RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 FSTL1Q12841 308 aa18.62■□□□□ 0.57
PTPN20-203ENST00000374342 ADAM9Q13443 819 aa18.62■□□□□ 0.57
PTPN20-203ENST00000374342 SNAPC2Q13487 334 aa18.62■□□□□ 0.57
PTPN20-203ENST00000374342 ZC2HC1CQ53FD0 456 aaPredicted RBP18.62■□□□□ 0.57
PTPN20-203ENST00000374342 PLA2G4FQ68DD2 849 aa18.62■□□□□ 0.57
PTPN20-203ENST00000374342 GPAT2Q6NUI2 795 aa18.62■□□□□ 0.57
PTPN20-203ENST00000374342 SMAP1Q8IYB5 467 aaPredicted RBP18.62■□□□□ 0.57
PTPN20-203ENST00000374342 SLC10A4Q96EP9 437 aa18.62■□□□□ 0.57
PTPN20-203ENST00000374342 DESI2Q9BSY9 194 aa18.62■□□□□ 0.57
PTPN20-203ENST00000374342 SLC9A2Q9UBY0 812 aa18.62■□□□□ 0.57
PTPN20-203ENST00000374342 UBE4BO95155 1302 aa18.62■□□□□ 0.57
PTPN20-203ENST00000374342 SPATA31C2B4DYI2 1134 aa18.62■□□□□ 0.57
PTPN20-203ENST00000374342 STXBP4Q6ZWJ1 553 aa18.62■□□□□ 0.57
PTPN20-203ENST00000374342 DAW1Q8N136 415 aa18.62■□□□□ 0.57
PTPN20-203ENST00000374342 R3HDMLQ9H3Y0 253 aa18.62■□□□□ 0.57
PTPN20-203ENST00000374342 LUC7L2Q9Y383 392 aaKnown RBP18.62■□□□□ 0.57
PTPN20-203ENST00000374342 ZNFX1Q9P2E3 1918 aaKnown RBP18.62■□□□□ 0.57
PTPN20-203ENST00000374342 ZSCAN12O43309 604 aa18.61■□□□□ 0.57
PTPN20-203ENST00000374342 SLC25A27O95847 323 aa18.61■□□□□ 0.57
PTPN20-203ENST00000374342 FECHP22830 423 aa18.61■□□□□ 0.57
PTPN20-203ENST00000374342 XKR9Q5GH70 373 aa18.61■□□□□ 0.57
PTPN20-203ENST00000374342 RAD9BQ6WBX8 426 aa18.61■□□□□ 0.57
PTPN20-203ENST00000374342 SEPT14Q6ZU15 432 aa18.61■□□□□ 0.57
PTPN20-203ENST00000374342 KSR1Q8IVT5 923 aa18.61■□□□□ 0.57
PTPN20-203ENST00000374342 ZNF592Q92610 1267 aa18.61■□□□□ 0.57
PTPN20-203ENST00000374342 FIZ1Q96SL8 496 aa18.61■□□□□ 0.57
PTPN20-203ENST00000374342 NUP58Q9BVL2 599 aa18.61■□□□□ 0.57
PTPN20-203ENST00000374342 TTYH3Q9C0H2 523 aa18.61■□□□□ 0.57
PTPN20-203ENST00000374342 GABBR1Q9UBS5 961 aa18.61■□□□□ 0.57
PTPN20-203ENST00000374342 CAPN11Q9UMQ6 739 aa18.61■□□□□ 0.57
PTPN20-203ENST00000374342 TELO2Q9Y4R8 837 aa18.61■□□□□ 0.57
PTPN20-203ENST00000374342 PLXNB2O15031 1838 aa18.61■□□□□ 0.57
PTPN20-203ENST00000374342 MCM3APO60318 1980 aa18.61■□□□□ 0.57
PTPN20-203ENST00000374342 SOWAHBA6NEL2 793 aa18.61■□□□□ 0.57
PTPN20-203ENST00000374342 K7ENM7 598 aa18.61■□□□□ 0.57
PTPN20-203ENST00000374342 EIF3JO75822 258 aaKnown RBP18.61■□□□□ 0.57
PTPN20-203ENST00000374342 NR3C1P04150 777 aa18.61■□□□□ 0.57
PTPN20-203ENST00000374342 PSAPP07602 524 aa18.61■□□□□ 0.57
PTPN20-203ENST00000374342 RBPJLQ9UBG7 517 aa18.61■□□□□ 0.57
PTPN20-203ENST00000374342 MARSP56192 900 aaKnown RBP18.6■□□□□ 0.57
PTPN20-203ENST00000374342 ACTR2P61160 394 aa18.6■□□□□ 0.57
PTPN20-203ENST00000374342 ERVK-24P63145 666 aa18.6■□□□□ 0.57
PTPN20-203ENST00000374342 WDR78Q5VTH9 848 aa18.6■□□□□ 0.57
PTPN20-203ENST00000374342 ZNF720Q7Z2F6 126 aa18.6■□□□□ 0.57
PTPN20-203ENST00000374342 TRIM59Q8IWR1 403 aa18.6■□□□□ 0.57
PTPN20-203ENST00000374342 RETREG2Q8NC44 543 aa18.6■□□□□ 0.57
PTPN20-203ENST00000374342 ATP6V0A1Q93050 837 aa18.6■□□□□ 0.57
PTPN20-203ENST00000374342 DNAJC7Q99615 494 aa18.6■□□□□ 0.57
PTPN20-203ENST00000374342 IKZF4Q9H2S9 585 aa18.6■□□□□ 0.57
PTPN20-203ENST00000374342 ANKEF1Q9NU02 776 aa18.6■□□□□ 0.57
PTPN20-203ENST00000374342 SIK3Q9Y2K2 1263 aa18.6■□□□□ 0.57
PTPN20-203ENST00000374342 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.6■□□□□ 0.57
PTPN20-203ENST00000374342 PLXNA1Q9UIW2 1896 aa18.59■□□□□ 0.57
PTPN20-203ENST00000374342 RASSF10A6NK89 507 aa18.59■□□□□ 0.57
PTPN20-203ENST00000374342 CLIC2O15247 247 aa18.59■□□□□ 0.57
PTPN20-203ENST00000374342 COPB2P35606 906 aa18.59■□□□□ 0.57
PTPN20-203ENST00000374342 NPEPPSP55786 919 aa18.59■□□□□ 0.57
PTPN20-203ENST00000374342 MKRN3Q13064 507 aaKnown RBP18.59■□□□□ 0.57
PTPN20-203ENST00000374342 CYP26C1Q6V0L0 522 aa18.59■□□□□ 0.57
PTPN20-203ENST00000374342 REXO1L1PQ8IX06 675 aa18.59■□□□□ 0.57
PTPN20-203ENST00000374342 FAM133AQ8N9E0 248 aa18.59■□□□□ 0.57
PTPN20-203ENST00000374342 SMCR8Q8TEV9 937 aaPredicted RBP18.59■□□□□ 0.57
PTPN20-203ENST00000374342 PRIMPOLQ96LW4 560 aa18.59■□□□□ 0.57
PTPN20-203ENST00000374342 FAM207AQ9NSI2 230 aaPredicted RBP18.59■□□□□ 0.57
PTPN20-203ENST00000374342 KIF2AO00139 706 aaPredicted RBP18.59■□□□□ 0.57
PTPN20-203ENST00000374342 TGFB1I1O43294 461 aa18.59■□□□□ 0.57
PTPN20-203ENST00000374342 PGK2P07205 417 aa18.59■□□□□ 0.57
PTPN20-203ENST00000374342 ICAM3P32942 547 aa18.59■□□□□ 0.57
PTPN20-203ENST00000374342 SP2Q02086 613 aa18.59■□□□□ 0.57
PTPN20-203ENST00000374342 SWSAP1Q6NVH7 229 aa18.59■□□□□ 0.57
PTPN20-203ENST00000374342 ANO5Q75V66 913 aa18.59■□□□□ 0.57
PTPN20-203ENST00000374342 CYFIP1Q7L576 1253 aa18.59■□□□□ 0.57
PTPN20-203ENST00000374342 TMTC1Q8IUR5 882 aa18.59■□□□□ 0.57
PTPN20-203ENST00000374342 CCDC60Q8IWA6 550 aaPredicted RBP18.59■□□□□ 0.57
PTPN20-203ENST00000374342 CCDC155Q8N6L0 562 aa18.59■□□□□ 0.57
PTPN20-203ENST00000374342 OR8K1Q8NGG5 319 aa18.59■□□□□ 0.57
PTPN20-203ENST00000374342 AGPAT5Q9NUQ2 364 aa18.59■□□□□ 0.57
PTPN20-203ENST00000374342 LARSQ9P2J5 1176 aaKnown RBP18.59■□□□□ 0.57
PTPN20-203ENST00000374342 ZNF862O60290 1169 aa18.58■□□□□ 0.56
PTPN20-203ENST00000374342 CCDC175P0C221 793 aa18.58■□□□□ 0.56
PTPN20-203ENST00000374342 EDNRBP24530 442 aa18.58■□□□□ 0.56
PTPN20-203ENST00000374342 RPL13P26373 211 aaKnown RBP18.58■□□□□ 0.56
PTPN20-203ENST00000374342 PRKCEQ02156 737 aa18.58■□□□□ 0.56
PTPN20-203ENST00000374342 TSR1Q2NL82 804 aaKnown RBP18.58■□□□□ 0.56
PTPN20-203ENST00000374342 Q3C1V9 767 aa18.58■□□□□ 0.56
PTPN20-203ENST00000374342 FIGNQ5HY92 759 aa18.58■□□□□ 0.56
PTPN20-203ENST00000374342 MIS18BP1Q6P0N0 1132 aa18.58■□□□□ 0.56
PTPN20-203ENST00000374342 DRC1Q96MC2 740 aa18.58■□□□□ 0.56
PTPN20-203ENST00000374342 MMP19Q99542 508 aa18.58■□□□□ 0.56
PTPN20-203ENST00000374342 TIPINQ9BVW5 301 aa18.58■□□□□ 0.56
PTPN20-203ENST00000374342 MMRN2Q9H8L6 949 aa18.58■□□□□ 0.56
PTPN20-203ENST00000374342 GPRC5CQ9NQ84 441 aa18.58■□□□□ 0.56
PTPN20-203ENST00000374342 SEPT9Q9UHD8 586 aaPredicted RBP18.58■□□□□ 0.56
PTPN20-203ENST00000374342 PNMA3Q9UL41 463 aa18.58■□□□□ 0.56
PTPN20-203ENST00000374342 PCDHB13Q9Y5F0 798 aa18.58■□□□□ 0.56
PTPN20-203ENST00000374342 UQCRHLA0A096LP55 91 aa18.57■□□□□ 0.56
PTPN20-203ENST00000374342 A0A1W2PQJ5 194 aa18.57■□□□□ 0.56
PTPN20-203ENST00000374342 SLC16A3O15427 465 aaKnown RBP18.57■□□□□ 0.56
PTPN20-203ENST00000374342 DKC1O60832 514 aaKnown RBP eCLIP18.57■□□□□ 0.56
PTPN20-203ENST00000374342 UQCRHP07919 91 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms