RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 IL17AQ16552 155 aa17.94■□□□□ 0.46
C11orf88-202ENST00000375618 XKR3Q5GH77 459 aa17.94■□□□□ 0.46
C11orf88-202ENST00000375618 FERMT3Q86UX7 667 aa17.94■□□□□ 0.46
C11orf88-202ENST00000375618 EIF2AK1Q9BQI3 630 aaKnown RBP17.94■□□□□ 0.46
C11orf88-202ENST00000375618 LXNQ9BS40 222 aa17.94■□□□□ 0.46
C11orf88-202ENST00000375618 NIFKQ9BYG3 293 aaKnown RBP17.94■□□□□ 0.46
C11orf88-202ENST00000375618 CDHR5Q9HBB8 845 aa17.94■□□□□ 0.46
C11orf88-202ENST00000375618 SEPT9Q9UHD8 586 aaPredicted RBP17.94■□□□□ 0.46
C11orf88-202ENST00000375618 CDY2AQ9Y6F7 541 aa17.94■□□□□ 0.46
C11orf88-202ENST00000375618 VPS37CA5D8V6 355 aaPredicted RBP17.93■□□□□ 0.46
C11orf88-202ENST00000375618 DDX11L8A8MPP1 907 aa17.93■□□□□ 0.46
C11orf88-202ENST00000375618 SLITRK3O94933 977 aa17.93■□□□□ 0.46
C11orf88-202ENST00000375618 P4HBP07237 508 aaKnown RBP17.93■□□□□ 0.46
C11orf88-202ENST00000375618 TECP42680 631 aa17.93■□□□□ 0.46
C11orf88-202ENST00000375618 CLCN3P51790 818 aa17.93■□□□□ 0.46
C11orf88-202ENST00000375618 NPEPPSP55786 919 aa17.93■□□□□ 0.46
C11orf88-202ENST00000375618 PTGDRQ13258 359 aa17.93■□□□□ 0.46
C11orf88-202ENST00000375618 MKRN4PQ13434 485 aaPredicted RBP17.93■□□□□ 0.46
C11orf88-202ENST00000375618 DRP2Q13474 957 aa17.93■□□□□ 0.46
C11orf88-202ENST00000375618 MTERF2Q49AM1 385 aa17.93■□□□□ 0.46
C11orf88-202ENST00000375618 HSCBQ8IWL3 235 aa17.93■□□□□ 0.46
C11orf88-202ENST00000375618 DBF4BQ8NFT6 615 aa17.93■□□□□ 0.46
C11orf88-202ENST00000375618 TNPO1Q92973 898 aaKnown RBP17.93■□□□□ 0.46
C11orf88-202ENST00000375618 HSD17B14Q9BPX1 270 aa17.93■□□□□ 0.46
C11orf88-202ENST00000375618 NRBP2Q9NSY0 501 aa17.93■□□□□ 0.46
C11orf88-202ENST00000375618 A0A087WWV3 80 aa17.92■□□□□ 0.46
C11orf88-202ENST00000375618 SPATA31C1P0DKV0 1188 aa17.92■□□□□ 0.46
C11orf88-202ENST00000375618 GHRP10912 638 aa17.92■□□□□ 0.46
C11orf88-202ENST00000375618 RESTQ13127 1097 aa17.92■□□□□ 0.46
C11orf88-202ENST00000375618 LPIN1Q14693 890 aa17.92■□□□□ 0.46
C11orf88-202ENST00000375618 PLEKHG4Q58EX7 1191 aa17.92■□□□□ 0.46
C11orf88-202ENST00000375618 LRRC71Q8N4P6 559 aa17.92■□□□□ 0.46
C11orf88-202ENST00000375618 PPP1R16BQ96T49 567 aa17.92■□□□□ 0.46
C11orf88-202ENST00000375618 AGO3Q9H9G7 860 aaKnown RBP17.92■□□□□ 0.46
C11orf88-202ENST00000375618 MTMR6Q9Y217 621 aa17.92■□□□□ 0.46
C11orf88-202ENST00000375618 LAMA2P24043 3122 aaKnown RBP17.92■□□□□ 0.46
C11orf88-202ENST00000375618 PTPRSQ13332 1948 aa17.92■□□□□ 0.46
C11orf88-202ENST00000375618 ZBBXA8MT70 800 aa17.91■□□□□ 0.46
C11orf88-202ENST00000375618 PARNO95453 639 aaKnown RBP17.91■□□□□ 0.46
C11orf88-202ENST00000375618 VTNP04004 478 aa17.91■□□□□ 0.46
C11orf88-202ENST00000375618 PBX2P40425 430 aa17.91■□□□□ 0.46
C11orf88-202ENST00000375618 RILPL1Q5EBL4 403 aa17.91■□□□□ 0.46
C11orf88-202ENST00000375618 FBXO47Q5MNV8 452 aa17.91■□□□□ 0.46
C11orf88-202ENST00000375618 EFCAB12Q6NXP0 572 aa17.91■□□□□ 0.46
C11orf88-202ENST00000375618 CNKSR3Q6P9H4 555 aa17.91■□□□□ 0.46
C11orf88-202ENST00000375618 TMCO2Q7Z6W1 182 aaPredicted RBP17.91■□□□□ 0.46
C11orf88-202ENST00000375618 TPH2Q8IWU9 490 aa17.91■□□□□ 0.46
C11orf88-202ENST00000375618 C4orf19Q8IY42 314 aa17.91■□□□□ 0.46
C11orf88-202ENST00000375618 CEP131Q9UPN4 1083 aa17.91■□□□□ 0.46
C11orf88-202ENST00000375618 TRPV2Q9Y5S1 764 aa17.91■□□□□ 0.46
C11orf88-202ENST00000375618 EVPLQ92817 2033 aa17.9■□□□□ 0.46
C11orf88-202ENST00000375618 MED24O75448 989 aa17.9■□□□□ 0.46
C11orf88-202ENST00000375618 DEFB103AP81534 67 aa17.9■□□□□ 0.46
C11orf88-202ENST00000375618 FAM173BQ6P4H8 233 aa17.9■□□□□ 0.46
C11orf88-202ENST00000375618 RSPH3Q86UC2 560 aa17.9■□□□□ 0.46
C11orf88-202ENST00000375618 METTL13Q8N6R0 699 aa17.9■□□□□ 0.46
C11orf88-202ENST00000375618 SPRYD3Q8NCJ5 442 aa17.9■□□□□ 0.46
C11orf88-202ENST00000375618 TMEM40Q8WWA1 233 aa17.9■□□□□ 0.46
C11orf88-202ENST00000375618 CELF4Q9BZC1 486 aaKnown RBP17.9■□□□□ 0.46
C11orf88-202ENST00000375618 ZSWIM4Q9H7M6 989 aa17.9■□□□□ 0.46
C11orf88-202ENST00000375618 IGKV6-21A0A0C4DH24 114 aa17.89■□□□□ 0.45
C11orf88-202ENST00000375618 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.89■□□□□ 0.45
C11orf88-202ENST00000375618 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.89■□□□□ 0.45
C11orf88-202ENST00000375618 PP2D1A8MPX8 630 aa17.89■□□□□ 0.45
C11orf88-202ENST00000375618 MAGEB2O15479 319 aa17.89■□□□□ 0.45
C11orf88-202ENST00000375618 GPR32O75388 356 aa17.89■□□□□ 0.45
C11orf88-202ENST00000375618 LYPLA2O95372 231 aa17.89■□□□□ 0.45
C11orf88-202ENST00000375618 ACTN1P12814 892 aa17.89■□□□□ 0.45
C11orf88-202ENST00000375618 PDCP20941 246 aa17.89■□□□□ 0.45
C11orf88-202ENST00000375618 YWHABP31946 246 aaKnown RBP17.89■□□□□ 0.45
C11orf88-202ENST00000375618 FXR2P51116 673 aaKnown RBP eCLIP17.89■□□□□ 0.45
C11orf88-202ENST00000375618 RABGGTBP53611 331 aa17.89■□□□□ 0.45
C11orf88-202ENST00000375618 WDR5P61964 334 aaKnown RBP17.89■□□□□ 0.45
C11orf88-202ENST00000375618 SMAD3P84022 425 aaKnown RBP17.89■□□□□ 0.45
C11orf88-202ENST00000375618 ATP2C1P98194 919 aaPredicted RBP17.89■□□□□ 0.45
C11orf88-202ENST00000375618 TBC1D8BQ0IIM8 1120 aa17.89■□□□□ 0.45
C11orf88-202ENST00000375618 ECM1Q16610 540 aa17.89■□□□□ 0.45
C11orf88-202ENST00000375618 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.89■□□□□ 0.45
C11orf88-202ENST00000375618 CATSPER3Q86XQ3 398 aa17.89■□□□□ 0.45
C11orf88-202ENST00000375618 ZNF668Q96K58 619 aaPredicted RBP17.89■□□□□ 0.45
C11orf88-202ENST00000375618 SUGCTQ9HAC7 445 aa17.89■□□□□ 0.45
C11orf88-202ENST00000375618 CYP26B1Q9NR63 512 aa17.89■□□□□ 0.45
C11orf88-202ENST00000375618 SLC4A7Q9Y6M7 1214 aa17.89■□□□□ 0.45
C11orf88-202ENST00000375618 KDM3AQ9Y4C1 1321 aa17.89■□□□□ 0.45
C11orf88-202ENST00000375618 BAIAP3O94812 1187 aa17.88■□□□□ 0.45
C11orf88-202ENST00000375618 MYOGP15173 224 aa17.88■□□□□ 0.45
C11orf88-202ENST00000375618 CD52P31358 61 aa17.88■□□□□ 0.45
C11orf88-202ENST00000375618 KIZQ2M2Z5 673 aa17.88■□□□□ 0.45
C11orf88-202ENST00000375618 IER5Q5VY09 327 aa17.88■□□□□ 0.45
C11orf88-202ENST00000375618 Q7L0L9 218 aa17.88■□□□□ 0.45
C11orf88-202ENST00000375618 NME8Q8N427 588 aa17.88■□□□□ 0.45
C11orf88-202ENST00000375618 IGSF22Q8N9C0 903 aa17.88■□□□□ 0.45
C11orf88-202ENST00000375618 CEP170P1Q96L14 293 aa17.88■□□□□ 0.45
C11orf88-202ENST00000375618 PBX4Q9BYU1 374 aa17.88■□□□□ 0.45
C11orf88-202ENST00000375618 IFIH1Q9BYX4 1025 aaKnown RBP17.88■□□□□ 0.45
C11orf88-202ENST00000375618 ADAMTS10Q9H324 1103 aa17.88■□□□□ 0.45
C11orf88-202ENST00000375618 BMP2KQ9NSY1 1161 aaPredicted RBP17.88■□□□□ 0.45
C11orf88-202ENST00000375618 YBX2Q9Y2T7 364 aaKnown RBP17.88■□□□□ 0.45
C11orf88-202ENST00000375618 ARID2Q68CP9 1835 aa17.88■□□□□ 0.45
C11orf88-202ENST00000375618 SZT2Q5T011 3432 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms