RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 TDP2O95551 362 aa12.43□□□□□ -0.42
PTCH1-203ENST00000375274 GPC5P78333 572 aa12.43□□□□□ -0.42
PTCH1-203ENST00000375274 PDIK1LQ8N165 341 aa12.43□□□□□ -0.42
PTCH1-203ENST00000375274 NRBP2Q9NSY0 501 aa12.43□□□□□ -0.42
PTCH1-203ENST00000375274 TPX2Q9ULW0 747 aaKnown RBP12.43□□□□□ -0.42
PTCH1-203ENST00000375274 MCF2LO15068 1137 aa12.42□□□□□ -0.42
PTCH1-203ENST00000375274 MAPK13O15264 365 aa12.42□□□□□ -0.42
PTCH1-203ENST00000375274 POLD1P28340 1107 aa12.42□□□□□ -0.42
PTCH1-203ENST00000375274 NAALADL2Q58DX5 795 aa12.42□□□□□ -0.42
PTCH1-203ENST00000375274 PAXIP1Q6ZW49 1069 aaPredicted RBP12.42□□□□□ -0.42
PTCH1-203ENST00000375274 ADPGKQ9BRR6 497 aa12.42□□□□□ -0.42
PTCH1-203ENST00000375274 SLITRK6Q9H5Y7 841 aa12.42□□□□□ -0.42
PTCH1-203ENST00000375274 SENP2Q9HC62 589 aa12.42□□□□□ -0.42
PTCH1-203ENST00000375274 ANAPC7Q9UJX3 599 aa12.42□□□□□ -0.42
PTCH1-203ENST00000375274 RIMBP3CA6NJZ7 1639 aa12.42□□□□□ -0.42
PTCH1-203ENST00000375274 RIMBP3BA6NNM3 1639 aa12.42□□□□□ -0.42
PTCH1-203ENST00000375274 RIMBP3Q9UFD9 1639 aa12.42□□□□□ -0.42
PTCH1-203ENST00000375274 CLRN2A0PK11 232 aa12.42□□□□□ -0.42
PTCH1-203ENST00000375274 ZRANB2O95218 330 aaKnown RBP eCLIP12.42□□□□□ -0.42
PTCH1-203ENST00000375274 CYP19A1P11511 503 aaPredicted RBP12.42□□□□□ -0.42
PTCH1-203ENST00000375274 SKIP12755 728 aa12.42□□□□□ -0.42
PTCH1-203ENST00000375274 FAM47EQ6ZV65 393 aa12.42□□□□□ -0.42
PTCH1-203ENST00000375274 HVCN1Q96D96 273 aa12.42□□□□□ -0.42
PTCH1-203ENST00000375274 GPR101Q96P66 508 aaPredicted RBP12.42□□□□□ -0.42
PTCH1-203ENST00000375274 CALN1Q9BXU9 219 aa12.42□□□□□ -0.42
PTCH1-203ENST00000375274 DBNDD1Q9H9R9 158 aa12.42□□□□□ -0.42
PTCH1-203ENST00000375274 FBXL5Q9UKA1 691 aa12.42□□□□□ -0.42
PTCH1-203ENST00000375274 HPS5Q9UPZ3 1129 aa12.42□□□□□ -0.42
PTCH1-203ENST00000375274 RHOBTB3O94955 611 aa12.42□□□□□ -0.42
PTCH1-203ENST00000375274 PMS2P54278 862 aa12.42□□□□□ -0.42
PTCH1-203ENST00000375274 RPS6KA2Q15349 733 aa12.42□□□□□ -0.42
PTCH1-203ENST00000375274 NLGN1Q8N2Q7 840 aa12.42□□□□□ -0.42
PTCH1-203ENST00000375274 SH2D3CQ8N5H7 860 aa12.42□□□□□ -0.42
PTCH1-203ENST00000375274 HPS3Q969F9 1004 aa12.42□□□□□ -0.42
PTCH1-203ENST00000375274 AS3MTQ9HBK9 375 aa12.42□□□□□ -0.42
PTCH1-203ENST00000375274 CNOT8Q9UFF9 292 aaKnown RBP12.42□□□□□ -0.42
PTCH1-203ENST00000375274 AMACRQ9UHK6 382 aa12.42□□□□□ -0.42
PTCH1-203ENST00000375274 NOC2LQ9Y3T9 749 aaKnown RBP12.42□□□□□ -0.42
PTCH1-203ENST00000375274 MYO3AQ8NEV4 1616 aa12.42□□□□□ -0.42
PTCH1-203ENST00000375274 GRIN1Q05586 938 aa12.42□□□□□ -0.42
PTCH1-203ENST00000375274 RBBP5Q15291 538 aaKnown RBP12.42□□□□□ -0.42
PTCH1-203ENST00000375274 CENPUQ71F23 418 aa12.42□□□□□ -0.42
PTCH1-203ENST00000375274 CEP120Q8N960 986 aa12.42□□□□□ -0.42
PTCH1-203ENST00000375274 FBXO41Q8TF61 875 aa12.42□□□□□ -0.42
PTCH1-203ENST00000375274 TUBB6Q9BUF5 446 aa12.42□□□□□ -0.42
PTCH1-203ENST00000375274 STK32BQ9NY57 414 aa12.42□□□□□ -0.42
PTCH1-203ENST00000375274 PSD3Q9NYI0 1048 aa12.42□□□□□ -0.42
PTCH1-203ENST00000375274 PCDHA6Q9UN73 950 aa12.42□□□□□ -0.42
PTCH1-203ENST00000375274 CLEC11AQ9Y240 323 aa12.42□□□□□ -0.42
PTCH1-203ENST00000375274 PCDHA8Q9Y5H6 950 aa12.42□□□□□ -0.42
PTCH1-203ENST00000375274 UTYO14607 1347 aa12.41□□□□□ -0.42
PTCH1-203ENST00000375274 SSU72P8A0A1W2PR75 194 aa12.41□□□□□ -0.42
PTCH1-203ENST00000375274 CAPN9O14815 690 aa12.41□□□□□ -0.42
PTCH1-203ENST00000375274 H2AFXP16104 143 aaPredicted RBP12.41□□□□□ -0.42
PTCH1-203ENST00000375274 HDLBPQ00341 1268 aaKnown RBP12.41□□□□□ -0.42
PTCH1-203ENST00000375274 STK4Q13043 487 aa12.41□□□□□ -0.42
PTCH1-203ENST00000375274 DRAP1Q14919 205 aaPredicted RBP12.41□□□□□ -0.42
PTCH1-203ENST00000375274 SH2D4BQ5SQS7 431 aa12.41□□□□□ -0.42
PTCH1-203ENST00000375274 SRRM1Q8IYB3 904 aaKnown RBP12.41□□□□□ -0.42
PTCH1-203ENST00000375274 PYROXD1Q8WU10 500 aa12.41□□□□□ -0.42
PTCH1-203ENST00000375274 HNRNPLLQ8WVV9 542 aaKnown RBP12.41□□□□□ -0.42
PTCH1-203ENST00000375274 FAM20AQ96MK3 541 aa12.41□□□□□ -0.42
PTCH1-203ENST00000375274 PLA2G12BQ9BX93 195 aa12.41□□□□□ -0.42
PTCH1-203ENST00000375274 OVOS2A0A0J9YW53 1432 aa12.41□□□□□ -0.42
PTCH1-203ENST00000375274 OVOS2Q6IE36 1432 aa12.41□□□□□ -0.42
PTCH1-203ENST00000375274 POTEFA5A3E0 1075 aa12.41□□□□□ -0.42
PTCH1-203ENST00000375274 RASA4BC9J798 803 aa12.41□□□□□ -0.42
PTCH1-203ENST00000375274 ZBTB22O15209 634 aa12.41□□□□□ -0.42
PTCH1-203ENST00000375274 MEFVO15553 781 aaPredicted RBP12.41□□□□□ -0.42
PTCH1-203ENST00000375274 RASA4O43374 803 aa12.41□□□□□ -0.42
PTCH1-203ENST00000375274 POTEIP0CG38 1075 aa12.41□□□□□ -0.42
PTCH1-203ENST00000375274 ESRRAP11474 423 aaPredicted RBP12.41□□□□□ -0.42
PTCH1-203ENST00000375274 GCLMP48507 274 aa12.41□□□□□ -0.42
PTCH1-203ENST00000375274 ACTN3Q08043 901 aaPredicted RBP12.41□□□□□ -0.42
PTCH1-203ENST00000375274 SPARCL1Q14515 664 aa12.41□□□□□ -0.42
PTCH1-203ENST00000375274 DBN1Q16643 649 aa12.41□□□□□ -0.42
PTCH1-203ENST00000375274 POTEGQ6S5H5 508 aa12.41□□□□□ -0.42
PTCH1-203ENST00000375274 POTEEQ6S8J3 1075 aa12.41□□□□□ -0.42
PTCH1-203ENST00000375274 GLYCTKQ8IVS8 523 aa12.41□□□□□ -0.42
PTCH1-203ENST00000375274 XXYLT1Q8NBI6 393 aa12.41□□□□□ -0.42
PTCH1-203ENST00000375274 RUBCNQ92622 972 aa12.41□□□□□ -0.42
PTCH1-203ENST00000375274 CHMP6Q96FZ7 201 aa12.41□□□□□ -0.42
PTCH1-203ENST00000375274 FAM84BQ96KN1 310 aaPredicted RBP12.41□□□□□ -0.42
PTCH1-203ENST00000375274 TRIM4Q9C037 500 aa12.41□□□□□ -0.42
PTCH1-203ENST00000375274 PEX3P56589 373 aa12.41□□□□□ -0.42
PTCH1-203ENST00000375274 PDZD4Q76G19 769 aaPredicted RBP12.41□□□□□ -0.42
PTCH1-203ENST00000375274 FOXP4Q8IVH2 680 aaPredicted RBP12.41□□□□□ -0.42
PTCH1-203ENST00000375274 GSDMBQ8TAX9 411 aa12.41□□□□□ -0.42
PTCH1-203ENST00000375274 USH1CQ9Y6N9 552 aa12.41□□□□□ -0.42
PTCH1-203ENST00000375274 A6NJR5 290 aa12.4□□□□□ -0.42
PTCH1-203ENST00000375274 PSMD14O00487 310 aa12.4□□□□□ -0.42
PTCH1-203ENST00000375274 PLA2G4AP47712 749 aa12.4□□□□□ -0.42
PTCH1-203ENST00000375274 ASPHQ12797 758 aa12.4□□□□□ -0.42
PTCH1-203ENST00000375274 SLC18A3Q16572 532 aa12.4□□□□□ -0.42
PTCH1-203ENST00000375274 NME8Q8N427 588 aa12.4□□□□□ -0.42
PTCH1-203ENST00000375274 THOC1Q96FV9 657 aaKnown RBP12.4□□□□□ -0.42
PTCH1-203ENST00000375274 PPP1R9AQ9ULJ8 1098 aa12.4□□□□□ -0.42
PTCH1-203ENST00000375274 SAT1P21673 171 aa12.4□□□□□ -0.42
PTCH1-203ENST00000375274 CHRNA3P32297 505 aa12.4□□□□□ -0.42
PTCH1-203ENST00000375274 GARSP41250 739 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms