RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 HSDL1Q3SXM5 330 aa19.54■□□□□ 0.72
PFDN6-201ENST00000374606 FAM160B1Q5W0V3 765 aa19.54■□□□□ 0.72
PFDN6-201ENST00000374606 TLK2Q86UE8 772 aa19.54■□□□□ 0.72
PFDN6-201ENST00000374606 CCDC60Q8IWA6 550 aaPredicted RBP19.54■□□□□ 0.72
PFDN6-201ENST00000374606 PPTC7Q8NI37 304 aa19.54■□□□□ 0.72
PFDN6-201ENST00000374606 LRRC15Q8TF66 581 aa19.54■□□□□ 0.72
PFDN6-201ENST00000374606 LARP4BQ92615 738 aaKnown RBP19.54■□□□□ 0.72
PFDN6-201ENST00000374606 RAD54LQ92698 747 aa19.54■□□□□ 0.72
PFDN6-201ENST00000374606 ZNF302Q9NR11 478 aa19.54■□□□□ 0.72
PFDN6-201ENST00000374606 GNEQ9Y223 722 aaKnown RBP19.54■□□□□ 0.72
PFDN6-201ENST00000374606 E9PMD0 336 aa19.53■□□□□ 0.72
PFDN6-201ENST00000374606 LYPLA2O95372 231 aa19.53■□□□□ 0.72
PFDN6-201ENST00000374606 SWSAP1Q6NVH7 229 aa19.53■□□□□ 0.72
PFDN6-201ENST00000374606 KCNK18Q7Z418 384 aa19.53■□□□□ 0.72
PFDN6-201ENST00000374606 AFG1LQ8WV93 481 aa19.53■□□□□ 0.72
PFDN6-201ENST00000374606 LENG1Q96BZ8 264 aaPredicted RBP19.53■□□□□ 0.72
PFDN6-201ENST00000374606 AZI2Q9H6S1 392 aa19.53■□□□□ 0.72
PFDN6-201ENST00000374606 BLOC1S4Q9NUP1 217 aa19.53■□□□□ 0.72
PFDN6-201ENST00000374606 WRAP73Q9P2S5 460 aaPredicted RBP19.53■□□□□ 0.72
PFDN6-201ENST00000374606 PHF24Q9UPV7 400 aa19.53■□□□□ 0.72
PFDN6-201ENST00000374606 DNM3Q9UQ16 869 aa19.53■□□□□ 0.72
PFDN6-201ENST00000374606 EMSYQ7Z589 1322 aa19.52■□□□□ 0.72
PFDN6-201ENST00000374606 MYH9P35579 1960 aaKnown RBP19.52■□□□□ 0.72
PFDN6-201ENST00000374606 IGKV6D-21A0A0A0MT36 114 aa19.52■□□□□ 0.72
PFDN6-201ENST00000374606 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.52■□□□□ 0.72
PFDN6-201ENST00000374606 CLTBP09497 229 aa19.52■□□□□ 0.72
PFDN6-201ENST00000374606 AFMP43652 599 aa19.52■□□□□ 0.72
PFDN6-201ENST00000374606 C4orf19Q8IY42 314 aa19.52■□□□□ 0.72
PFDN6-201ENST00000374606 ELOA2Q8IYF1 753 aaPredicted RBP19.52■□□□□ 0.72
PFDN6-201ENST00000374606 PAGE5Q96GU1 130 aa19.52■□□□□ 0.72
PFDN6-201ENST00000374606 NACC1Q96RE7 527 aa19.52■□□□□ 0.72
PFDN6-201ENST00000374606 AP5M1Q9H0R1 490 aa19.52■□□□□ 0.72
PFDN6-201ENST00000374606 Q9Y3F1 56 aa19.52■□□□□ 0.72
PFDN6-201ENST00000374606 DYNC1LI2O43237 492 aaPredicted RBP19.51■□□□□ 0.71
PFDN6-201ENST00000374606 DUSP11O75319 330 aaKnown RBP19.51■□□□□ 0.71
PFDN6-201ENST00000374606 EYA4O95677 639 aa19.51■□□□□ 0.71
PFDN6-201ENST00000374606 SSBP05455 408 aaKnown RBP eCLIP19.51■□□□□ 0.71
PFDN6-201ENST00000374606 MMP3P08254 477 aa19.51■□□□□ 0.71
PFDN6-201ENST00000374606 PLA2G4BP0C869 781 aa19.51■□□□□ 0.71
PFDN6-201ENST00000374606 RARBP10826 455 aa19.51■□□□□ 0.71
PFDN6-201ENST00000374606 ITGB8P26012 769 aa19.51■□□□□ 0.71
PFDN6-201ENST00000374606 PRKCEQ02156 737 aa19.51■□□□□ 0.71
PFDN6-201ENST00000374606 MCM6Q14566 821 aa19.51■□□□□ 0.71
PFDN6-201ENST00000374606 POSTNQ15063 836 aa19.51■□□□□ 0.71
PFDN6-201ENST00000374606 UTP14CQ5TAP6 766 aaKnown RBP19.51■□□□□ 0.71
PFDN6-201ENST00000374606 SV2BQ7L1I2 683 aa19.51■□□□□ 0.71
PFDN6-201ENST00000374606 GRAMD1CQ8IYS0 662 aa19.51■□□□□ 0.71
PFDN6-201ENST00000374606 AFAP1L1Q8TED9 768 aa19.51■□□□□ 0.71
PFDN6-201ENST00000374606 CCDC43Q96MW1 224 aaKnown RBP19.51■□□□□ 0.71
PFDN6-201ENST00000374606 XPNPEP3Q9NQH7 507 aa19.51■□□□□ 0.71
PFDN6-201ENST00000374606 ARID2Q68CP9 1835 aa19.51■□□□□ 0.71
PFDN6-201ENST00000374606 KIAA0355O15063 1070 aa19.5■□□□□ 0.71
PFDN6-201ENST00000374606 LGR5O75473 907 aa19.5■□□□□ 0.71
PFDN6-201ENST00000374606 RAG1P15918 1043 aa19.5■□□□□ 0.71
PFDN6-201ENST00000374606 CPT1AP50416 773 aa19.5■□□□□ 0.71
PFDN6-201ENST00000374606 STAT5BP51692 787 aa19.5■□□□□ 0.71
PFDN6-201ENST00000374606 EPHB4P54760 987 aa19.5■□□□□ 0.71
PFDN6-201ENST00000374606 PSMC6P62333 389 aa19.5■□□□□ 0.71
PFDN6-201ENST00000374606 AMPD3Q01432 767 aa19.5■□□□□ 0.71
PFDN6-201ENST00000374606 DHX8Q14562 1220 aaKnown RBP19.5■□□□□ 0.71
PFDN6-201ENST00000374606 BRDTQ58F21 947 aaPredicted RBP19.5■□□□□ 0.71
PFDN6-201ENST00000374606 TJAP1Q5JTD0 557 aa19.5■□□□□ 0.71
PFDN6-201ENST00000374606 RNF180Q86T96 592 aa19.5■□□□□ 0.71
PFDN6-201ENST00000374606 CKAP2LQ8IYA6 745 aa19.5■□□□□ 0.71
PFDN6-201ENST00000374606 PIGOQ8TEQ8 1089 aa19.5■□□□□ 0.71
PFDN6-201ENST00000374606 STAMQ92783 540 aa19.5■□□□□ 0.71
PFDN6-201ENST00000374606 GLG1Q92896 1179 aa19.5■□□□□ 0.71
PFDN6-201ENST00000374606 PCYT2Q99447 389 aa19.5■□□□□ 0.71
PFDN6-201ENST00000374606 LRRC27Q9C0I9 530 aa19.5■□□□□ 0.71
PFDN6-201ENST00000374606 BHMT2Q9H2M3 363 aa19.5■□□□□ 0.71
PFDN6-201ENST00000374606 KBTBD4Q9NVX7 518 aa19.5■□□□□ 0.71
PFDN6-201ENST00000374606 MAFBQ9Y5Q3 323 aaPredicted RBP19.5■□□□□ 0.71
PFDN6-201ENST00000374606 GTPBP6O43824 516 aaPredicted RBP19.49■□□□□ 0.71
PFDN6-201ENST00000374606 ZNF862O60290 1169 aa19.49■□□□□ 0.71
PFDN6-201ENST00000374606 LETM1O95202 739 aaPredicted RBP19.49■□□□□ 0.71
PFDN6-201ENST00000374606 OATP04181 439 aa19.49■□□□□ 0.71
PFDN6-201ENST00000374606 LGALS2P05162 132 aa19.49■□□□□ 0.71
PFDN6-201ENST00000374606 PRR29P0C7W0 189 aa19.49■□□□□ 0.71
PFDN6-201ENST00000374606 YWHABP31946 246 aaKnown RBP19.49■□□□□ 0.71
PFDN6-201ENST00000374606 FPGSQ05932 587 aa19.49■□□□□ 0.71
PFDN6-201ENST00000374606 PNOCQ13519 176 aa19.49■□□□□ 0.71
PFDN6-201ENST00000374606 DGKDQ16760 1214 aa19.49■□□□□ 0.71
PFDN6-201ENST00000374606 ZSCAN23Q3MJ62 389 aa19.49■□□□□ 0.71
PFDN6-201ENST00000374606 TRIM50Q86XT4 487 aa19.49■□□□□ 0.71
PFDN6-201ENST00000374606 GZF1Q9H116 711 aaPredicted RBP19.49■□□□□ 0.71
PFDN6-201ENST00000374606 SMARCAD1Q9H4L7 1026 aa19.49■□□□□ 0.71
PFDN6-201ENST00000374606 SEPT9Q9UHD8 586 aaPredicted RBP19.49■□□□□ 0.71
PFDN6-201ENST00000374606 DBR1Q9UK59 544 aaKnown RBP19.49■□□□□ 0.71
PFDN6-201ENST00000374606 A0A087WWV3 80 aa19.48■□□□□ 0.71
PFDN6-201ENST00000374606 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.48■□□□□ 0.71
PFDN6-201ENST00000374606 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.48■□□□□ 0.71
PFDN6-201ENST00000374606 ARHGEF35A5YM69 484 aa19.48■□□□□ 0.71
PFDN6-201ENST00000374606 A6NJR5 290 aa19.48■□□□□ 0.71
PFDN6-201ENST00000374606 PQBP1O60828 265 aaKnown RBP19.48■□□□□ 0.71
PFDN6-201ENST00000374606 MYL1P05976 194 aa19.48■□□□□ 0.71
PFDN6-201ENST00000374606 XRCC6P12956 609 aaKnown RBP eCLIP19.48■□□□□ 0.71
PFDN6-201ENST00000374606 HOXD8P13378 290 aaPredicted RBP19.48■□□□□ 0.71
PFDN6-201ENST00000374606 DNAJB2P25686 324 aa19.48■□□□□ 0.71
PFDN6-201ENST00000374606 SLC26A2P50443 739 aa19.48■□□□□ 0.71
PFDN6-201ENST00000374606 SLC12A3P55017 1021 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms