49■■□□□ 1.19
C6orf48-205ENST00000375640 TMOD1P28289 359 aa22.49■■□□□ 1.19
C6orf48-205ENST00000375640 CD52P31358 61 aa22.49■■□□□ 1.19
C6orf48-205ENST00000375640 PSMC5P62195 406 aa22.49■■□□□ 1.19
C6orf48-205ENST00000375640 SLFN12Q8IYM2 578 aa22.49■■□□□ 1.19
C6orf48-205ENST00000375640 ARNTL2Q8WYA1 636 aa22.49■■□□□ 1.19
C6orf48-205ENST00000375640 C8orf76Q96K31 380 aa22.49■■□□□ 1.19
C6orf48-205ENST00000375640 CERS4Q9HA82 394 aa22.49■■□□□ 1.19
C6orf48-205ENST00000375640 VAV3Q9UKW4 847 aa22.49■■□□□ 1.19
C6orf48-205ENST00000375640 PADI3Q9ULW8 664 aa22.49■■□□□ 1.19
C6orf48-205ENST00000375640 ST18O60284 1047 aa22.48■■□□□ 1.19
C6orf48-205ENST00000375640 DKC1O60832 514 aaKnown RBP eCLIP22.48■■□□□ 1.191e-323■■□□□ 14.2
C6orf48-205ENST00000375640 POU3F3P20264 500 aaPredicted RBP22.48■■□□□ 1.19
C6orf48-205ENST00000375640 FOSBP53539 338 aa22.48■■□□□ 1.19
C6orf48-205ENST00000375640 CRYBB1P53674 252 aaPredicted RBP22.48■■□□□ 1.19
C6orf48-205ENST00000375640 TARBP2Q15633 366 aaKnown RBP22.48■■□□□ 1.19
C6orf48-205ENST00000375640 ODR4Q5SWX8 454 aa22.48■■□□□ 1.19
C6orf48-205ENST00000375640 EFCAB12Q6NXP0 572 aa22.48■■□□□ 1.19
C6orf48-205ENST00000375640 SP7Q8TDD2 431 aaPredicted RBP22.48■■□□□ 1.19
C6orf48-205ENST00000375640 TGS1Q96RS0 853 aaKnown RBP22.48■■□□□ 1.19
C6orf48-205ENST00000375640 GINS2Q9Y248 185 aa22.48■■□□□ 1.19
C6orf48-205ENST00000375640 LINC01553A4QN01 128 aa22.47■■□□□ 1.19
C6orf48-205ENST00000375640 EML1O00423 815 aa22.47■■□□□ 1.19
C6orf48-205ENST00000375640 UPP2O95045 317 aa22.47■■□□□ 1.19
C6orf48-205ENST00000375640 STBD1O95210 358 aa22.47■■□□□ 1.19
C6orf48-205ENST00000375640 ERVK-21P61565 698 aa22.47■■□□□ 1.19
C6orf48-205ENST00000375640 PAK2Q13177 524 aa22.47■■□□□ 1.19
C6orf48-205ENST00000375640 POTEDQ86YR6 584 aa22.47■■□□□ 1.19
C6orf48-205ENST00000375640 LINC01465Q8N7H1 131 aa22.47■■□□□ 1.19
C6orf48-205ENST00000375640 FAM184AQ8NB25 1140 aa22.47■■□□□ 1.19
C6orf48-205ENST00000375640 MAP7D2Q96T17 732 aa22.47■■□□□ 1.19
C6orf48-205ENST00000375640 YME1L1Q96TA2 773 aa22.47■■□□□ 1.19
C6orf48-205ENST00000375640 COL6A3P12111 3177 aa22.46■■□□□ 1.19
C6orf48-205ENST00000375640 DDX11L8A8MPP1 907 aa22.46■■□□□ 1.19
C6orf48-205ENST00000375640 RFXAPO00287 272 aa22.46■■□□□ 1.19
C6orf48-205ENST00000375640 GPR32O75388 356 aa22.46■■□□□ 1.19
C6orf48-205ENST00000375640 P4HBP07237 508 aaKnown RBP22.46■■□□□ 1.19
C6orf48-205ENST00000375640 QARSP47897 775 aaKnown RBP22.46■■□□□ 1.19
C6orf48-205ENST00000375640 TBC1D8BQ0IIM8 1120 aa22.46■■□□□ 1.19
C6orf48-205ENST00000375640 EPHA7Q15375 998 aa22.46■■□□□ 1.19
C6orf48-205ENST00000375640 RTN4RL1Q86UN2 441 aaPredicted RBP22.46■■□□□ 1.19
C6orf48-205ENST00000375640 FBXO18Q8NFZ0 1043 aa22.46■■□□□ 1.19
C6orf48-205ENST00000375640 CDHR5Q9HBB8 845 aa22.46■■□□□ 1.19
C6orf48-205ENST00000375640 CDH23Q9H251 3354 aa22.46■■□□□ 1.19
C6orf48-205ENST00000375640 EPOPA6NHQ4 379 aa22.45■■□□□ 1.18
C6orf48-205ENST00000375640 GPR182O15218 404 aa22.45■■□□□ 1.18
C6orf48-205ENST00000375640 GTPBP6O43824 516 aaPredicted RBP22.45■■□□□ 1.18
C6orf48-205ENST00000375640 RPS6KA5O75582 802 aa22.45■■□□□ 1.18
C6orf48-205ENST00000375640 CLCN3P51790 818 aa22.45■■□□□ 1.18
C6orf48-205ENST00000375640 GUCY1B3Q02153 619 aa22.45■■□□□ 1.18
C6orf48-205ENST00000375640 KIZQ2M2Z5 673 aa22.45■■□□□ 1.18
C6orf48-205ENST00000375640 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.45■■□□□ 1.18
C6orf48-205ENST00000375640 BANK1Q8NDB2 785 aa22.45■■□□□ 1.18
C6orf48-205ENST00000375640 TSPYL2Q9H2G4 693 aaPredicted RBP22.45■■□□□ 1.18
C6orf48-205ENST00000375640 FOXP1Q9H334 677 aaPredicted RBP22.45■■□□□ 1.18
C6orf48-205ENST00000375640 SUGCTQ9HAC7 445 aa22.45■■□□□ 1.18
C6orf48-205ENST00000375640 SEPT9Q9UHD8 586 aaPredicted RBP22.45■■□□□ 1.18
C6orf48-205ENST00000375640 NOC2LQ9Y3T9 749 aaKnown RBP22.45■■□□□ 1.18
C6orf48-205ENST00000375640 VTNP04004 478 aa22.44■■□□□ 1.18
C6orf48-205ENST00000375640 CDC42EP1Q00587 391 aa22.44■■□□□ 1.18
C6orf48-205ENST00000375640 NFX1Q12986 1120 aaKnown RBP22.44■■□□□ 1.18
C6orf48-205ENST00000375640 CALCRLQ16602 461 aa22.44■■□□□ 1.18
C6orf48-205ENST00000375640 LRRC71Q8N4P6 559 aa22.44■■□□□ 1.18
C6orf48-205ENST00000375640 CEP89Q96ST8 783 aa22.44■■□□□ 1.18
C6orf48-205ENST00000375640 ERVK-5Q9HDB9 667 aa22.44■■□□□ 1.18
C6orf48-205ENST00000375640 PCDHA12Q9UN75 941 aa22.44■■□□□ 1.18
C6orf48-205ENST00000375640 AKT3Q9Y243 479 aa22.44■■□□□ 1.18
C6orf48-205ENST00000375640 NLRP11P59045 1033 aaKnown RBP22.43■■□□□ 1.18
C6orf48-205ENST00000375640 SPIRE1Q08AE8 756 aa22.43■■□□□ 1.18
C6orf48-205ENST00000375640 TMEM266Q2M3C6 531 aa22.43■■□□□ 1.18
C6orf48-205ENST00000375640 MTERF2Q49AM1 385 aa22.43■■□□□ 1.18
C6orf48-205ENST00000375640 ANO5Q75V66 913 aa22.43■■□□□ 1.18
C6orf48-205ENST00000375640 SPRED2Q7Z698 418 aa22.43■■□□□ 1.18
C6orf48-205ENST00000375640 TMEM40Q8WWA1 233 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms