RNA–Protein interactions for RNA: ENST00000373381.8

CSMD2-205, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSMD2, Length 13,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-205ENST00000373381 ENGASEQ8NFI3 743 aa9.71□□□□□ -0.85
CSMD2-205ENST00000373381 USE1Q9NZ43 259 aa9.71□□□□□ -0.85
CSMD2-205ENST00000373381 AKAP7Q9P0M2 348 aaPredicted RBP9.71□□□□□ -0.85
CSMD2-205ENST00000373381 PHKA2P46019 1235 aa9.71□□□□□ -0.85
CSMD2-205ENST00000373381 FBXO31Q5XUX0 539 aaPredicted RBP9.71□□□□□ -0.85
CSMD2-205ENST00000373381 KLHL24Q6TFL4 600 aa9.71□□□□□ -0.85
CSMD2-205ENST00000373381 JAK1P23458 1154 aa9.71□□□□□ -0.85
CSMD2-205ENST00000373381 PRIM1P49642 420 aaKnown RBP9.71□□□□□ -0.85
CSMD2-205ENST00000373381 TBC1D9BQ66K14 1250 aa9.71□□□□□ -0.85
CSMD2-205ENST00000373381 DTNAQ9Y4J8 743 aa9.71□□□□□ -0.85
CSMD2-205ENST00000373381 KRT37O76014 449 aa9.71□□□□□ -0.85
CSMD2-205ENST00000373381 C4BPBP20851 252 aa9.71□□□□□ -0.85
CSMD2-205ENST00000373381 PNMA1Q8ND90 353 aa9.71□□□□□ -0.85
CSMD2-205ENST00000373381 PYROXD1Q8WU10 500 aa9.71□□□□□ -0.85
CSMD2-205ENST00000373381 ZC3H7BQ9UGR2 993 aaKnown RBP9.71□□□□□ -0.85
CSMD2-205ENST00000373381 CAB39Q9Y376 341 aaPredicted RBP9.71□□□□□ -0.85
CSMD2-205ENST00000373381 RASGRF1Q13972 1273 aa9.71□□□□□ -0.85
CSMD2-205ENST00000373381 LRRC47Q8N1G4 583 aaKnown RBP9.71□□□□□ -0.85
CSMD2-205ENST00000373381 ANKRD44Q8N8A2 993 aa9.71□□□□□ -0.86
CSMD2-205ENST00000373381 BEST2Q8NFU1 509 aa9.71□□□□□ -0.86
CSMD2-205ENST00000373381 MRPL48Q96GC5 212 aaKnown RBP9.71□□□□□ -0.86
CSMD2-205ENST00000373381 TRIP4Q15650 581 aaPredicted RBP9.71□□□□□ -0.86
CSMD2-205ENST00000373381 CCDC92Q53HC0 331 aaPredicted RBP9.71□□□□□ -0.86
CSMD2-205ENST00000373381 OR6B2Q6IFH4 312 aa9.71□□□□□ -0.86
CSMD2-205ENST00000373381 FAF2Q96CS3 445 aa9.71□□□□□ -0.86
CSMD2-205ENST00000373381 MSTO1Q9BUK6 570 aa9.71□□□□□ -0.86
CSMD2-205ENST00000373381 BTDP43251 543 aa9.71□□□□□ -0.86
CSMD2-205ENST00000373381 PMS2P54278 862 aa9.71□□□□□ -0.86
CSMD2-205ENST00000373381 ADKP55263 362 aaKnown RBP9.71□□□□□ -0.86
CSMD2-205ENST00000373381 APBA1Q02410 837 aa9.71□□□□□ -0.86
CSMD2-205ENST00000373381 GRAMD1BQ3KR37 738 aa9.71□□□□□ -0.86
CSMD2-205ENST00000373381 CAPS2Q9BXY5 557 aa9.71□□□□□ -0.86
CSMD2-205ENST00000373381 PARD3Q8TEW0 1356 aa9.71□□□□□ -0.86
CSMD2-205ENST00000373381 H0Y626 953 aa9.71□□□□□ -0.86
CSMD2-205ENST00000373381 TRIM16O95361 564 aa9.71□□□□□ -0.86
CSMD2-205ENST00000373381 EIF2S1P05198 315 aaKnown RBP9.71□□□□□ -0.86
CSMD2-205ENST00000373381 COPS2P61201 443 aa9.71□□□□□ -0.86
CSMD2-205ENST00000373381 TMED2Q15363 201 aa9.71□□□□□ -0.86
CSMD2-205ENST00000373381 SLFN13Q68D06 897 aa9.71□□□□□ -0.86
CSMD2-205ENST00000373381 TMEM245Q9H330 911 aa9.71□□□□□ -0.86
CSMD2-205ENST00000373381 SPACA6W5XKT8 324 aa9.71□□□□□ -0.86
CSMD2-205ENST00000373381 FAM170AA1A519 330 aa9.71□□□□□ -0.86
CSMD2-205ENST00000373381 CENPUQ71F23 418 aa9.71□□□□□ -0.86
CSMD2-205ENST00000373381 TK2O00142 265 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 TRAPPC3O43617 180 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 ZMYND10O75800 440 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 FAM107AO95990 144 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 NPY2RP49146 381 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 PRAMEP78395 509 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 C10orf76Q5T2E6 689 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 CC2D2BQ6DHV5 1058 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 GCNT4Q9P109 453 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 STAP1Q9ULZ2 295 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 SYNJ1O43426 1573 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 KPNA7A9QM74 516 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 STMN3Q9NZ72 180 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 CAPN7Q9Y6W3 813 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 PJA2O43164 708 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 RPN1P04843 607 aaKnown RBP9.7□□□□□ -0.86
CSMD2-205ENST00000373381 MLNP12872 115 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 ATP6V1C1P21283 382 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 KRT17Q04695 432 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 EHD2Q9NZN4 543 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 EXOC1LA0A1B0GW35 172 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 BUB1O43683 1085 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 TJP3O95049 919 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 BRAFP15056 766 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 LAMC2Q13753 1193 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 UNC45AQ9H3U1 944 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 VPS54Q9P1Q0 977 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 WDR47O94967 919 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 SPICE1Q8N0Z3 855 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 KAT6AQ92794 2004 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 MYLK2Q9H1R3 596 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 INTS9Q9NV88 658 aaKnown RBP9.7□□□□□ -0.86
CSMD2-205ENST00000373381 HSPA4LO95757 839 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 ZNF235Q14590 738 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 EEPD1Q7L9B9 569 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 HSPH1Q92598 858 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 TP53BP2Q13625 1128 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 TOGARAM2Q6ZUX3 1019 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 HDDC2Q7Z4H3 204 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 ZNF438Q7Z4V0 828 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 EML4Q9HC35 981 aaKnown RBP9.7□□□□□ -0.86
CSMD2-205ENST00000373381 POTEFA5A3E0 1075 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 MAP3K13O43283 966 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 KCNA2P16389 499 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 PPP3CCP48454 512 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 DYNC1I2Q13409 638 aaKnown RBP9.7□□□□□ -0.86
CSMD2-205ENST00000373381 CNOT10Q9H9A5 744 aaKnown RBP9.7□□□□□ -0.86
CSMD2-205ENST00000373381 NDE1Q9NXR1 346 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 MAGI1Q96QZ7 1491 aaPredicted RBP9.7□□□□□ -0.86
CSMD2-205ENST00000373381 CYP4F22Q6NT55 531 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 FAM196AQ6ZSG2 479 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 ASAP3Q8TDY4 903 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 KLHL29Q96CT2 875 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 NUP85Q9BW27 656 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 NOS1P29475 1434 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 ITPRIPL1Q6GPH6 555 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 ARHGAP18Q8N392 663 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms