RNA–Protein interactions for RNA: ENST00000373571.5

HDAC8-206, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-206ENST00000373571 EIF3DO15371 548 aaKnown RBP eCLIP18.3■□□□□ 0.52
HDAC8-206ENST00000373571 PPP2R5CQ13362 524 aa18.3■□□□□ 0.52
HDAC8-206ENST00000373571 MYCT1Q8N699 235 aa18.3■□□□□ 0.52
HDAC8-206ENST00000373571 RBM46Q8TBY0 533 aaKnown RBP18.3■□□□□ 0.52
HDAC8-206ENST00000373571 SLC5A5Q92911 643 aa18.3■□□□□ 0.52
HDAC8-206ENST00000373571 GCNT4Q9P109 453 aa18.3■□□□□ 0.52
HDAC8-206ENST00000373571 PACSIN2Q9UNF0 486 aaPredicted RBP18.3■□□□□ 0.52
HDAC8-206ENST00000373571 PCDHB13Q9Y5F0 798 aa18.3■□□□□ 0.52
HDAC8-206ENST00000373571 RBBP6Q7Z6E9 1792 aaKnown RBP18.3■□□□□ 0.52
HDAC8-206ENST00000373571 ZMYM2Q9UBW7 1377 aa18.3■□□□□ 0.52
HDAC8-206ENST00000373571 GOLGA6BA6NDN3 693 aa18.29■□□□□ 0.52
HDAC8-206ENST00000373571 BTNL10A8MVZ5 291 aa18.29■□□□□ 0.52
HDAC8-206ENST00000373571 AGPSO00116 658 aa18.29■□□□□ 0.52
HDAC8-206ENST00000373571 TGFB1I1O43294 461 aa18.29■□□□□ 0.52
HDAC8-206ENST00000373571 POLD1P28340 1107 aa18.29■□□□□ 0.52
HDAC8-206ENST00000373571 NMT1P30419 496 aaKnown RBP18.29■□□□□ 0.52
HDAC8-206ENST00000373571 UBXN2AP68543 259 aa18.29■□□□□ 0.52
HDAC8-206ENST00000373571 GLE1Q53GS7 698 aaKnown RBP18.29■□□□□ 0.52
HDAC8-206ENST00000373571 LEKR1Q6ZMV7 388 aa18.29■□□□□ 0.52
HDAC8-206ENST00000373571 C1orf186Q6ZWK4 172 aa18.29■□□□□ 0.52
HDAC8-206ENST00000373571 TEX2Q8IWB9 1127 aa18.29■□□□□ 0.52
HDAC8-206ENST00000373571 SUPT20HQ8NEM7 779 aa18.29■□□□□ 0.52
HDAC8-206ENST00000373571 AFAP1L1Q8TED9 768 aa18.29■□□□□ 0.52
HDAC8-206ENST00000373571 SIX2Q9NPC8 291 aa18.29■□□□□ 0.52
HDAC8-206ENST00000373571 SPDYE2BA6NHP3 402 aa18.29■□□□□ 0.52
HDAC8-206ENST00000373571 GAS7O60861 476 aa18.29■□□□□ 0.52
HDAC8-206ENST00000373571 SPDYE6P0CI01 402 aa18.29■□□□□ 0.52
HDAC8-206ENST00000373571 PRELPP51888 382 aa18.29■□□□□ 0.52
HDAC8-206ENST00000373571 EPHB4P54760 987 aa18.29■□□□□ 0.52
HDAC8-206ENST00000373571 RANBP17Q9H2T7 1088 aaKnown RBP18.29■□□□□ 0.52
HDAC8-206ENST00000373571 PARVGQ9HBI0 331 aa18.29■□□□□ 0.52
HDAC8-206ENST00000373571 FBXL5Q9UKA1 691 aa18.29■□□□□ 0.52
HDAC8-206ENST00000373571 ZBTB21Q9ULJ3 1066 aa18.29■□□□□ 0.52
HDAC8-206ENST00000373571 ZBTB39O15060 712 aa18.28■□□□□ 0.52
HDAC8-206ENST00000373571 TNFRSF8P28908 595 aa18.28■□□□□ 0.52
HDAC8-206ENST00000373571 PRKCIP41743 596 aa18.28■□□□□ 0.52
HDAC8-206ENST00000373571 SLC15A2Q16348 729 aa18.28■□□□□ 0.52
HDAC8-206ENST00000373571 EHMT1Q9H9B1 1298 aa18.28■□□□□ 0.52
HDAC8-206ENST00000373571 NAGPAQ9UK23 515 aa18.28■□□□□ 0.52
HDAC8-206ENST00000373571 AJAP1Q9UKB5 411 aaPredicted RBP18.28■□□□□ 0.52
HDAC8-206ENST00000373571 JAM2P57087 298 aa18.28■□□□□ 0.52
HDAC8-206ENST00000373571 ZC2HC1CQ53FD0 456 aaPredicted RBP18.28■□□□□ 0.52
HDAC8-206ENST00000373571 CHURC1Q8WUH1 139 aa18.28■□□□□ 0.52
HDAC8-206ENST00000373571 BORCS6Q96GS4 357 aa18.28■□□□□ 0.52
HDAC8-206ENST00000373571 IKZF4Q9H2S9 585 aa18.28■□□□□ 0.52
HDAC8-206ENST00000373571 MRPL11Q9Y3B7 192 aaKnown RBP18.28■□□□□ 0.52
HDAC8-206ENST00000373571 PSME4Q14997 1843 aa18.27■□□□□ 0.52
HDAC8-206ENST00000373571 SHTN1A0MZ66 631 aa18.27■□□□□ 0.52
HDAC8-206ENST00000373571 GTPBP10A4D1E9 387 aaKnown RBP18.27■□□□□ 0.52
HDAC8-206ENST00000373571 FLOT1O75955 427 aa18.27■□□□□ 0.52
HDAC8-206ENST00000373571 ZYXQ15942 572 aaKnown RBP18.27■□□□□ 0.52
HDAC8-206ENST00000373571 CEP55Q53EZ4 464 aa18.27■□□□□ 0.52
HDAC8-206ENST00000373571 ALKBH5Q6P6C2 394 aaKnown RBP18.27■□□□□ 0.52
HDAC8-206ENST00000373571 EMBQ6PCB8 327 aa18.27■□□□□ 0.52
HDAC8-206ENST00000373571 FAM186BQ8IYM0 893 aa18.27■□□□□ 0.52
HDAC8-206ENST00000373571 FAM151AQ8WW52 585 aa18.27■□□□□ 0.52
HDAC8-206ENST00000373571 ZFP91Q96JP5 570 aaPredicted RBP18.27■□□□□ 0.52
HDAC8-206ENST00000373571 INPP4AQ96PE3 977 aaPredicted RBP18.27■□□□□ 0.52
HDAC8-206ENST00000373571 ZNF70Q9UC06 446 aaPredicted RBP18.27■□□□□ 0.52
HDAC8-206ENST00000373571 FRMPD4Q14CM0 1322 aa18.27■□□□□ 0.51
HDAC8-206ENST00000373571 PPP1R12BO60237 982 aaPredicted RBP18.26■□□□□ 0.51
HDAC8-206ENST00000373571 VIL1P09327 827 aaKnown RBP18.26■□□□□ 0.51
HDAC8-206ENST00000373571 PSMC2P35998 433 aaKnown RBP18.26■□□□□ 0.51
HDAC8-206ENST00000373571 NFIL3Q16649 462 aa18.26■□□□□ 0.51
HDAC8-206ENST00000373571 GJB7Q6PEY0 223 aa18.26■□□□□ 0.51
HDAC8-206ENST00000373571 SAMD1Q6SPF0 538 aaPredicted RBP18.26■□□□□ 0.51
HDAC8-206ENST00000373571 ZNF577Q9BSK1 485 aa18.26■□□□□ 0.51
HDAC8-206ENST00000373571 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.26■□□□□ 0.51
HDAC8-206ENST00000373571 C21orf2O43822 256 aa18.26■□□□□ 0.51
HDAC8-206ENST00000373571 ANXA13P27216 316 aa18.26■□□□□ 0.51
HDAC8-206ENST00000373571 NOP2P46087 812 aaKnown RBP18.26■□□□□ 0.51
HDAC8-206ENST00000373571 IFI16Q16666 785 aaKnown RBP18.26■□□□□ 0.51
HDAC8-206ENST00000373571 RSBN1LQ6PCB5 846 aaPredicted RBP18.26■□□□□ 0.51
HDAC8-206ENST00000373571 VPS36Q86VN1 386 aa18.26■□□□□ 0.51
HDAC8-206ENST00000373571 DNAAF5Q86Y56 855 aa18.26■□□□□ 0.51
HDAC8-206ENST00000373571 KSR1Q8IVT5 923 aa18.26■□□□□ 0.51
HDAC8-206ENST00000373571 IFT20Q8IY31 132 aa18.26■□□□□ 0.51
HDAC8-206ENST00000373571 TAF4BQ92750 862 aa18.26■□□□□ 0.51
HDAC8-206ENST00000373571 NACC1Q96RE7 527 aa18.26■□□□□ 0.51
HDAC8-206ENST00000373571 UNC45AQ9H3U1 944 aa18.26■□□□□ 0.51
HDAC8-206ENST00000373571 VCPKMTQ9H867 229 aa18.26■□□□□ 0.51
HDAC8-206ENST00000373571 CWC15Q9P013 229 aaKnown RBP18.26■□□□□ 0.51
HDAC8-206ENST00000373571 UBE4BO95155 1302 aa18.26■□□□□ 0.51
HDAC8-206ENST00000373571 GLI1P08151 1106 aa18.25■□□□□ 0.51
HDAC8-206ENST00000373571 ARP10275 920 aa18.25■□□□□ 0.51
HDAC8-206ENST00000373571 MUTP22033 750 aa18.25■□□□□ 0.51
HDAC8-206ENST00000373571 COG2Q14746 738 aa18.25■□□□□ 0.51
HDAC8-206ENST00000373571 DLGAP5Q15398 846 aa18.25■□□□□ 0.51
HDAC8-206ENST00000373571 RPS6KA1Q15418 735 aa18.25■□□□□ 0.51
HDAC8-206ENST00000373571 FAM178BQ8IXR5 827 aa18.25■□□□□ 0.51
HDAC8-206ENST00000373571 CAVIN3Q969G5 261 aa18.25■□□□□ 0.51
HDAC8-206ENST00000373571 FIZ1Q96SL8 496 aa18.25■□□□□ 0.51
HDAC8-206ENST00000373571 WDR11Q9BZH6 1224 aa18.25■□□□□ 0.51
HDAC8-206ENST00000373571 GDF3Q9NR23 364 aa18.25■□□□□ 0.51
HDAC8-206ENST00000373571 WRAP73Q9P2S5 460 aaPredicted RBP18.25■□□□□ 0.51
HDAC8-206ENST00000373571 SEL1LQ9UBV2 794 aa18.25■□□□□ 0.51
HDAC8-206ENST00000373571 CNTNAP1P78357 1384 aa18.25■□□□□ 0.51
HDAC8-206ENST00000373571 GOLGB1Q14789 3259 aaKnown RBP18.25■□□□□ 0.51
HDAC8-206ENST00000373571 HEXIM1O94992 359 aaKnown RBP18.25■□□□□ 0.51
HDAC8-206ENST00000373571 ZNF131P52739 623 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms